RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 FAM221AA4D161 298 aa16.5■□□□□ 0.23
CLPTM1-209ENST00000588855 CECR9P0C854 216 aa16.5■□□□□ 0.23
CLPTM1-209ENST00000588855 SLC2A5P22732 501 aa16.5■□□□□ 0.23
CLPTM1-209ENST00000588855 ARR3P36575 388 aa16.5■□□□□ 0.23
CLPTM1-209ENST00000588855 CDC42P60953 191 aa16.5■□□□□ 0.23
CLPTM1-209ENST00000588855 TLE4Q04727 773 aa16.5■□□□□ 0.23
CLPTM1-209ENST00000588855 SPOCK1Q08629 439 aa16.5■□□□□ 0.23
CLPTM1-209ENST00000588855 KLHL12Q53G59 568 aa16.5■□□□□ 0.23
CLPTM1-209ENST00000588855 TMEM53Q6P2H8 277 aa16.5■□□□□ 0.23
CLPTM1-209ENST00000588855 DPPA2Q7Z7J5 298 aa16.5■□□□□ 0.23
CLPTM1-209ENST00000588855 FAM169BQ8N8A8 192 aa16.5■□□□□ 0.23
CLPTM1-209ENST00000588855 ZNF511Q8NB15 262 aa16.5■□□□□ 0.23
CLPTM1-209ENST00000588855 OR10H5Q8NGA6 315 aa16.5■□□□□ 0.23
CLPTM1-209ENST00000588855 C14orf79Q96F83 325 aa16.5■□□□□ 0.23
CLPTM1-209ENST00000588855 MS4A3Q96HJ5 214 aa16.5■□□□□ 0.23
CLPTM1-209ENST00000588855 ESRP2Q9H6T0 727 aaKnown RBP16.5■□□□□ 0.23
CLPTM1-209ENST00000588855 MOV10Q9HCE1 1003 aaKnown RBP16.5■□□□□ 0.23
CLPTM1-209ENST00000588855 POLR1DQ9Y2S0 133 aa16.5■□□□□ 0.23
CLPTM1-209ENST00000588855 GMPPBQ9Y5P6 360 aa16.5■□□□□ 0.23
CLPTM1-209ENST00000588855 C12orf71A8MTZ7 269 aa16.5■□□□□ 0.23
CLPTM1-209ENST00000588855 PRODHO43272 600 aa16.5■□□□□ 0.23
CLPTM1-209ENST00000588855 CTAG2O75638 210 aa16.5■□□□□ 0.23
CLPTM1-209ENST00000588855 GLCEO94923 617 aa16.5■□□□□ 0.23
CLPTM1-209ENST00000588855 GOSR1O95249 250 aa16.5■□□□□ 0.23
CLPTM1-209ENST00000588855 ZNF14P17017 642 aaPredicted RBP16.5■□□□□ 0.23
CLPTM1-209ENST00000588855 PAX7P23759 505 aa16.5■□□□□ 0.23
CLPTM1-209ENST00000588855 CD40P25942 277 aa16.5■□□□□ 0.23
CLPTM1-209ENST00000588855 NR1H2P55055 460 aa16.5■□□□□ 0.23
CLPTM1-209ENST00000588855 LSM6P62312 80 aaKnown RBP16.5■□□□□ 0.23
CLPTM1-209ENST00000588855 RAB39AQ14964 217 aa16.5■□□□□ 0.23
CLPTM1-209ENST00000588855 TMEM108Q6UXF1 575 aa16.5■□□□□ 0.23
CLPTM1-209ENST00000588855 ZNF584Q8IVC4 421 aa16.5■□□□□ 0.23
CLPTM1-209ENST00000588855 ZMYND19Q96E35 227 aaPredicted RBP16.5■□□□□ 0.23
CLPTM1-209ENST00000588855 IMPAD1Q9NX62 359 aa16.5■□□□□ 0.23
CLPTM1-209ENST00000588855 ASH2LQ9UBL3 628 aa16.5■□□□□ 0.23
CLPTM1-209ENST00000588855 MOKQ9UQ07 419 aa16.5■□□□□ 0.23
CLPTM1-209ENST00000588855 LHFPL6Q9Y693 200 aa16.5■□□□□ 0.23
CLPTM1-209ENST00000588855 COMMD3-BMI1R4GMX3 469 aa16.5■□□□□ 0.23
CLPTM1-209ENST00000588855 LOC100130705A0A1B0GUX0 176 aa16.49■□□□□ 0.23
CLPTM1-209ENST00000588855 ABCD4O14678 606 aa16.49■□□□□ 0.23
CLPTM1-209ENST00000588855 PSKH1P11801 424 aa16.49■□□□□ 0.23
CLPTM1-209ENST00000588855 PRF1P14222 555 aa16.49■□□□□ 0.23
CLPTM1-209ENST00000588855 PTAFRP25105 342 aa16.49■□□□□ 0.23
CLPTM1-209ENST00000588855 FMO3P31513 532 aa16.49■□□□□ 0.23
CLPTM1-209ENST00000588855 RPS27P42677 84 aaKnown RBP16.49■□□□□ 0.23
CLPTM1-209ENST00000588855 PSG4Q00888 419 aa16.49■□□□□ 0.23
CLPTM1-209ENST00000588855 AQP6Q13520 282 aa16.49■□□□□ 0.23
CLPTM1-209ENST00000588855 APOFQ13790 326 aa16.49■□□□□ 0.23
CLPTM1-209ENST00000588855 C3orf36Q3SXR2 165 aa16.49■□□□□ 0.23
CLPTM1-209ENST00000588855 PABPC1L2AQ5JQF8 200 aa16.49■□□□□ 0.23
CLPTM1-209ENST00000588855 FBXW10Q5XX13 1052 aa16.49■□□□□ 0.23
CLPTM1-209ENST00000588855 B3GLCTQ6Y288 498 aa16.49■□□□□ 0.23
CLPTM1-209ENST00000588855 AKR7LQ8NHP1 331 aa16.49■□□□□ 0.23
CLPTM1-209ENST00000588855 UBE2FQ969M7 185 aa16.49■□□□□ 0.23
CLPTM1-209ENST00000588855 OR2H1Q9GZK4 316 aa16.49■□□□□ 0.23
CLPTM1-209ENST00000588855 VCXQ9H320 206 aa16.49■□□□□ 0.23
CLPTM1-209ENST00000588855 WDR76Q9H967 626 aa16.49■□□□□ 0.23
CLPTM1-209ENST00000588855 RASSF1Q9NS23 344 aa16.49■□□□□ 0.23
CLPTM1-209ENST00000588855 ABCA12Q86UK0 2595 aa16.48■□□□□ 0.23
CLPTM1-209ENST00000588855 APCP25054 2843 aa16.48■□□□□ 0.23
CLPTM1-209ENST00000588855 A0A1W2PPR1 153 aa16.48■□□□□ 0.23
CLPTM1-209ENST00000588855 CCDC182A6NF36 153 aa16.48■□□□□ 0.23
CLPTM1-209ENST00000588855 SLC16A6O15403 523 aa16.48■□□□□ 0.23
CLPTM1-209ENST00000588855 PLAUP00749 431 aa16.48■□□□□ 0.23
CLPTM1-209ENST00000588855 CD3EP07766 207 aa16.48■□□□□ 0.23
CLPTM1-209ENST00000588855 PCBD1P61457 104 aa16.48■□□□□ 0.23
CLPTM1-209ENST00000588855 RPS7P62081 194 aaKnown RBP16.48■□□□□ 0.23
CLPTM1-209ENST00000588855 ADAM8P78325 824 aa16.48■□□□□ 0.23
CLPTM1-209ENST00000588855 AADACL4Q5VUY2 407 aa16.48■□□□□ 0.23
CLPTM1-209ENST00000588855 NXNL2Q5VZ03 156 aa16.48■□□□□ 0.23
CLPTM1-209ENST00000588855 ADAM5Q6NVV9 412 aa16.48■□□□□ 0.23
CLPTM1-209ENST00000588855 SYT9Q86SS6 491 aa16.48■□□□□ 0.23
CLPTM1-209ENST00000588855 TMEM200AQ86VY9 491 aa16.48■□□□□ 0.23
CLPTM1-209ENST00000588855 LINC00346Q8IVM7 164 aa16.48■□□□□ 0.23
CLPTM1-209ENST00000588855 ZNF555Q8NEP9 628 aa16.48■□□□□ 0.23
CLPTM1-209ENST00000588855 OR8J1Q8NGP2 316 aa16.48■□□□□ 0.23
CLPTM1-209ENST00000588855 WNT5BQ9H1J7 359 aa16.48■□□□□ 0.23
CLPTM1-209ENST00000588855 ROS1P08922 2347 aa16.47■□□□□ 0.23
CLPTM1-209ENST00000588855 ZNF823P16415 610 aa16.47■□□□□ 0.23
CLPTM1-209ENST00000588855 GSTT1P30711 240 aa16.47■□□□□ 0.23
CLPTM1-209ENST00000588855 SSTR2P30874 369 aa16.47■□□□□ 0.23
CLPTM1-209ENST00000588855 BLVRAP53004 296 aa16.47■□□□□ 0.23
CLPTM1-209ENST00000588855 SCRN3Q0VDG4 424 aa16.47■□□□□ 0.23
CLPTM1-209ENST00000588855 KEAP1Q14145 624 aa16.47■□□□□ 0.23
CLPTM1-209ENST00000588855 SLC35D3Q5M8T2 416 aa16.47■□□□□ 0.23
CLPTM1-209ENST00000588855 ZNF774Q6NX45 483 aa16.47■□□□□ 0.23
CLPTM1-209ENST00000588855 CORO6Q6QEF8 472 aa16.47■□□□□ 0.23
CLPTM1-209ENST00000588855 PIAS4Q8N2W9 510 aaPredicted RBP16.47■□□□□ 0.23
CLPTM1-209ENST00000588855 CPEB3Q8NE35 698 aaKnown RBP16.47■□□□□ 0.23
CLPTM1-209ENST00000588855 KBTBD8Q8NFY9 601 aa16.47■□□□□ 0.23
CLPTM1-209ENST00000588855 CYGBQ8WWM9 190 aa16.47■□□□□ 0.23
CLPTM1-209ENST00000588855 TMEM204Q9BSN7 226 aa16.47■□□□□ 0.23
CLPTM1-209ENST00000588855 WACQ9BTA9 647 aa16.47■□□□□ 0.23
CLPTM1-209ENST00000588855 CLEC4MQ9H2X3 399 aaPredicted RBP16.47■□□□□ 0.23
CLPTM1-209ENST00000588855 FBXL3Q9UKT7 428 aa16.47■□□□□ 0.23
CLPTM1-209ENST00000588855 RNF115Q9Y4L5 304 aa16.47■□□□□ 0.23
CLPTM1-209ENST00000588855 TIMM10BQ9Y5J6 103 aa16.47■□□□□ 0.23
CLPTM1-209ENST00000588855 CLIC3O95833 236 aa16.46■□□□□ 0.23
CLPTM1-209ENST00000588855 SERPINA5P05154 406 aa16.46■□□□□ 0.23
CLPTM1-209ENST00000588855 CALCRP30988 508 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms