RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 FAM220AQ7Z4H9 259 aa19.64■□□□□ 0.73
ATG4D-209ENST00000588857 ZNF420Q8TAQ5 688 aaPredicted RBP19.64■□□□□ 0.73
ATG4D-209ENST00000588857 UFD1Q92890 307 aa19.64■□□□□ 0.73
ATG4D-209ENST00000588857 NELFAQ9H3P2 528 aa19.64■□□□□ 0.73
ATG4D-209ENST00000588857 ASF1BQ9NVP2 202 aa19.64■□□□□ 0.73
ATG4D-209ENST00000588857 UPB1Q9UBR1 384 aa19.64■□□□□ 0.73
ATG4D-209ENST00000588857 IKZF2Q9UKS7 526 aa19.64■□□□□ 0.73
ATG4D-209ENST00000588857 EMC9Q9Y3B6 208 aa19.64■□□□□ 0.73
ATG4D-209ENST00000588857 CPEP16870 476 aa19.63■□□□□ 0.73
ATG4D-209ENST00000588857 NPR2P20594 1047 aa19.63■□□□□ 0.73
ATG4D-209ENST00000588857 TGFBR2P37173 567 aa19.63■□□□□ 0.73
ATG4D-209ENST00000588857 GBX2P52951 348 aaPredicted RBP19.63■□□□□ 0.73
ATG4D-209ENST00000588857 BDH1Q02338 343 aa19.63■□□□□ 0.73
ATG4D-209ENST00000588857 CEACAM16Q2WEN9 425 aa19.63■□□□□ 0.73
ATG4D-209ENST00000588857 KCTD18Q6PI47 426 aaPredicted RBP19.63■□□□□ 0.73
ATG4D-209ENST00000588857 GFRALQ6UXV0 394 aa19.63■□□□□ 0.73
ATG4D-209ENST00000588857 CD163Q86VB7 1156 aa19.63■□□□□ 0.73
ATG4D-209ENST00000588857 P2RY8Q86VZ1 359 aa19.63■□□□□ 0.73
ATG4D-209ENST00000588857 EGFL6Q8IUX8 553 aa19.63■□□□□ 0.73
ATG4D-209ENST00000588857 LINC00346Q8IVM7 164 aa19.63■□□□□ 0.73
ATG4D-209ENST00000588857 UBE2J2Q8N2K1 259 aa19.63■□□□□ 0.73
ATG4D-209ENST00000588857 C9orf106Q8NAJ2 232 aa19.63■□□□□ 0.73
ATG4D-209ENST00000588857 OR2AJ1Q8NGZ0 328 aa19.63■□□□□ 0.73
ATG4D-209ENST00000588857 ZNF837Q96EG3 531 aaPredicted RBP19.63■□□□□ 0.73
ATG4D-209ENST00000588857 C12orf49Q9H741 205 aa19.63■□□□□ 0.73
ATG4D-209ENST00000588857 SLC7A10Q9NS82 523 aa19.63■□□□□ 0.73
ATG4D-209ENST00000588857 RSL24D1Q9UHA3 163 aaKnown RBP19.63■□□□□ 0.73
ATG4D-209ENST00000588857 ZGRF1Q86YA3 2104 aa19.63■□□□□ 0.73
ATG4D-209ENST00000588857 METTL15A6NJ78 407 aa19.62■□□□□ 0.73
ATG4D-209ENST00000588857 ZNF587BE7ETH6 402 aa19.62■□□□□ 0.73
ATG4D-209ENST00000588857 PSMD9O00233 223 aa19.62■□□□□ 0.73
ATG4D-209ENST00000588857 SULT1C4O75897 302 aa19.62■□□□□ 0.73
ATG4D-209ENST00000588857 LALBAP00709 142 aa19.62■□□□□ 0.73
ATG4D-209ENST00000588857 TMBIM6P55061 237 aa19.62■□□□□ 0.73
ATG4D-209ENST00000588857 TAS2R43P59537 309 aa19.62■□□□□ 0.73
ATG4D-209ENST00000588857 LSM6P62312 80 aaKnown RBP19.62■□□□□ 0.73
ATG4D-209ENST00000588857 MRPS34P82930 218 aaKnown RBP19.62■□□□□ 0.73
ATG4D-209ENST00000588857 TPBGQ13641 420 aa19.62■□□□□ 0.73
ATG4D-209ENST00000588857 PRR30Q53SZ7 412 aaPredicted RBP19.62■□□□□ 0.73
ATG4D-209ENST00000588857 LIPKQ5VXJ0 399 aa19.62■□□□□ 0.73
ATG4D-209ENST00000588857 LINGO2Q7L985 606 aa19.62■□□□□ 0.73
ATG4D-209ENST00000588857 DCXRQ7Z4W1 244 aa19.62■□□□□ 0.73
ATG4D-209ENST00000588857 ANKRD13BQ86YJ7 626 aa19.62■□□□□ 0.73
ATG4D-209ENST00000588857 GCNT2Q8N0V5 402 aa19.62■□□□□ 0.73
ATG4D-209ENST00000588857 ISOC1Q96CN7 298 aa19.62■□□□□ 0.73
ATG4D-209ENST00000588857 ABHD6Q9BV23 337 aa19.62■□□□□ 0.73
ATG4D-209ENST00000588857 CYB5R1Q9UHQ9 305 aa19.62■□□□□ 0.73
ATG4D-209ENST00000588857 NCOA6Q14686 2063 aaPredicted RBP19.62■□□□□ 0.73
ATG4D-209ENST00000588857 PRR32B1ATL7 298 aa19.61■□□□□ 0.73
ATG4D-209ENST00000588857 HOXD4P09016 255 aaPredicted RBP19.61■□□□□ 0.73
ATG4D-209ENST00000588857 EDNRAP25101 427 aa19.61■□□□□ 0.73
ATG4D-209ENST00000588857 SSX1Q16384 188 aa19.61■□□□□ 0.73
ATG4D-209ENST00000588857 ZNF684Q5T5D7 378 aa19.61■□□□□ 0.73
ATG4D-209ENST00000588857 C1orf185Q5T7R7 199 aa19.61■□□□□ 0.73
ATG4D-209ENST00000588857 CORO6Q6QEF8 472 aa19.61■□□□□ 0.73
ATG4D-209ENST00000588857 FAM214BQ7L5A3 538 aa19.61■□□□□ 0.73
ATG4D-209ENST00000588857 KRT77Q7Z794 578 aa19.61■□□□□ 0.73
ATG4D-209ENST00000588857 PHC2Q8IXK0 858 aa19.61■□□□□ 0.73
ATG4D-209ENST00000588857 YIPF7Q8N8F6 280 aa19.61■□□□□ 0.73
ATG4D-209ENST00000588857 ZFP41Q8N8Y5 198 aa19.61■□□□□ 0.73
ATG4D-209ENST00000588857 OR52N5Q8NH56 324 aa19.61■□□□□ 0.73
ATG4D-209ENST00000588857 HTRA1Q92743 480 aa19.61■□□□□ 0.73
ATG4D-209ENST00000588857 PELI1Q96FA3 418 aa19.61■□□□□ 0.73
ATG4D-209ENST00000588857 AMELYQ99218 206 aa19.61■□□□□ 0.73
ATG4D-209ENST00000588857 MROQ9BYG7 248 aa19.61■□□□□ 0.73
ATG4D-209ENST00000588857 NAA50Q9GZZ1 169 aaKnown RBP19.61■□□□□ 0.73
ATG4D-209ENST00000588857 ACOXLQ9NUZ1 547 aa19.61■□□□□ 0.73
ATG4D-209ENST00000588857 MRM2Q9UI43 246 aaKnown RBP19.61■□□□□ 0.73
ATG4D-209ENST00000588857 PNMA8CA0A1B0GUJ8 204 aa19.61■□□□□ 0.73
ATG4D-209ENST00000588857 TTLL8A6PVC2 850 aa19.61■□□□□ 0.73
ATG4D-209ENST00000588857 PRRG2O14669 202 aa19.61■□□□□ 0.73
ATG4D-209ENST00000588857 OR8G3PP0DMU2 310 aa19.61■□□□□ 0.73
ATG4D-209ENST00000588857 PER3P56645 1201 aa19.61■□□□□ 0.73
ATG4D-209ENST00000588857 STK11Q15831 433 aa19.61■□□□□ 0.73
ATG4D-209ENST00000588857 ABHD12BQ7Z5M8 362 aaPredicted RBP19.61■□□□□ 0.73
ATG4D-209ENST00000588857 HAVCR2Q8TDQ0 301 aa19.61■□□□□ 0.73
ATG4D-209ENST00000588857 RAB2BQ8WUD1 216 aa19.61■□□□□ 0.73
ATG4D-209ENST00000588857 NABP1Q96AH0 204 aa19.61■□□□□ 0.73
ATG4D-209ENST00000588857 OR8B4Q96RC9 309 aa19.61■□□□□ 0.73
ATG4D-209ENST00000588857 FOXB1Q99853 325 aa19.61■□□□□ 0.73
ATG4D-209ENST00000588857 ZNF416Q9BWM5 594 aa19.61■□□□□ 0.73
ATG4D-209ENST00000588857 C1orf198Q9H425 327 aa19.61■□□□□ 0.73
ATG4D-209ENST00000588857 SIAEQ9HAT2 523 aa19.61■□□□□ 0.73
ATG4D-209ENST00000588857 TMEM38BQ9NVV0 291 aa19.61■□□□□ 0.73
ATG4D-209ENST00000588857 NDUFB11Q9NX14 153 aa19.61■□□□□ 0.73
ATG4D-209ENST00000588857 ENPP5Q9UJA9 477 aa19.61■□□□□ 0.73
ATG4D-209ENST00000588857 LHFPL6Q9Y693 200 aa19.61■□□□□ 0.73
ATG4D-209ENST00000588857 RP1L1Q8IWN7 2480 aaPredicted RBP19.6■□□□□ 0.73
ATG4D-209ENST00000588857 MBD3L4A6NDZ8 208 aaPredicted RBP19.6■□□□□ 0.73
ATG4D-209ENST00000588857 MBD3L3A6NE82 208 aaPredicted RBP19.6■□□□□ 0.73
ATG4D-209ENST00000588857 MBD3L5A6NJ08 208 aaPredicted RBP19.6■□□□□ 0.73
ATG4D-209ENST00000588857 RPL36A-HNRNPH2H7BZ11 118 aa19.6■□□□□ 0.73
ATG4D-209ENST00000588857 ZNF701M0R085 212 aaPredicted RBP19.6■□□□□ 0.73
ATG4D-209ENST00000588857 CELP19835 753 aa19.6■□□□□ 0.73
ATG4D-209ENST00000588857 GTF2A1P52655 376 aaPredicted RBP19.6■□□□□ 0.73
ATG4D-209ENST00000588857 SIRPAP78324 504 aa19.6■□□□□ 0.73
ATG4D-209ENST00000588857 ROM1Q03395 351 aa19.6■□□□□ 0.73
ATG4D-209ENST00000588857 SPATC1Q76KD6 591 aa19.6■□□□□ 0.73
ATG4D-209ENST00000588857 ZNF679Q8IYX0 411 aa19.6■□□□□ 0.73
ATG4D-209ENST00000588857 CNEP1R1Q8N9A8 125 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms