RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 DUSP18Q8NEJ0 188 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 VN1R2Q8NFZ6 395 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 OR4F15Q8NGB8 312 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 OR2AP1Q8NGE2 309 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 OR10R2Q8NGX6 335 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 OR6K2Q8NGY2 324 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 OR9G1Q8NH87 305 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 TMEM239Q8WW34 195 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 ARPC1AQ92747 370 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 DYNLL2Q96FJ2 89 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 CPB2Q96IY4 423 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 C18orf12Q96KH6 178 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 SCGB3A2Q96PL1 93 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 RANBP9Q96S59 729 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 P2RX4Q99571 388 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 ZNF184Q99676 751 aaPredicted RBP1.61□□□□□ -2.15
CHD3-217ENST00000574022 GPR21Q99679 349 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 KRTAP4-12Q9BQ66 201 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 TIMM29Q9BSF4 260 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 COPS4Q9BT78 406 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 MED10Q9BTT4 135 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 KRTAP4-6Q9BYQ5 205 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 UPF3BQ9BZI7 483 aaKnown RBP1.61□□□□□ -2.15
CHD3-217ENST00000574022 POLR2J2Q9GZM3 115 aaKnown RBP1.61□□□□□ -2.15
CHD3-217ENST00000574022 POLR2J3Q9H1A7 115 aaKnown RBP1.61□□□□□ -2.15
CHD3-217ENST00000574022 Q9H3A6 140 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 OR2S2Q9NQN1 319 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 ABCB10Q9NRK6 738 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 AIG1Q9NVV5 245 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 NKIRAS1Q9NYS0 192 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 SLC17A7Q9P2U7 560 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 XCL2Q9UBD3 114 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 NXT1Q9UKK6 140 aaKnown RBP1.61□□□□□ -2.15
CHD3-217ENST00000574022 MOB4Q9Y3A3 225 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 TNFRSF18Q9Y5U5 241 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 RLFQ13129 1914 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 CFAP65Q6ZU64 1925 aaKnown RBP1.61□□□□□ -2.15
CHD3-217ENST00000574022 MYO3BQ8WXR4 1341 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 MAPK8IP3Q9UPT6 1336 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 ARID1BQ8NFD5 2236 aaPredicted RBP1.6□□□□□ -2.15
CHD3-217ENST00000574022 LRPPRCP42704 1394 aaKnown RBP1.6□□□□□ -2.15
CHD3-217ENST00000574022 A0A0B4J2A0 478 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 C1orf232A0A0U1RR37 186 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 A0A1B0GVI7 797 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 ANKRD20A5PA0PJZ0 165 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 NDUFAF8A1L188 74 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 TVP23AA6NH52 213 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 FAM166BA8MTA8 275 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 SEC14L6B5MCN3 397 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 F8VP50 259 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 RNASEK-C17orf49H0YIS7 233 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 H7C2Y5 167 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 H7C423 109 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 GOLGA8RI6L899 631 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 ERI3O43414 337 aaKnown RBP1.6□□□□□ -2.15
CHD3-217ENST00000574022 SNAI2O43623 268 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 EDIL3O43854 480 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 ZNF780AO75290 641 aaPredicted RBP1.6□□□□□ -2.15
CHD3-217ENST00000574022 TRAPPC6AO75865 159 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 SRP72O76094 671 aaKnown RBP1.6□□□□□ -2.15
CHD3-217ENST00000574022 AQP8O94778 261 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 LDOC1O95751 146 aaPredicted RBP1.6□□□□□ -2.15
CHD3-217ENST00000574022 HPRT1P00492 218 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 OXTP01178 125 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 IGHV3-48P01763 117 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 HPNP05981 417 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 GKN3PP0CG01 181 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 PNMA6AP0CW24 399 aaPredicted RBP1.6□□□□□ -2.15
CHD3-217ENST00000574022 GFAPP14136 432 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 TCP1P17987 556 aaKnown RBP1.6□□□□□ -2.15
CHD3-217ENST00000574022 PGAM1P18669 254 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 GGT1P19440 569 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 RAB4AP20338 218 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 RAB5AP20339 215 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 ZP3P21754 424 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 COX7A1P24310 79 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 GDF1P27539 372 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 PSMB6P28072 239 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 PCK1P35558 622 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 P2RY2P41231 377 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 RANBP1P43487 201 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 OR3A4PP47883 348 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 APOC4P55056 127 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 PLTPP55058 493 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 AP1S2P56377 157 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 ZNF121P58317 390 aaPredicted RBP1.6□□□□□ -2.15
CHD3-217ENST00000574022 TAS2R19P59542 299 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 TAS2R60P59551 318 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 VSNL1P62760 191 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 RPS21P63220 83 aaKnown RBP1.6□□□□□ -2.15
CHD3-217ENST00000574022 PAFAH1B2P68402 229 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 MXD1Q05195 221 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 IFFO1Q0D2I5 559 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 SLAMF1Q13291 335 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 SLC39A6Q13433 755 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 FZD2Q14332 565 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 MAD2L1BPQ15013 274 aaPredicted RBP1.6□□□□□ -2.15
CHD3-217ENST00000574022 MAPRE2Q15555 327 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 SLC1A5Q15758 541 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 ZNF726P1Q15940 193 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms