RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 ZNF607Q96SK3 696 aa8.63□□□□□ -1.03
CTDNEP1-202ENST00000570380 SIAEQ9HAT2 523 aa8.63□□□□□ -1.03
CTDNEP1-202ENST00000570380 CACYBPQ9HB71 228 aaKnown RBP8.63□□□□□ -1.03
CTDNEP1-202ENST00000570380 CCNB1IP1Q9NPC3 277 aa8.63□□□□□ -1.03
CTDNEP1-202ENST00000570380 MAN2C1Q9NTJ4 1040 aa8.63□□□□□ -1.03
CTDNEP1-202ENST00000570380 VPREB3Q9UKI3 123 aa8.63□□□□□ -1.03
CTDNEP1-202ENST00000570380 SIGLEC9Q9Y336 463 aa8.63□□□□□ -1.03
CTDNEP1-202ENST00000570380 A0A0B4J2E0 115 aa8.62□□□□□ -1.03
CTDNEP1-202ENST00000570380 A0A1B0GX12 115 aa8.62□□□□□ -1.03
CTDNEP1-202ENST00000570380 IFNL4K9M1U5 179 aa8.62□□□□□ -1.03
CTDNEP1-202ENST00000570380 PHYHO14832 338 aa8.62□□□□□ -1.03
CTDNEP1-202ENST00000570380 SURF4O15260 269 aa8.62□□□□□ -1.03
CTDNEP1-202ENST00000570380 PPP1R3DO95685 299 aa8.62□□□□□ -1.03
CTDNEP1-202ENST00000570380 KITLGP21583 273 aa8.62□□□□□ -1.03
CTDNEP1-202ENST00000570380 IL12AP29459 219 aa8.62□□□□□ -1.03
CTDNEP1-202ENST00000570380 CDAP32320 146 aa8.62□□□□□ -1.03
CTDNEP1-202ENST00000570380 TGFBR2P37173 567 aa8.62□□□□□ -1.03
CTDNEP1-202ENST00000570380 ZNF84P51523 738 aa8.62□□□□□ -1.03
CTDNEP1-202ENST00000570380 NME5P56597 212 aa8.62□□□□□ -1.03
CTDNEP1-202ENST00000570380 CLRN1P58418 232 aa8.62□□□□□ -1.03
CTDNEP1-202ENST00000570380 UFM1P61960 85 aa8.62□□□□□ -1.03
CTDNEP1-202ENST00000570380 ERVK-25P63136 954 aa8.62□□□□□ -1.03
CTDNEP1-202ENST00000570380 CKAP4Q07065 602 aaKnown RBP8.62□□□□□ -1.03
CTDNEP1-202ENST00000570380 PTOV1Q86YD1 416 aa8.62□□□□□ -1.03
CTDNEP1-202ENST00000570380 LYG1Q8N1E2 194 aa8.62□□□□□ -1.03
CTDNEP1-202ENST00000570380 GALNT4Q8N4A0 578 aa8.62□□□□□ -1.03
CTDNEP1-202ENST00000570380 PIP4P2Q8N4L2 257 aa8.62□□□□□ -1.03
CTDNEP1-202ENST00000570380 SCCPDHQ8NBX0 429 aa8.62□□□□□ -1.03
CTDNEP1-202ENST00000570380 NABP1Q96AH0 204 aa8.62□□□□□ -1.03
CTDNEP1-202ENST00000570380 C4orf45Q96LM5 186 aa8.62□□□□□ -1.03
CTDNEP1-202ENST00000570380 TMEM43Q9BTV4 400 aa8.62□□□□□ -1.03
CTDNEP1-202ENST00000570380 MRPL13Q9BYD1 178 aaKnown RBP8.62□□□□□ -1.03
CTDNEP1-202ENST00000570380 SIRPDQ9H106 197 aa8.62□□□□□ -1.03
CTDNEP1-202ENST00000570380 WNT5BQ9H1J7 359 aa8.62□□□□□ -1.03
CTDNEP1-202ENST00000570380 KCNN2Q9H2S1 579 aa8.62□□□□□ -1.03
CTDNEP1-202ENST00000570380 ELOVL3Q9HB03 270 aa8.62□□□□□ -1.03
CTDNEP1-202ENST00000570380 BCL2L10Q9HD36 194 aa8.62□□□□□ -1.03
CTDNEP1-202ENST00000570380 USH1CQ9Y6N9 552 aa8.62□□□□□ -1.03
CTDNEP1-202ENST00000570380 TENM2Q9NT68 2774 aa8.62□□□□□ -1.03
CTDNEP1-202ENST00000570380 RNF13O43567 381 aa8.61□□□□□ -1.03
CTDNEP1-202ENST00000570380 TPST1O60507 370 aa8.61□□□□□ -1.03
CTDNEP1-202ENST00000570380 TPST2O60704 377 aa8.61□□□□□ -1.03
CTDNEP1-202ENST00000570380 FSTL3O95633 263 aa8.61□□□□□ -1.03
CTDNEP1-202ENST00000570380 MT-ATP6P00846 226 aa8.61□□□□□ -1.03
CTDNEP1-202ENST00000570380 IGHG1P01857 330 aa8.61□□□□□ -1.03
CTDNEP1-202ENST00000570380 SHBGP04278 402 aa8.61□□□□□ -1.03
CTDNEP1-202ENST00000570380 NUDT7P0C024 238 aa8.61□□□□□ -1.03
CTDNEP1-202ENST00000570380 SLC6A2P23975 617 aa8.61□□□□□ -1.03
CTDNEP1-202ENST00000570380 GABRA5P31644 462 aa8.61□□□□□ -1.03
CTDNEP1-202ENST00000570380 SERPINB5P36952 375 aa8.61□□□□□ -1.03
CTDNEP1-202ENST00000570380 ERFP50548 548 aa8.61□□□□□ -1.03
CTDNEP1-202ENST00000570380 ARHGDIAP52565 204 aa8.61□□□□□ -1.03
CTDNEP1-202ENST00000570380 ZNF133P52736 654 aaPredicted RBP8.61□□□□□ -1.03
CTDNEP1-202ENST00000570380 EFNB2P52799 333 aa8.61□□□□□ -1.03
CTDNEP1-202ENST00000570380 CDH12P55289 794 aa8.61□□□□□ -1.03
CTDNEP1-202ENST00000570380 MRPS34P82930 218 aaKnown RBP8.61□□□□□ -1.03
CTDNEP1-202ENST00000570380 COX10Q12887 443 aa8.61□□□□□ -1.03
CTDNEP1-202ENST00000570380 TAF11Q15544 211 aa8.61□□□□□ -1.03
CTDNEP1-202ENST00000570380 OR1Q1Q15612 314 aa8.61□□□□□ -1.03
CTDNEP1-202ENST00000570380 DEFB121Q5J5C9 76 aa8.61□□□□□ -1.03
CTDNEP1-202ENST00000570380 CEP85LQ5SZL2 805 aa8.61□□□□□ -1.03
CTDNEP1-202ENST00000570380 C10orf128Q5T292 105 aa8.61□□□□□ -1.03
CTDNEP1-202ENST00000570380 VASH1Q7L8A9 365 aaPredicted RBP8.61□□□□□ -1.03
CTDNEP1-202ENST00000570380 PDZD9Q8IXQ8 264 aa8.61□□□□□ -1.03
CTDNEP1-202ENST00000570380 CMBLQ96DG6 245 aa8.61□□□□□ -1.03
CTDNEP1-202ENST00000570380 MAGEB18Q96M61 343 aa8.61□□□□□ -1.03
CTDNEP1-202ENST00000570380 SEPHS2Q99611 448 aa8.61□□□□□ -1.03
CTDNEP1-202ENST00000570380 WFDC6Q9BQY6 131 aa8.61□□□□□ -1.03
CTDNEP1-202ENST00000570380 TXLNGYQ9BZA5 131 aa8.61□□□□□ -1.03
CTDNEP1-202ENST00000570380 OR2H1Q9GZK4 316 aa8.61□□□□□ -1.03
CTDNEP1-202ENST00000570380 MMP28Q9H239 520 aa8.61□□□□□ -1.03
CTDNEP1-202ENST00000570380 SEMA6AQ9H2E6 1030 aa8.61□□□□□ -1.03
CTDNEP1-202ENST00000570380 TPT1P8Q9HAU6 139 aa8.61□□□□□ -1.03
CTDNEP1-202ENST00000570380 SELENONQ9NZV5 590 aa8.61□□□□□ -1.03
CTDNEP1-202ENST00000570380 SLC17A7Q9P2U7 560 aa8.61□□□□□ -1.03
CTDNEP1-202ENST00000570380 UGT2A1Q9Y4X1 527 aa8.61□□□□□ -1.03
CTDNEP1-202ENST00000570380 IGKV1D-43A0A0B4J1Z2 117 aa8.6□□□□□ -1.03
CTDNEP1-202ENST00000570380 IGHV3-64DA0A0J9YX35 117 aa8.6□□□□□ -1.03
CTDNEP1-202ENST00000570380 SMIM23A6NLE4 172 aa8.6□□□□□ -1.03
CTDNEP1-202ENST00000570380 RFXANKO14593 260 aa8.6□□□□□ -1.03
CTDNEP1-202ENST00000570380 SLC2A10O95528 541 aa8.6□□□□□ -1.03
CTDNEP1-202ENST00000570380 LIPFP07098 398 aa8.6□□□□□ -1.03
CTDNEP1-202ENST00000570380 FAM153BP0C7A2 387 aa8.6□□□□□ -1.03
CTDNEP1-202ENST00000570380 GSTM3P21266 225 aa8.6□□□□□ -1.03
CTDNEP1-202ENST00000570380 EPHA3P29320 983 aa8.6□□□□□ -1.03
CTDNEP1-202ENST00000570380 PRKAR1BP31321 381 aa8.6□□□□□ -1.03
CTDNEP1-202ENST00000570380 PSMB10P40306 273 aa8.6□□□□□ -1.03
CTDNEP1-202ENST00000570380 PMELP40967 661 aa8.6□□□□□ -1.03
CTDNEP1-202ENST00000570380 LRRC74AQ0VAA2 488 aa8.6□□□□□ -1.03
CTDNEP1-202ENST00000570380 SGCAQ16586 387 aa8.6□□□□□ -1.03
CTDNEP1-202ENST00000570380 ZNF74Q16587 644 aa8.6□□□□□ -1.03
CTDNEP1-202ENST00000570380 ZNF181Q2M3W8 571 aa8.6□□□□□ -1.03
CTDNEP1-202ENST00000570380 NSUN5P1Q3KNT7 163 aa8.6□□□□□ -1.03
CTDNEP1-202ENST00000570380 METTL11BQ5VVY1 283 aa8.6□□□□□ -1.03
CTDNEP1-202ENST00000570380 LINC00114Q6XXX2 140 aa8.6□□□□□ -1.03
CTDNEP1-202ENST00000570380 DCDC5Q6ZRR9 648 aa8.6□□□□□ -1.03
CTDNEP1-202ENST00000570380 C1orf122Q6ZSJ8 110 aa8.6□□□□□ -1.03
CTDNEP1-202ENST00000570380 ATG16L2Q8NAA4 619 aa8.6□□□□□ -1.03
CTDNEP1-202ENST00000570380 NOXO1Q8NFA2 376 aa8.6□□□□□ -1.03
CTDNEP1-202ENST00000570380 MAL2Q969L2 176 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms