RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 ENDOGQ14249 297 aaKnown RBP15.77■□□□□ 0.12
SYNGR3-204ENST00000564642 UNQ6126/PRO20091Q6UXV3 157 aa15.77■□□□□ 0.12
SYNGR3-204ENST00000564642 SYNPRQ8TBG9 265 aa15.77■□□□□ 0.12
SYNGR3-204ENST00000564642 CCDC124Q96CT7 223 aaKnown RBP15.77■□□□□ 0.12
SYNGR3-204ENST00000564642 CLPTM1LQ96KA5 538 aa15.77■□□□□ 0.12
SYNGR3-204ENST00000564642 POM121L2Q96KW2 1035 aa15.77■□□□□ 0.12
SYNGR3-204ENST00000564642 FOXN4Q96NZ1 517 aa15.77■□□□□ 0.12
SYNGR3-204ENST00000564642 IFT27Q9BW83 186 aa15.77■□□□□ 0.12
SYNGR3-204ENST00000564642 WNT5BQ9H1J7 359 aa15.77■□□□□ 0.12
SYNGR3-204ENST00000564642 TPK1Q9H3S4 243 aa15.77■□□□□ 0.12
SYNGR3-204ENST00000564642 VSX1Q9NZR4 365 aaPredicted RBP15.77■□□□□ 0.12
SYNGR3-204ENST00000564642 LYVE1Q9Y5Y7 322 aa15.77■□□□□ 0.12
SYNGR3-204ENST00000564642 IMPA2O14732 288 aa15.76■□□□□ 0.11
SYNGR3-204ENST00000564642 SCG5P05408 212 aa15.76■□□□□ 0.11
SYNGR3-204ENST00000564642 DAOP14920 347 aa15.76■□□□□ 0.11
SYNGR3-204ENST00000564642 CTLA4P16410 223 aa15.76■□□□□ 0.11
SYNGR3-204ENST00000564642 NOS3P29474 1203 aa15.76■□□□□ 0.11
SYNGR3-204ENST00000564642 CDKN2AP42771 156 aaKnown RBP15.76■□□□□ 0.11
SYNGR3-204ENST00000564642 ALDH3B1P43353 468 aa15.76■□□□□ 0.11
SYNGR3-204ENST00000564642 MAGEA2P43356 314 aa15.76■□□□□ 0.11
SYNGR3-204ENST00000564642 GSSP48637 474 aa15.76■□□□□ 0.11
SYNGR3-204ENST00000564642 LOXL1Q08397 574 aaPredicted RBP15.76■□□□□ 0.11
SYNGR3-204ENST00000564642 PGBD2Q6P3X8 592 aa15.76■□□□□ 0.11
SYNGR3-204ENST00000564642 PTCHD4Q6ZW05 846 aa15.76■□□□□ 0.11
SYNGR3-204ENST00000564642 JAZF1Q86VZ6 243 aa15.76■□□□□ 0.11
SYNGR3-204ENST00000564642 GLB1L2Q8IW92 636 aa15.76■□□□□ 0.11
SYNGR3-204ENST00000564642 OR1J1Q8NGS3 322 aa15.76■□□□□ 0.11
SYNGR3-204ENST00000564642 SAMD8Q96LT4 415 aa15.76■□□□□ 0.11
SYNGR3-204ENST00000564642 TRIM15Q9C019 465 aa15.76■□□□□ 0.11
SYNGR3-204ENST00000564642 NUAK2Q9H093 628 aa15.76■□□□□ 0.11
SYNGR3-204ENST00000564642 EMC7Q9NPA0 242 aa15.76■□□□□ 0.11
SYNGR3-204ENST00000564642 COA3Q9Y2R0 106 aaPredicted RBP15.76■□□□□ 0.11
SYNGR3-204ENST00000564642 LOC100509620A0A075B734 347 aa15.75■□□□□ 0.11
SYNGR3-204ENST00000564642 ARPC3O15145 178 aa15.75■□□□□ 0.11
SYNGR3-204ENST00000564642 GYG2O15488 501 aa15.75■□□□□ 0.11
SYNGR3-204ENST00000564642 UBOX5O94941 541 aa15.75■□□□□ 0.11
SYNGR3-204ENST00000564642 CCNB2O95067 398 aa15.75■□□□□ 0.11
SYNGR3-204ENST00000564642 RENP00797 406 aa15.75■□□□□ 0.11
SYNGR3-204ENST00000564642 USF1P22415 310 aaPredicted RBP15.75■□□□□ 0.11
SYNGR3-204ENST00000564642 CRABP1P29762 137 aa15.75■□□□□ 0.11
SYNGR3-204ENST00000564642 CENPAP49450 140 aa15.75■□□□□ 0.11
SYNGR3-204ENST00000564642 KLF3P57682 345 aaPredicted RBP15.75■□□□□ 0.11
SYNGR3-204ENST00000564642 ERVS71-1P61550 626 aa15.75■□□□□ 0.11
SYNGR3-204ENST00000564642 SCRN3Q0VDG4 424 aa15.75■□□□□ 0.11
SYNGR3-204ENST00000564642 TRAP1Q12931 704 aaKnown RBP15.75■□□□□ 0.11
SYNGR3-204ENST00000564642 MAD2L1BPQ15013 274 aaPredicted RBP15.75■□□□□ 0.11
SYNGR3-204ENST00000564642 NKPD1Q17RQ9 610 aa15.75■□□□□ 0.11
SYNGR3-204ENST00000564642 ZNF774Q6NX45 483 aa15.75■□□□□ 0.11
SYNGR3-204ENST00000564642 DNM1P34Q6PK57 102 aa15.75■□□□□ 0.11
SYNGR3-204ENST00000564642 UGT2A3Q6UWM9 527 aa15.75■□□□□ 0.11
SYNGR3-204ENST00000564642 ZNF540Q8NDQ6 660 aa15.75■□□□□ 0.11
SYNGR3-204ENST00000564642 UBASH3BQ8TF42 649 aa15.75■□□□□ 0.11
SYNGR3-204ENST00000564642 SLCO1C1Q9NYB5 712 aa15.75■□□□□ 0.11
SYNGR3-204ENST00000564642 TAAR3PQ9P1P4 343 aa15.75■□□□□ 0.11
SYNGR3-204ENST00000564642 MYEF2Q9P2K5 600 aaKnown RBP15.75■□□□□ 0.11
SYNGR3-204ENST00000564642 YLPM1P49750 1951 aaKnown RBP15.75■□□□□ 0.11
SYNGR3-204ENST00000564642 A0A096LNT2 108 aa15.74■□□□□ 0.11
SYNGR3-204ENST00000564642 INAFM1C9JVW0 142 aa15.74■□□□□ 0.11
SYNGR3-204ENST00000564642 IDH3BO43837 385 aa15.74■□□□□ 0.11
SYNGR3-204ENST00000564642 CD5LO43866 347 aa15.74■□□□□ 0.11
SYNGR3-204ENST00000564642 CLPTM1O96005 669 aa15.74■□□□□ 0.11
SYNGR3-204ENST00000564642 IGFBP1P08833 259 aaPredicted RBP15.74■□□□□ 0.11
SYNGR3-204ENST00000564642 RAP2AP10114 183 aa15.74■□□□□ 0.11
SYNGR3-204ENST00000564642 ZNF250P15622 560 aa15.74■□□□□ 0.11
SYNGR3-204ENST00000564642 NR4A2P43354 598 aa15.74■□□□□ 0.11
SYNGR3-204ENST00000564642 KRTAP1-1Q07627 177 aa15.74■□□□□ 0.11
SYNGR3-204ENST00000564642 GGTLC2Q14390 218 aa15.74■□□□□ 0.11
SYNGR3-204ENST00000564642 MOGQ16653 247 aa15.74■□□□□ 0.11
SYNGR3-204ENST00000564642 ALKBH6Q3KRA9 238 aa15.74■□□□□ 0.11
SYNGR3-204ENST00000564642 DNAL1Q4LDG9 190 aa15.74■□□□□ 0.11
SYNGR3-204ENST00000564642 OR2T5Q6IEZ7 315 aa15.74■□□□□ 0.11
SYNGR3-204ENST00000564642 RPL13AP3Q6NVV1 102 aa15.74■□□□□ 0.11
SYNGR3-204ENST00000564642 LEG1Q6P5S2 330 aa15.74■□□□□ 0.11
SYNGR3-204ENST00000564642 ARL9Q6T311 187 aa15.74■□□□□ 0.11
SYNGR3-204ENST00000564642 ZNF620Q6ZNG0 422 aa15.74■□□□□ 0.11
SYNGR3-204ENST00000564642 C1orf174Q8IYL3 243 aa15.74■□□□□ 0.11
SYNGR3-204ENST00000564642 OR9Q2Q8NGE9 314 aa15.74■□□□□ 0.11
SYNGR3-204ENST00000564642 OR52L1Q8NGH7 329 aa15.74■□□□□ 0.11
SYNGR3-204ENST00000564642 OR2T29Q8NH02 315 aa15.74■□□□□ 0.11
SYNGR3-204ENST00000564642 REEP1Q9H902 201 aa15.74■□□□□ 0.11
SYNGR3-204ENST00000564642 SRA1Q9HD15 236 aaKnown RBP15.74■□□□□ 0.11
SYNGR3-204ENST00000564642 NDRG4Q9ULP0 352 aaKnown RBP15.74■□□□□ 0.11
SYNGR3-204ENST00000564642 U3KQV3 271 aa15.74■□□□□ 0.11
SYNGR3-204ENST00000564642 VWC2LB2RUY7 222 aa15.73■□□□□ 0.11
SYNGR3-204ENST00000564642 ACOT8O14734 319 aa15.73■□□□□ 0.11
SYNGR3-204ENST00000564642 SGCEO43556 437 aa15.73■□□□□ 0.11
SYNGR3-204ENST00000564642 TLX2O43763 284 aaPredicted RBP15.73■□□□□ 0.11
SYNGR3-204ENST00000564642 DOK2O60496 412 aa15.73■□□□□ 0.11
SYNGR3-204ENST00000564642 MPZL1O95297 269 aa15.73■□□□□ 0.11
SYNGR3-204ENST00000564642 GASTP01350 101 aa15.73■□□□□ 0.11
SYNGR3-204ENST00000564642 COX5BP10606 129 aa15.73■□□□□ 0.11
SYNGR3-204ENST00000564642 NAT2P11245 290 aa15.73■□□□□ 0.11
SYNGR3-204ENST00000564642 HIST1H1CP16403 213 aaKnown RBP15.73■□□□□ 0.11
SYNGR3-204ENST00000564642 GCH1P30793 250 aa15.73■□□□□ 0.11
SYNGR3-204ENST00000564642 ARHGDIAP52565 204 aa15.73■□□□□ 0.11
SYNGR3-204ENST00000564642 LSM6P62312 80 aaKnown RBP15.73■□□□□ 0.11
SYNGR3-204ENST00000564642 PPP1R8Q12972 351 aaKnown RBP15.73■□□□□ 0.11
SYNGR3-204ENST00000564642 AQP6Q13520 282 aa15.73■□□□□ 0.11
SYNGR3-204ENST00000564642 TMEM249Q2WGJ8 235 aa15.73■□□□□ 0.11
SYNGR3-204ENST00000564642 ZNF718Q3SXZ3 478 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms