RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 C2orf92A0A1B0GVN3 265 aa8.73□□□□□ -1.01
LINC01539-201ENST00000587904 OR2M5A3KFT3 312 aa8.73□□□□□ -1.01
LINC01539-201ENST00000587904 TMEM200CA6NKL6 621 aa8.73□□□□□ -1.01
LINC01539-201ENST00000587904 CDC42EP2O14613 210 aa8.73□□□□□ -1.01
LINC01539-201ENST00000587904 FADS1O60427 444 aa8.73□□□□□ -1.01
LINC01539-201ENST00000587904 CSO75390 466 aaKnown RBP8.73□□□□□ -1.01
LINC01539-201ENST00000587904 OR2A4O95047 310 aa8.73□□□□□ -1.01
LINC01539-201ENST00000587904 NGFRP08138 427 aa8.73□□□□□ -1.01
LINC01539-201ENST00000587904 OR8G3PP0DMU2 310 aa8.73□□□□□ -1.01
LINC01539-201ENST00000587904 TBXA2RP21731 343 aa8.73□□□□□ -1.01
LINC01539-201ENST00000587904 SOX3P41225 446 aa8.73□□□□□ -1.01
LINC01539-201ENST00000587904 TNFRSF9Q07011 255 aa8.73□□□□□ -1.01
LINC01539-201ENST00000587904 TRA2AQ13595 282 aaKnown RBP eCLIP8.73□□□□□ -1.01
LINC01539-201ENST00000587904 RNASE10Q5GAN6 216 aaKnown RBP8.73□□□□□ -1.01
LINC01539-201ENST00000587904 VWA2Q5GFL6 755 aa8.73□□□□□ -1.01
LINC01539-201ENST00000587904 CLEC12AQ5QGZ9 265 aa8.73□□□□□ -1.01
LINC01539-201ENST00000587904 PRAMEF17Q5VTA0 474 aa8.73□□□□□ -1.01
LINC01539-201ENST00000587904 FNDC7Q5VTL7 733 aa8.73□□□□□ -1.01
LINC01539-201ENST00000587904 C1orf189Q5VU69 101 aa8.73□□□□□ -1.01
LINC01539-201ENST00000587904 SLC30A6Q6NXT4 461 aa8.73□□□□□ -1.01
LINC01539-201ENST00000587904 ARHGAP11AQ6P4F7 1023 aa8.73□□□□□ -1.01
LINC01539-201ENST00000587904 LINC00114Q6XXX2 140 aa8.73□□□□□ -1.01
LINC01539-201ENST00000587904 GID4Q8IVV7 300 aa8.73□□□□□ -1.01
LINC01539-201ENST00000587904 EID2Q8N6I1 236 aa8.73□□□□□ -1.01
LINC01539-201ENST00000587904 DTWD2Q8NBA8 298 aa8.73□□□□□ -1.01
LINC01539-201ENST00000587904 OR4Q3Q8NH05 313 aa8.73□□□□□ -1.01
LINC01539-201ENST00000587904 OR4C3Q8NH37 302 aa8.73□□□□□ -1.01
LINC01539-201ENST00000587904 PFN4Q8NHR9 129 aa8.73□□□□□ -1.01
LINC01539-201ENST00000587904 GRHL3Q8TE85 626 aa8.73□□□□□ -1.01
LINC01539-201ENST00000587904 CCDC74BQ96LY2 380 aa8.73□□□□□ -1.01
LINC01539-201ENST00000587904 OR2A7Q96R45 310 aa8.73□□□□□ -1.01
LINC01539-201ENST00000587904 OR6C1Q96RD1 312 aa8.73□□□□□ -1.01
LINC01539-201ENST00000587904 ATF6BQ99941 703 aa8.73□□□□□ -1.01
LINC01539-201ENST00000587904 DPH1Q9BZG8 443 aa8.73□□□□□ -1.01
LINC01539-201ENST00000587904 NXF5Q9H1B4 397 aaKnown RBP8.73□□□□□ -1.01
LINC01539-201ENST00000587904 OR52D1Q9H346 318 aa8.73□□□□□ -1.01
LINC01539-201ENST00000587904 UBQLN3Q9H347 655 aa8.73□□□□□ -1.01
LINC01539-201ENST00000587904 TAS2R16Q9NYV7 291 aa8.73□□□□□ -1.01
LINC01539-201ENST00000587904 PIPOXQ9P0Z9 390 aa8.73□□□□□ -1.01
LINC01539-201ENST00000587904 EXOSC1Q9Y3B2 195 aaKnown RBP8.73□□□□□ -1.01
LINC01539-201ENST00000587904 PI4KAP42356 2102 aa8.72□□□□□ -1.01
LINC01539-201ENST00000587904 UNC13CQ8NB66 2214 aa8.72□□□□□ -1.01
LINC01539-201ENST00000587904 ASXL3Q9C0F0 2248 aa8.72□□□□□ -1.01
LINC01539-201ENST00000587904 A0A1W2PQD3 144 aa8.72□□□□□ -1.01
LINC01539-201ENST00000587904 CIDEAO60543 219 aa8.72□□□□□ -1.01
LINC01539-201ENST00000587904 SCRG1O75711 98 aa8.72□□□□□ -1.01
LINC01539-201ENST00000587904 NTN1O95631 604 aa8.72□□□□□ -1.01
LINC01539-201ENST00000587904 OR4E1P0C645 316 aa8.72□□□□□ -1.01
LINC01539-201ENST00000587904 CPN1P15169 458 aa8.72□□□□□ -1.01
LINC01539-201ENST00000587904 CPEP16870 476 aa8.72□□□□□ -1.01
LINC01539-201ENST00000587904 MAKP20794 623 aa8.72□□□□□ -1.01
LINC01539-201ENST00000587904 HOXC12P31275 282 aa8.72□□□□□ -1.01
LINC01539-201ENST00000587904 SLC6A8P48029 635 aa8.72□□□□□ -1.01
LINC01539-201ENST00000587904 MTNR1AP48039 350 aa8.72□□□□□ -1.01
LINC01539-201ENST00000587904 TOMM34Q15785 309 aaPredicted RBP8.72□□□□□ -1.01
LINC01539-201ENST00000587904 NKAIN1Q4KMZ8 207 aa8.72□□□□□ -1.01
LINC01539-201ENST00000587904 SMARCD3Q6STE5 483 aa8.72□□□□□ -1.01
LINC01539-201ENST00000587904 KIRREL2Q6UWL6 708 aa8.72□□□□□ -1.01
LINC01539-201ENST00000587904 SPNS3Q6ZMD2 512 aa8.72□□□□□ -1.01
LINC01539-201ENST00000587904 MEX3DQ86XN8 651 aaKnown RBP8.72□□□□□ -1.01
LINC01539-201ENST00000587904 BEND2Q8NDZ0 799 aa8.72□□□□□ -1.01
LINC01539-201ENST00000587904 OR52I1Q8NGK6 324 aa8.72□□□□□ -1.01
LINC01539-201ENST00000587904 STT3BQ8TCJ2 826 aa8.72□□□□□ -1.01
LINC01539-201ENST00000587904 S100PBPQ96BU1 408 aa8.72□□□□□ -1.01
LINC01539-201ENST00000587904 SAMD8Q96LT4 415 aa8.72□□□□□ -1.01
LINC01539-201ENST00000587904 NUDT9Q9BW91 350 aa8.72□□□□□ -1.01
LINC01539-201ENST00000587904 SEC11CQ9BY50 192 aa8.72□□□□□ -1.01
LINC01539-201ENST00000587904 WWTR1Q9GZV5 400 aa8.72□□□□□ -1.01
LINC01539-201ENST00000587904 TSPAN10Q9H1Z9 355 aaPredicted RBP8.72□□□□□ -1.01
LINC01539-201ENST00000587904 MEPEQ9NQ76 525 aaPredicted RBP8.72□□□□□ -1.01
LINC01539-201ENST00000587904 C20orf141Q9NUB4 165 aa8.72□□□□□ -1.01
LINC01539-201ENST00000587904 FBXL3Q9UKT7 428 aa8.72□□□□□ -1.01
LINC01539-201ENST00000587904 SIGLEC7Q9Y286 467 aa8.72□□□□□ -1.01
LINC01539-201ENST00000587904 RP1P56715 2156 aa8.72□□□□□ -1.01
LINC01539-201ENST00000587904 A0A087WUJ7 227 aa8.71□□□□□ -1.01
LINC01539-201ENST00000587904 TMEM129A0AVI4 362 aa8.71□□□□□ -1.01
LINC01539-201ENST00000587904 ZNF593O00488 134 aaPredicted RBP8.71□□□□□ -1.01
LINC01539-201ENST00000587904 BHLHE40O14503 412 aa8.71□□□□□ -1.01
LINC01539-201ENST00000587904 KHDRBS3O75525 346 aaKnown RBP8.71□□□□□ -1.01
LINC01539-201ENST00000587904 UTS2O95399 124 aa8.71□□□□□ -1.01
LINC01539-201ENST00000587904 PNMTP11086 282 aa8.71□□□□□ -1.01
LINC01539-201ENST00000587904 IL12BP29460 328 aa8.71□□□□□ -1.01
LINC01539-201ENST00000587904 HTR1FP30939 366 aa8.71□□□□□ -1.01
LINC01539-201ENST00000587904 FGF9P31371 208 aaPredicted RBP8.71□□□□□ -1.01
LINC01539-201ENST00000587904 SUCLG1P53597 346 aaKnown RBP8.71□□□□□ -1.01
LINC01539-201ENST00000587904 HCCSP53701 268 aa8.71□□□□□ -1.01
LINC01539-201ENST00000587904 CDH11P55287 796 aa8.71□□□□□ -1.01
LINC01539-201ENST00000587904 SKP2Q13309 424 aa8.71□□□□□ -1.01
LINC01539-201ENST00000587904 IL11RAQ14626 422 aa8.71□□□□□ -1.01
LINC01539-201ENST00000587904 TRIM61Q5EBN2 209 aa8.71□□□□□ -1.01
LINC01539-201ENST00000587904 PYY3Q5JQD4 70 aa8.71□□□□□ -1.01
LINC01539-201ENST00000587904 LIPKQ5VXJ0 399 aa8.71□□□□□ -1.01
LINC01539-201ENST00000587904 WBP2NLQ6ICG8 309 aa8.71□□□□□ -1.01
LINC01539-201ENST00000587904 CLEC2AQ6UVW9 174 aa8.71□□□□□ -1.01
LINC01539-201ENST00000587904 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.71□□□□□ -1.01
LINC01539-201ENST00000587904 PPP1R3BQ86XI6 285 aa8.71□□□□□ -1.01
LINC01539-201ENST00000587904 C9orf40Q8IXQ3 194 aa8.71□□□□□ -1.01
LINC01539-201ENST00000587904 ZNF321PQ8N8H1 164 aa8.71□□□□□ -1.01
LINC01539-201ENST00000587904 ZNF441Q8N8Z8 693 aa8.71□□□□□ -1.01
LINC01539-201ENST00000587904 TMEM185AQ8NFB2 350 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms