RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 TTMPQ5BVD1 217 aa10.64□□□□□ -0.71
SS18-219ENST00000581570 C10orf128Q5T292 105 aa10.64□□□□□ -0.71
SS18-219ENST00000581570 REEP3Q6NUK4 255 aa10.64□□□□□ -0.71
SS18-219ENST00000581570 SLC27A4Q6P1M0 643 aa10.64□□□□□ -0.71
SS18-219ENST00000581570 TTC33Q6PID6 262 aaPredicted RBP10.64□□□□□ -0.71
SS18-219ENST00000581570 NOXO1Q8NFA2 376 aa10.64□□□□□ -0.71
SS18-219ENST00000581570 DYRK2Q92630 601 aa10.64□□□□□ -0.71
SS18-219ENST00000581570 NABP1Q96AH0 204 aa10.64□□□□□ -0.71
SS18-219ENST00000581570 C4orf45Q96LM5 186 aa10.64□□□□□ -0.71
SS18-219ENST00000581570 MCHR1Q99705 422 aa10.64□□□□□ -0.71
SS18-219ENST00000581570 NUDT16L1Q9BRJ7 211 aaKnown RBP10.64□□□□□ -0.71
SS18-219ENST00000581570 PAIP1Q9H074 479 aaKnown RBP10.64□□□□□ -0.71
SS18-219ENST00000581570 TMEM165Q9HC07 324 aa10.64□□□□□ -0.71
SS18-219ENST00000581570 SLCO1B3Q9NPD5 702 aa10.64□□□□□ -0.71
SS18-219ENST00000581570 MAN2C1Q9NTJ4 1040 aa10.64□□□□□ -0.71
SS18-219ENST00000581570 IL19Q9UHD0 177 aa10.64□□□□□ -0.71
SS18-219ENST00000581570 CENPBD1B2RD01 187 aa10.63□□□□□ -0.71
SS18-219ENST00000581570 MCIDASD6RGH6 385 aa10.63□□□□□ -0.71
SS18-219ENST00000581570 G3V4G9 280 aa10.63□□□□□ -0.71
SS18-219ENST00000581570 BLOC1S5-TXNDC5H3BN57 136 aa10.63□□□□□ -0.71
SS18-219ENST00000581570 CHP2O43745 196 aa10.63□□□□□ -0.71
SS18-219ENST00000581570 ICMTO60725 284 aa10.63□□□□□ -0.71
SS18-219ENST00000581570 TRMUO75648 421 aaKnown RBP10.63□□□□□ -0.71
SS18-219ENST00000581570 ZNF205O95201 554 aa10.63□□□□□ -0.71
SS18-219ENST00000581570 SLC2A10O95528 541 aa10.63□□□□□ -0.71
SS18-219ENST00000581570 PRB2P02812 416 aaPredicted RBP10.63□□□□□ -0.71
SS18-219ENST00000581570 THRBP10828 461 aa10.63□□□□□ -0.71
SS18-219ENST00000581570 UMPSP11172 480 aa10.63□□□□□ -0.71
SS18-219ENST00000581570 ACADSP16219 412 aa10.63□□□□□ -0.71
SS18-219ENST00000581570 BGNP21810 368 aa10.63□□□□□ -0.71
SS18-219ENST00000581570 ZNF133P52736 654 aaPredicted RBP10.63□□□□□ -0.71
SS18-219ENST00000581570 FGF12P61328 243 aa10.63□□□□□ -0.71
SS18-219ENST00000581570 ERVK-25P63136 954 aa10.63□□□□□ -0.71
SS18-219ENST00000581570 CDK6Q00534 326 aa10.63□□□□□ -0.71
SS18-219ENST00000581570 C2orf68Q2NKX9 166 aa10.63□□□□□ -0.71
SS18-219ENST00000581570 GCNT6Q5T4J0 391 aa10.63□□□□□ -0.71
SS18-219ENST00000581570 RUSC1-AS1Q66K80 236 aa10.63□□□□□ -0.71
SS18-219ENST00000581570 NXNQ6DKJ4 435 aa10.63□□□□□ -0.71
SS18-219ENST00000581570 ZNF613Q6PF04 617 aa10.63□□□□□ -0.71
SS18-219ENST00000581570 ARL9Q6T311 187 aa10.63□□□□□ -0.71
SS18-219ENST00000581570 Q6ZR03 302 aa10.63□□□□□ -0.71
SS18-219ENST00000581570 ALDH16A1Q8IZ83 802 aa10.63□□□□□ -0.71
SS18-219ENST00000581570 TBC1D15Q8TC07 691 aa10.63□□□□□ -0.71
SS18-219ENST00000581570 SSMEM1Q8WWF3 244 aa10.63□□□□□ -0.71
SS18-219ENST00000581570 GTF2H4Q92759 462 aa10.63□□□□□ -0.71
SS18-219ENST00000581570 NEIL1Q96FI4 390 aaPredicted RBP10.63□□□□□ -0.71
SS18-219ENST00000581570 OR2V2Q96R30 315 aa10.63□□□□□ -0.71
SS18-219ENST00000581570 ZNF607Q96SK3 696 aa10.63□□□□□ -0.71
SS18-219ENST00000581570 SEPHS2Q99611 448 aa10.63□□□□□ -0.71
SS18-219ENST00000581570 ROPN1BQ9BZX4 212 aaPredicted RBP10.63□□□□□ -0.71
SS18-219ENST00000581570 OR2H1Q9GZK4 316 aa10.63□□□□□ -0.71
SS18-219ENST00000581570 WNT5BQ9H1J7 359 aa10.63□□□□□ -0.71
SS18-219ENST00000581570 EVA1AQ9H8M9 152 aa10.63□□□□□ -0.71
SS18-219ENST00000581570 ROPN1Q9HAT0 212 aaPredicted RBP10.63□□□□□ -0.71
SS18-219ENST00000581570 GCM1Q9NP62 436 aa10.63□□□□□ -0.71
SS18-219ENST00000581570 ZIM2Q9NZV7 527 aa10.63□□□□□ -0.71
SS18-219ENST00000581570 ZNF229Q9UJW7 825 aa10.63□□□□□ -0.71
SS18-219ENST00000581570 UGT2A1Q9Y4X1 527 aa10.63□□□□□ -0.71
SS18-219ENST00000581570 TANC2Q9HCD6 1990 aa10.63□□□□□ -0.71
SS18-219ENST00000581570 KMT2CQ8NEZ4 4911 aaKnown RBP10.62□□□□□ -0.71
SS18-219ENST00000581570 A0A1W2PRG6 482 aa10.62□□□□□ -0.71
SS18-219ENST00000581570 C5orf63A6NC05 138 aa10.62□□□□□ -0.71
SS18-219ENST00000581570 IFNL4K9M1U5 179 aa10.62□□□□□ -0.71
SS18-219ENST00000581570 KPNA4O00629 521 aaPredicted RBP10.62□□□□□ -0.71
SS18-219ENST00000581570 TNFRSF13BO14836 293 aaPredicted RBP10.62□□□□□ -0.71
SS18-219ENST00000581570 GPR137BO60478 399 aa10.62□□□□□ -0.71
SS18-219ENST00000581570 FMO6PO60774 539 aa10.62□□□□□ -0.71
SS18-219ENST00000581570 SERPINB7O75635 380 aa10.62□□□□□ -0.71
SS18-219ENST00000581570 F13BP05160 661 aa10.62□□□□□ -0.71
SS18-219ENST00000581570 CSF1P09603 554 aa10.62□□□□□ -0.71
SS18-219ENST00000581570 ASAH2BP0C7U1 165 aa10.62□□□□□ -0.71
SS18-219ENST00000581570 GSTM3P21266 225 aa10.62□□□□□ -0.71
SS18-219ENST00000581570 MMP16P51512 607 aa10.62□□□□□ -0.71
SS18-219ENST00000581570 POLR2JP52435 117 aaKnown RBP10.62□□□□□ -0.71
SS18-219ENST00000581570 HDDC2Q7Z4H3 204 aa10.62□□□□□ -0.71
SS18-219ENST00000581570 NANOGNBQ7Z5D8 188 aa10.62□□□□□ -0.71
SS18-219ENST00000581570 FITM2Q8N6M3 262 aa10.62□□□□□ -0.71
SS18-219ENST00000581570 OR8B3Q8NGG8 313 aa10.62□□□□□ -0.71
SS18-219ENST00000581570 ASB10Q8WXI3 467 aa10.62□□□□□ -0.71
SS18-219ENST00000581570 NSMAFQ92636 917 aa10.62□□□□□ -0.71
SS18-219ENST00000581570 MAGEB18Q96M61 343 aa10.62□□□□□ -0.71
SS18-219ENST00000581570 OR8B2Q96RD0 313 aa10.62□□□□□ -0.71
SS18-219ENST00000581570 TMEM246Q9BRR3 403 aa10.62□□□□□ -0.71
SS18-219ENST00000581570 IGKV1D-43A0A0B4J1Z2 117 aa10.61□□□□□ -0.71
SS18-219ENST00000581570 TRPC5OSA6NMA1 111 aa10.61□□□□□ -0.71
SS18-219ENST00000581570 CPSF4LA6NMK7 179 aaKnown RBP10.61□□□□□ -0.71
SS18-219ENST00000581570 M0R3H8 397 aa10.61□□□□□ -0.71
SS18-219ENST00000581570 HDAC3O15379 428 aa10.61□□□□□ -0.71
SS18-219ENST00000581570 ABHD16AO95870 558 aa10.61□□□□□ -0.71
SS18-219ENST00000581570 CYB5R3P00387 301 aaPredicted RBP10.61□□□□□ -0.71
SS18-219ENST00000581570 KITLGP21583 273 aa10.61□□□□□ -0.71
SS18-219ENST00000581570 AQP1P29972 269 aa10.61□□□□□ -0.71
SS18-219ENST00000581570 PITPNBP48739 271 aa10.61□□□□□ -0.71
SS18-219ENST00000581570 DAP3P51398 398 aaKnown RBP10.61□□□□□ -0.71
SS18-219ENST00000581570 UGT2B15P54855 530 aa10.61□□□□□ -0.71
SS18-219ENST00000581570 SCARB2Q14108 478 aa10.61□□□□□ -0.71
SS18-219ENST00000581570 FAM189A2Q15884 450 aa10.61□□□□□ -0.71
SS18-219ENST00000581570 RUNDC3AQ59EK9 446 aa10.61□□□□□ -0.71
SS18-219ENST00000581570 KPRPQ5T749 579 aaPredicted RBP10.61□□□□□ -0.71
SS18-219ENST00000581570 FAM27BQ5VT28 67 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms