RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 PGAM4Q8N0Y7 254 aa12.51□□□□□ -0.41
FANCA-220ENST00000566409 ICA1LQ8NDH6 482 aa12.51□□□□□ -0.41
FANCA-220ENST00000566409 RDH5Q92781 318 aa12.51□□□□□ -0.41
FANCA-220ENST00000566409 MARS2Q96GW9 593 aaKnown RBP12.51□□□□□ -0.41
FANCA-220ENST00000566409 C1orf159Q96HA4 380 aa12.51□□□□□ -0.41
FANCA-220ENST00000566409 PYURFQ96I23 114 aa12.51□□□□□ -0.41
FANCA-220ENST00000566409 CDRT15Q96T59 188 aa12.51□□□□□ -0.41
FANCA-220ENST00000566409 BEX2Q9BXY8 128 aa12.51□□□□□ -0.41
FANCA-220ENST00000566409 RACGAP1Q9H0H5 632 aa12.51□□□□□ -0.41
FANCA-220ENST00000566409 NRIP3Q9NQ35 241 aa12.51□□□□□ -0.41
FANCA-220ENST00000566409 FAM32AQ9Y421 112 aaKnown RBP12.51□□□□□ -0.41
FANCA-220ENST00000566409 TIMM10BQ9Y5J6 103 aa12.51□□□□□ -0.41
FANCA-220ENST00000566409 TEX13CA0A0J9YWL9 993 aa12.5□□□□□ -0.41
FANCA-220ENST00000566409 ICMTO60725 284 aa12.5□□□□□ -0.41
FANCA-220ENST00000566409 NDUFB2O95178 105 aa12.5□□□□□ -0.41
FANCA-220ENST00000566409 MSR1P21757 451 aa12.5□□□□□ -0.41
FANCA-220ENST00000566409 MPV17P39210 176 aa12.5□□□□□ -0.41
FANCA-220ENST00000566409 CCL8P80075 99 aa12.5□□□□□ -0.41
FANCA-220ENST00000566409 GLO1Q04760 184 aa12.5□□□□□ -0.41
FANCA-220ENST00000566409 SPATA46Q5T0L3 261 aa12.5□□□□□ -0.41
FANCA-220ENST00000566409 PTCHD4Q6ZW05 846 aa12.5□□□□□ -0.41
FANCA-220ENST00000566409 CXXC5Q7LFL8 322 aaKnown RBP12.5□□□□□ -0.41
FANCA-220ENST00000566409 ZER1Q7Z7L7 766 aa12.5□□□□□ -0.41
FANCA-220ENST00000566409 HPS1Q92902 700 aa12.5□□□□□ -0.41
FANCA-220ENST00000566409 RSRC1Q96IZ7 334 aaKnown RBP12.5□□□□□ -0.41
FANCA-220ENST00000566409 ZNF570Q96NI8 536 aa12.5□□□□□ -0.41
FANCA-220ENST00000566409 LRRC37BQ96QE4 947 aa12.5□□□□□ -0.41
FANCA-220ENST00000566409 GPX7Q96SL4 187 aaPredicted RBP12.5□□□□□ -0.41
FANCA-220ENST00000566409 SHARPINQ9H0F6 387 aa12.5□□□□□ -0.41
FANCA-220ENST00000566409 HINT3Q9NQE9 182 aaKnown RBP12.5□□□□□ -0.41
FANCA-220ENST00000566409 ZNF275Q9NSD4 429 aaPredicted RBP12.5□□□□□ -0.41
FANCA-220ENST00000566409 TAGLN3Q9UI15 199 aa12.5□□□□□ -0.41
FANCA-220ENST00000566409 KCNS2Q9ULS6 477 aa12.5□□□□□ -0.41
FANCA-220ENST00000566409 ARL2BPQ9Y2Y0 163 aa12.5□□□□□ -0.41
FANCA-220ENST00000566409 WNK2Q9Y3S1 2297 aa12.49□□□□□ -0.41
FANCA-220ENST00000566409 UNC119BA6NIH7 251 aa12.49□□□□□ -0.41
FANCA-220ENST00000566409 ARPC2O15144 300 aa12.49□□□□□ -0.41
FANCA-220ENST00000566409 AHCYL1O43865 530 aa12.49□□□□□ -0.41
FANCA-220ENST00000566409 MPZL1O95297 269 aa12.49□□□□□ -0.41
FANCA-220ENST00000566409 ACHEP22303 614 aa12.49□□□□□ -0.41
FANCA-220ENST00000566409 SDHAP31040 664 aa12.49□□□□□ -0.41
FANCA-220ENST00000566409 CDKN2AP42771 156 aaKnown RBP12.49□□□□□ -0.41
FANCA-220ENST00000566409 GDI2P50395 445 aaKnown RBP12.49□□□□□ -0.41
FANCA-220ENST00000566409 MMP15P51511 669 aa12.49□□□□□ -0.41
FANCA-220ENST00000566409 SELENOVP59797 346 aa12.49□□□□□ -0.41
FANCA-220ENST00000566409 PCBD1P61457 104 aa12.49□□□□□ -0.41
FANCA-220ENST00000566409 MRPS11P82912 194 aaKnown RBP12.49□□□□□ -0.41
FANCA-220ENST00000566409 DBPQ10586 325 aaPredicted RBP12.49□□□□□ -0.41
FANCA-220ENST00000566409 KRR1Q13601 381 aaKnown RBP12.49□□□□□ -0.41
FANCA-220ENST00000566409 CCNIQ14094 377 aa12.49□□□□□ -0.41
FANCA-220ENST00000566409 SYT9Q86SS6 491 aa12.49□□□□□ -0.41
FANCA-220ENST00000566409 SLC25A40Q8TBP6 338 aa12.49□□□□□ -0.41
FANCA-220ENST00000566409 KLF14Q8TD94 323 aaPredicted RBP12.49□□□□□ -0.41
FANCA-220ENST00000566409 IPCEF1Q8WWN9 437 aaPredicted RBP12.49□□□□□ -0.41
FANCA-220ENST00000566409 OR2J1Q9GZK6 312 aa12.49□□□□□ -0.41
FANCA-220ENST00000566409 SYT4Q9H2B2 425 aa12.49□□□□□ -0.41
FANCA-220ENST00000566409 SLCO1C1Q9NYB5 712 aa12.49□□□□□ -0.41
FANCA-220ENST00000566409 NKIRAS2Q9NYR9 191 aa12.49□□□□□ -0.41
FANCA-220ENST00000566409 VSX1Q9NZR4 365 aaPredicted RBP12.49□□□□□ -0.41
FANCA-220ENST00000566409 IER3IP1Q9Y5U9 82 aa12.49□□□□□ -0.41
FANCA-220ENST00000566409 C12orf71A8MTZ7 269 aa12.48□□□□□ -0.41
FANCA-220ENST00000566409 DCTN6O00399 190 aa12.48□□□□□ -0.41
FANCA-220ENST00000566409 SOCS2O14508 198 aa12.48□□□□□ -0.41
FANCA-220ENST00000566409 XKRYO14609 159 aa12.48□□□□□ -0.41
FANCA-220ENST00000566409 SLC16A7O60669 478 aa12.48□□□□□ -0.41
FANCA-220ENST00000566409 CDC14BO60729 498 aa12.48□□□□□ -0.41
FANCA-220ENST00000566409 GMNNO75496 209 aa12.48□□□□□ -0.41
FANCA-220ENST00000566409 TXNDC12O95881 172 aa12.48□□□□□ -0.41
FANCA-220ENST00000566409 GUCA1AP43080 201 aaPredicted RBP12.48□□□□□ -0.41
FANCA-220ENST00000566409 GPR6P46095 362 aaPredicted RBP12.48□□□□□ -0.41
FANCA-220ENST00000566409 CDH15P55291 814 aa12.48□□□□□ -0.41
FANCA-220ENST00000566409 TMEM33P57088 247 aa12.48□□□□□ -0.41
FANCA-220ENST00000566409 SAMD4BQ5PRF9 694 aaKnown RBP12.48□□□□□ -0.41
FANCA-220ENST00000566409 MBNL2Q5VZF2 373 aaKnown RBP12.48□□□□□ -0.41
FANCA-220ENST00000566409 GPR139Q6DWJ6 353 aa12.48□□□□□ -0.41
FANCA-220ENST00000566409 DPY19L2P2Q6ZN68 376 aa12.48□□□□□ -0.41
FANCA-220ENST00000566409 ALDH16A1Q8IZ83 802 aa12.48□□□□□ -0.41
FANCA-220ENST00000566409 DEFB107AQ8IZN7 70 aa12.48□□□□□ -0.41
FANCA-220ENST00000566409 LINC01356Q8N9X3 169 aa12.48□□□□□ -0.41
FANCA-220ENST00000566409 CLDND2Q8NHS1 167 aa12.48□□□□□ -0.41
FANCA-220ENST00000566409 ABHD4Q8TB40 342 aa12.48□□□□□ -0.41
FANCA-220ENST00000566409 C4orf45Q96LM5 186 aa12.48□□□□□ -0.41
FANCA-220ENST00000566409 NUAK2Q9H093 628 aa12.48□□□□□ -0.41
FANCA-220ENST00000566409 POFUT1Q9H488 388 aa12.48□□□□□ -0.41
FANCA-220ENST00000566409 NARFLQ9H6Q4 476 aa12.48□□□□□ -0.41
FANCA-220ENST00000566409 LPAR3Q9UBY5 353 aa12.48□□□□□ -0.41
FANCA-220ENST00000566409 MAGEL2Q9UJ55 1249 aa12.48□□□□□ -0.41
FANCA-220ENST00000566409 KLHL21Q9UJP4 597 aa12.48□□□□□ -0.41
FANCA-220ENST00000566409 COA3Q9Y2R0 106 aaPredicted RBP12.48□□□□□ -0.41
FANCA-220ENST00000566409 CACNG2Q9Y698 323 aa12.48□□□□□ -0.41
FANCA-220ENST00000566409 FBN3Q75N90 2809 aa12.47□□□□□ -0.41
FANCA-220ENST00000566409 ARHGAP32A7KAX9 2087 aa12.47□□□□□ -0.41
FANCA-220ENST00000566409 TANC2Q9HCD6 1990 aa12.47□□□□□ -0.41
FANCA-220ENST00000566409 GADD45GO95257 159 aa12.47□□□□□ -0.41
FANCA-220ENST00000566409 GPANK1O95872 356 aa12.47□□□□□ -0.41
FANCA-220ENST00000566409 IFNA2P01563 188 aa12.47□□□□□ -0.41
FANCA-220ENST00000566409 CRYBB2P43320 205 aa12.47□□□□□ -0.41
FANCA-220ENST00000566409 LMO4P61968 165 aa12.47□□□□□ -0.41
FANCA-220ENST00000566409 PPP1CBP62140 327 aa12.47□□□□□ -0.41
FANCA-220ENST00000566409 TSTQ16762 297 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms