RNA–Protein interactions for RNA: ENST00000564399.1

VPS4A-203, Transcript of vacuolar protein sorting 4 homolog A, humanhuman

TSL 5

Gene VPS4A, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4A-203ENST00000564399 GSTM3P21266 225 aa6.1□□□□□ -1.43
VPS4A-203ENST00000564399 CDAP32320 146 aa6.1□□□□□ -1.43
VPS4A-203ENST00000564399 MMP16P51512 607 aa6.1□□□□□ -1.43
VPS4A-203ENST00000564399 CDH12P55289 794 aa6.1□□□□□ -1.43
VPS4A-203ENST00000564399 ABCE1P61221 599 aaKnown RBP6.1□□□□□ -1.43
VPS4A-203ENST00000564399 ERVK-25P63136 954 aa6.1□□□□□ -1.43
VPS4A-203ENST00000564399 MRPS34P82930 218 aaKnown RBP6.1□□□□□ -1.43
VPS4A-203ENST00000564399 PSG4Q00888 419 aa6.1□□□□□ -1.43
VPS4A-203ENST00000564399 C6orf10Q5SRN2 563 aa6.1□□□□□ -1.43
VPS4A-203ENST00000564399 DHRS7BQ6IAN0 325 aaPredicted RBP6.1□□□□□ -1.43
VPS4A-203ENST00000564399 ARL9Q6T311 187 aa6.1□□□□□ -1.43
VPS4A-203ENST00000564399 GDPGP1Q6ZNW5 385 aa6.1□□□□□ -1.43
VPS4A-203ENST00000564399 Q6ZTK2 550 aa6.1□□□□□ -1.43
VPS4A-203ENST00000564399 RANBP3LQ86VV4 465 aaPredicted RBP6.1□□□□□ -1.43
VPS4A-203ENST00000564399 KRT73Q86Y46 540 aa6.1□□□□□ -1.43
VPS4A-203ENST00000564399 PTOV1Q86YD1 416 aa6.1□□□□□ -1.43
VPS4A-203ENST00000564399 FITM2Q8N6M3 262 aa6.1□□□□□ -1.43
VPS4A-203ENST00000564399 ATG16L2Q8NAA4 619 aa6.1□□□□□ -1.43
VPS4A-203ENST00000564399 ZSCAN4Q8NAM6 433 aaPredicted RBP6.1□□□□□ -1.43
VPS4A-203ENST00000564399 SCCPDHQ8NBX0 429 aa6.1□□□□□ -1.43
VPS4A-203ENST00000564399 VANGL1Q8TAA9 524 aaPredicted RBP6.1□□□□□ -1.43
VPS4A-203ENST00000564399 ZNF420Q8TAQ5 688 aaPredicted RBP6.1□□□□□ -1.43
VPS4A-203ENST00000564399 PPP1R14AQ96A00 147 aa6.1□□□□□ -1.43
VPS4A-203ENST00000564399 RNF166Q96A37 237 aaPredicted RBP6.1□□□□□ -1.43
VPS4A-203ENST00000564399 DACT3Q96B18 629 aaPredicted RBP6.1□□□□□ -1.43
VPS4A-203ENST00000564399 PKNOX2Q96KN3 472 aa6.1□□□□□ -1.43
VPS4A-203ENST00000564399 C4orf45Q96LM5 186 aa6.1□□□□□ -1.43
VPS4A-203ENST00000564399 MAGEB18Q96M61 343 aa6.1□□□□□ -1.43
VPS4A-203ENST00000564399 C16orf45Q96MC5 204 aaPredicted RBP6.1□□□□□ -1.43
VPS4A-203ENST00000564399 OR2V2Q96R30 315 aa6.1□□□□□ -1.43
VPS4A-203ENST00000564399 TMEM246Q9BRR3 403 aa6.1□□□□□ -1.43
VPS4A-203ENST00000564399 SPATA5L1Q9BVQ7 753 aa6.1□□□□□ -1.43
VPS4A-203ENST00000564399 TRIM15Q9C019 465 aa6.1□□□□□ -1.43
VPS4A-203ENST00000564399 RMND5AQ9H871 391 aa6.1□□□□□ -1.43
VPS4A-203ENST00000564399 NANSQ9NR45 359 aa6.1□□□□□ -1.43
VPS4A-203ENST00000564399 MAN2C1Q9NTJ4 1040 aa6.1□□□□□ -1.43
VPS4A-203ENST00000564399 ACOXLQ9NUZ1 547 aa6.1□□□□□ -1.43
VPS4A-203ENST00000564399 AIG1Q9NVV5 245 aa6.1□□□□□ -1.43
VPS4A-203ENST00000564399 TAS2R5Q9NYW4 299 aa6.1□□□□□ -1.43
VPS4A-203ENST00000564399 RAP2CQ9Y3L5 183 aa6.1□□□□□ -1.43
VPS4A-203ENST00000564399 CENPVL3A0A0U1RRI6 287 aa6.09□□□□□ -1.43
VPS4A-203ENST00000564399 ZNF816-ZNF321PA0A0X1KG74 233 aa6.09□□□□□ -1.43
VPS4A-203ENST00000564399 A0A1W2PRG6 482 aa6.09□□□□□ -1.43
VPS4A-203ENST00000564399 BLOC1S5-TXNDC5H3BN57 136 aa6.09□□□□□ -1.43
VPS4A-203ENST00000564399 P2RY10O00398 339 aa6.09□□□□□ -1.43
VPS4A-203ENST00000564399 KPNA4O00629 521 aaPredicted RBP6.09□□□□□ -1.43
VPS4A-203ENST00000564399 ENSAO43768 121 aaKnown RBP6.09□□□□□ -1.43
VPS4A-203ENST00000564399 TOX4O94842 621 aa6.09□□□□□ -1.43
VPS4A-203ENST00000564399 SLC2A10O95528 541 aa6.09□□□□□ -1.43
VPS4A-203ENST00000564399 ABHD16AO95870 558 aa6.09□□□□□ -1.43
VPS4A-203ENST00000564399 SERPINE1P05121 402 aa6.09□□□□□ -1.43
VPS4A-203ENST00000564399 SFTPBP07988 381 aa6.09□□□□□ -1.43
VPS4A-203ENST00000564399 ZCCHC18P0CG32 403 aa6.09□□□□□ -1.43
VPS4A-203ENST00000564399 CFHR2P36980 270 aa6.09□□□□□ -1.43
VPS4A-203ENST00000564399 IER3P46695 156 aa6.09□□□□□ -1.43
VPS4A-203ENST00000564399 EGR3Q06889 387 aa6.09□□□□□ -1.43
VPS4A-203ENST00000564399 RGNQ15493 299 aa6.09□□□□□ -1.43
VPS4A-203ENST00000564399 ZNF74Q16587 644 aa6.09□□□□□ -1.43
VPS4A-203ENST00000564399 HIST3H3Q16695 136 aa6.09□□□□□ -1.43
VPS4A-203ENST00000564399 SWT1Q5T5J6 900 aaKnown RBP6.09□□□□□ -1.43
VPS4A-203ENST00000564399 HHATQ5VTY9 493 aa6.09□□□□□ -1.43
VPS4A-203ENST00000564399 WDR25Q64LD2 544 aaPredicted RBP6.09□□□□□ -1.43
VPS4A-203ENST00000564399 OGFOD2Q6N063 350 aa6.09□□□□□ -1.43
VPS4A-203ENST00000564399 DHRS4L2Q6PKH6 230 aa6.09□□□□□ -1.43
VPS4A-203ENST00000564399 Q6ZR03 302 aa6.09□□□□□ -1.43
VPS4A-203ENST00000564399 NANOGNBQ7Z5D8 188 aa6.09□□□□□ -1.43
VPS4A-203ENST00000564399 COMTD1Q86VU5 262 aa6.09□□□□□ -1.43
VPS4A-203ENST00000564399 NOXO1Q8NFA2 376 aa6.09□□□□□ -1.43
VPS4A-203ENST00000564399 NFKBIDQ8NI38 313 aa6.09□□□□□ -1.43
VPS4A-203ENST00000564399 LRTOMTQ8WZ04 291 aa6.09□□□□□ -1.43
VPS4A-203ENST00000564399 NSMAFQ92636 917 aa6.09□□□□□ -1.43
VPS4A-203ENST00000564399 VPS33AQ96AX1 596 aa6.09□□□□□ -1.43
VPS4A-203ENST00000564399 CMBLQ96DG6 245 aa6.09□□□□□ -1.43
VPS4A-203ENST00000564399 ITCHQ96J02 903 aa6.09□□□□□ -1.43
VPS4A-203ENST00000564399 MCHR1Q99705 422 aa6.09□□□□□ -1.43
VPS4A-203ENST00000564399 CDADC1Q9BWV3 514 aa6.09□□□□□ -1.43
VPS4A-203ENST00000564399 OR2H1Q9GZK4 316 aa6.09□□□□□ -1.43
VPS4A-203ENST00000564399 WNT5BQ9H1J7 359 aa6.09□□□□□ -1.43
VPS4A-203ENST00000564399 DPAGT1Q9H3H5 408 aa6.09□□□□□ -1.43
VPS4A-203ENST00000564399 RAD21L1Q9H4I0 556 aa6.09□□□□□ -1.43
VPS4A-203ENST00000564399 MEAF6Q9HAF1 191 aa6.09□□□□□ -1.43
VPS4A-203ENST00000564399 GCM1Q9NP62 436 aa6.09□□□□□ -1.43
VPS4A-203ENST00000564399 IGHV1-69DA0A0B4J2H0 117 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 IGHV3-64DA0A0J9YX35 117 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 BTBD17A6NE02 478 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 PRORSD1PA6NEY8 169 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 LRRC30A6NM36 301 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 ZNF879B4DU55 563 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 C22orf46C9J442 243 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 CLIC1O00299 241 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 PHYHO14832 338 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 TPST2O60704 377 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 FMO6PO60774 539 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 TRMUO75648 421 aaKnown RBP6.08□□□□□ -1.44
VPS4A-203ENST00000564399 SLC22A3O75751 556 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 IGHV1-69P01742 117 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 F13BP05160 661 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 ACADSP16219 412 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 KITLGP21583 273 aa6.08□□□□□ -1.44
VPS4A-203ENST00000564399 FUT4P22083 530 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms