RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 KCNS2Q9ULS6 477 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 SIGLEC7Q9Y286 467 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 ADAM18Q9Y3Q7 739 aa10.63□□□□□ -0.71
SS18-225ENST00000585121 CR1P17927 2039 aa10.62□□□□□ -0.71
SS18-225ENST00000585121 RTTNQ86VV8 2226 aa10.62□□□□□ -0.71
SS18-225ENST00000585121 IGHV4-61A0A0C4DH41 118 aa10.62□□□□□ -0.71
SS18-225ENST00000585121 TEX13CA0A0J9YWL9 993 aa10.62□□□□□ -0.71
SS18-225ENST00000585121 LOC100289279A0A1B0GTE1 492 aa10.62□□□□□ -0.71
SS18-225ENST00000585121 ZNF16P17020 682 aaPredicted RBP10.62□□□□□ -0.71
SS18-225ENST00000585121 SDHAP31040 664 aa10.62□□□□□ -0.71
SS18-225ENST00000585121 MSX2P35548 267 aaPredicted RBP10.62□□□□□ -0.71
SS18-225ENST00000585121 OMPP47874 163 aa10.62□□□□□ -0.71
SS18-225ENST00000585121 LIMS1P48059 325 aa10.62□□□□□ -0.71
SS18-225ENST00000585121 ARHGDIAP52565 204 aa10.62□□□□□ -0.71
SS18-225ENST00000585121 SCRN3Q0VDG4 424 aa10.62□□□□□ -0.71
SS18-225ENST00000585121 KRR1Q13601 381 aaKnown RBP10.62□□□□□ -0.71
SS18-225ENST00000585121 PCGF3Q3KNV8 242 aa10.62□□□□□ -0.71
SS18-225ENST00000585121 FAM166AQ6J272 317 aa10.62□□□□□ -0.71
SS18-225ENST00000585121 SMARCD3Q6STE5 483 aa10.62□□□□□ -0.71
SS18-225ENST00000585121 UGT2A3Q6UWM9 527 aa10.62□□□□□ -0.71
SS18-225ENST00000585121 DPY19L2P2Q6ZN68 376 aa10.62□□□□□ -0.71
SS18-225ENST00000585121 FOXL2NBQ6ZUU3 175 aa10.62□□□□□ -0.71
SS18-225ENST00000585121 ADCK1Q86TW2 530 aa10.62□□□□□ -0.71
SS18-225ENST00000585121 PRIMA1Q86XR5 153 aa10.62□□□□□ -0.71
SS18-225ENST00000585121 BTBD10Q9BSF8 475 aa10.62□□□□□ -0.71
SS18-225ENST00000585121 BEX2Q9BXY8 128 aa10.62□□□□□ -0.71
SS18-225ENST00000585121 RERGLQ9H628 205 aa10.62□□□□□ -0.71
SS18-225ENST00000585121 CHODLQ9H9P2 273 aa10.62□□□□□ -0.71
SS18-225ENST00000585121 ELOVL3Q9HB03 270 aa10.62□□□□□ -0.71
SS18-225ENST00000585121 NRIP3Q9NQ35 241 aa10.62□□□□□ -0.71
SS18-225ENST00000585121 HINT3Q9NQE9 182 aaKnown RBP10.62□□□□□ -0.71
SS18-225ENST00000585121 POLE4Q9NR33 117 aa10.62□□□□□ -0.71
SS18-225ENST00000585121 TMEM160Q9NX00 188 aa10.62□□□□□ -0.71
SS18-225ENST00000585121 MYEF2Q9P2K5 600 aaKnown RBP10.62□□□□□ -0.71
SS18-225ENST00000585121 RRP15Q9Y3B9 282 aaKnown RBP10.62□□□□□ -0.71
SS18-225ENST00000585121 IER3IP1Q9Y5U9 82 aa10.62□□□□□ -0.71
SS18-225ENST00000585121 OR10H3O60404 316 aa10.61□□□□□ -0.71
SS18-225ENST00000585121 LMX1BO60663 402 aa10.61□□□□□ -0.71
SS18-225ENST00000585121 KHDRBS3O75525 346 aaKnown RBP10.61□□□□□ -0.71
SS18-225ENST00000585121 CLPTM1O96005 669 aa10.61□□□□□ -0.71
SS18-225ENST00000585121 IGFBP1P08833 259 aaPredicted RBP10.61□□□□□ -0.71
SS18-225ENST00000585121 NAT2P11245 290 aa10.61□□□□□ -0.71
SS18-225ENST00000585121 SEC23BQ15437 767 aa10.61□□□□□ -0.71
SS18-225ENST00000585121 ALKBH6Q3KRA9 238 aa10.61□□□□□ -0.71
SS18-225ENST00000585121 MESTQ5EB52 335 aa10.61□□□□□ -0.71
SS18-225ENST00000585121 FAM122BQ7Z309 247 aa10.61□□□□□ -0.71
SS18-225ENST00000585121 RASD2Q96D21 266 aa10.61□□□□□ -0.71
SS18-225ENST00000585121 POM121L2Q96KW2 1035 aa10.61□□□□□ -0.71
SS18-225ENST00000585121 GPX7Q96SL4 187 aaPredicted RBP10.61□□□□□ -0.71
SS18-225ENST00000585121 ZNF416Q9BWM5 594 aa10.61□□□□□ -0.71
SS18-225ENST00000585121 SHARPINQ9H0F6 387 aa10.61□□□□□ -0.71
SS18-225ENST00000585121 WNT5BQ9H1J7 359 aa10.61□□□□□ -0.71
SS18-225ENST00000585121 NDRG4Q9ULP0 352 aaKnown RBP10.61□□□□□ -0.71
SS18-225ENST00000585121 IGLV3-9A0A075B6K5 115 aa10.6□□□□□ -0.71
SS18-225ENST00000585121 LOC100509620A0A075B734 347 aa10.6□□□□□ -0.71
SS18-225ENST00000585121 PLSCR5A0PG75 271 aa10.6□□□□□ -0.71
SS18-225ENST00000585121 C17orf100A8MU93 164 aa10.6□□□□□ -0.71
SS18-225ENST00000585121 B2RBV5 119 aa10.6□□□□□ -0.71
SS18-225ENST00000585121 LYNX1G3V0Z9 82 aa10.6□□□□□ -0.71
SS18-225ENST00000585121 SOCS2O14508 198 aa10.6□□□□□ -0.71
SS18-225ENST00000585121 TPD52L2O43399 206 aaKnown RBP10.6□□□□□ -0.71
SS18-225ENST00000585121 SLC16A7O60669 478 aa10.6□□□□□ -0.71
SS18-225ENST00000585121 HPXP02790 462 aa10.6□□□□□ -0.71
SS18-225ENST00000585121 SEMG1P04279 462 aa10.6□□□□□ -0.71
SS18-225ENST00000585121 TACSTD2P09758 323 aa10.6□□□□□ -0.71
SS18-225ENST00000585121 LYNX1P0DP58 116 aa10.6□□□□□ -0.71
SS18-225ENST00000585121 ZNF26P17031 533 aaPredicted RBP10.6□□□□□ -0.71
SS18-225ENST00000585121 HNF1AP20823 631 aa10.6□□□□□ -0.71
SS18-225ENST00000585121 ACHEP22303 614 aa10.6□□□□□ -0.71
SS18-225ENST00000585121 CRABP1P29762 137 aa10.6□□□□□ -0.71
SS18-225ENST00000585121 SLC6A6P31641 620 aa10.6□□□□□ -0.71
SS18-225ENST00000585121 GPR6P46095 362 aaPredicted RBP10.6□□□□□ -0.71
SS18-225ENST00000585121 TMEM33P57088 247 aa10.6□□□□□ -0.71
SS18-225ENST00000585121 ERVS71-1P61550 626 aa10.6□□□□□ -0.71
SS18-225ENST00000585121 MRPS11P82912 194 aaKnown RBP10.6□□□□□ -0.71
SS18-225ENST00000585121 TEKQ02763 1124 aa10.6□□□□□ -0.71
SS18-225ENST00000585121 RIN1Q13671 783 aa10.6□□□□□ -0.71
SS18-225ENST00000585121 ZNF774Q6NX45 483 aa10.6□□□□□ -0.71
SS18-225ENST00000585121 DNM1P34Q6PK57 102 aa10.6□□□□□ -0.71
SS18-225ENST00000585121 JAZF1Q86VZ6 243 aa10.6□□□□□ -0.71
SS18-225ENST00000585121 ZDHHC21Q8IVQ6 265 aa10.6□□□□□ -0.71
SS18-225ENST00000585121 GLB1L2Q8IW92 636 aa10.6□□□□□ -0.71
SS18-225ENST00000585121 ARHGAP24Q8N264 748 aa10.6□□□□□ -0.71
SS18-225ENST00000585121 FANK1Q8TC84 345 aa10.6□□□□□ -0.71
SS18-225ENST00000585121 HPS1Q92902 700 aa10.6□□□□□ -0.71
SS18-225ENST00000585121 MSI2Q96DH6 328 aaKnown RBP10.6□□□□□ -0.71
SS18-225ENST00000585121 MMADHCQ9H3L0 296 aaPredicted RBP10.6□□□□□ -0.71
SS18-225ENST00000585121 EMC7Q9NPA0 242 aa10.6□□□□□ -0.71
SS18-225ENST00000585121 IL1RAPQ9NPH3 570 aa10.6□□□□□ -0.71
SS18-225ENST00000585121 DECR2Q9NUI1 292 aa10.6□□□□□ -0.71
SS18-225ENST00000585121 TAS2R1Q9NYW7 299 aa10.6□□□□□ -0.71
SS18-225ENST00000585121 VSX1Q9NZR4 365 aaPredicted RBP10.6□□□□□ -0.71
SS18-225ENST00000585121 IL20RAQ9UHF4 553 aa10.6□□□□□ -0.71
SS18-225ENST00000585121 KIAA1324LA8MWY0 1029 aaPredicted RBP10.59□□□□□ -0.71
SS18-225ENST00000585121 ANKRD65E5RJM6 399 aa10.59□□□□□ -0.71
SS18-225ENST00000585121 GYG2O15488 501 aa10.59□□□□□ -0.71
SS18-225ENST00000585121 SGCEO43556 437 aa10.59□□□□□ -0.71
SS18-225ENST00000585121 KRT36O76013 467 aa10.59□□□□□ -0.71
SS18-225ENST00000585121 TGFAP01135 160 aa10.59□□□□□ -0.71
SS18-225ENST00000585121 IGHV3-13P01766 116 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms