RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 LRRTM1Q86UE6 522 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 SLC25A42Q86VD7 318 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 VRK2Q86Y07 508 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 DCUN1D3Q8IWE4 304 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 ZNF595Q8IYB9 648 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 TBC1D3Q8IZP1 549 aaPredicted RBP5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 MMP21Q8N119 569 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 GABRG1Q8N1C3 465 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 OR4K14Q8NGD5 310 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 OR4A4PQ8NGN8 299 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 IFI44Q8TCB0 444 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 ADAMTS17Q8TE56 1095 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 C2CD4CQ8TF44 421 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 DUSP19Q8WTR2 217 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 MITD1Q8WV92 249 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 CDS1Q92903 461 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 SLC25A28Q96A46 364 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 ZNF75AQ96N20 296 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 C1orf43Q9BWL3 253 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 DPH1Q9BZG8 443 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 NMES1Q9C002 83 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 WDR13Q9H1Z4 485 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 XKR8Q9H6D3 395 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 MTHFD2LQ9H903 347 aaPredicted RBP5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 MED20Q9H944 212 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 LHX9Q9NQ69 397 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 CUTCQ9NTM9 273 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 SPG21Q9NZD8 308 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 DNAJB11Q9UBS4 358 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 GHRLQ9UBU3 117 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 LPAR3Q9UBY5 353 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 SHPKQ9UHJ6 478 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 MBD1Q9UIS9 605 aaPredicted RBP5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 SLC25A13Q9UJS0 675 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 SLC7A7Q9UM01 511 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 SH2B3Q9UQQ2 575 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 MED31Q9Y3C7 131 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 SLC22A7Q9Y694 548 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 NINQ8N4C6 2090 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 LOC390937A0A1W2PQ73 354 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 TMEM202A6NGA9 273 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 OR2AG2A6NM03 316 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 GRM6O15303 877 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 SIGLEC5O15389 551 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 PPIHO43447 177 aaKnown RBP5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 TMPRSS11DO60235 418 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 FADS1O60427 444 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 ICOSLGO75144 302 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 DUSP11O75319 330 aaKnown RBP5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 CLN5O75503 358 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 CTAG2O75638 210 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 PPP1R3DO95685 299 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 RAB3DO95716 219 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 F10P00742 488 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 IFNA17P01571 189 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 DBIP07108 87 aaKnown RBP5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 MRPL3P09001 348 aaKnown RBP5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 HOXB5P09067 269 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 OR8U8P0C7N1 319 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 IRF1P10914 325 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 ZNF44P15621 663 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 ZNF14P17017 642 aaPredicted RBP5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 TBPP20226 339 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 MAKP20794 623 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 ZBTB25P24278 435 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 HOXA6P31267 233 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 DIO1P49895 249 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 RBP2P50120 134 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 P2RY4P51582 365 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 DVL1P1P54792 670 aaPredicted RBP5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 SPCS3P61009 180 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 SIGLEC14Q08ET2 396 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 LMAN2Q12907 356 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 PON3Q15166 354 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 RHEBQ15382 184 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 KLHL26Q53HC5 615 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 ATPAF1Q5TC12 328 aaPredicted RBP5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 PRAMEF17Q5VTA0 474 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 FAM46CQ5VWP2 391 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 TMEM200BQ69YZ2 307 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 OR10K2Q6IF99 312 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 SLC8B1Q6J4K2 584 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 MTFR2Q6P444 385 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 TMEM220Q6QAJ8 160 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 RBMS3Q6XE24 437 aaKnown RBP5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 ZNF836Q6ZNA1 936 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 FRRS1Q6ZNA5 592 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 RFLNAQ6ZTI6 216 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 SLC24A5Q71RS6 500 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 SSX6Q7RTT6 188 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 FAM220AQ7Z4H9 259 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 ZNF280BQ86YH2 543 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 RNF152Q8N8N0 203 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 C7orf57Q8NEG2 295 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 OR4K17Q8NGC6 315 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 OR51S1Q8NGJ8 323 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 WFDC5Q8TCV5 224 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 PPP1R1CQ8WVI7 109 aa5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 GCDHQ92947 438 aaPredicted RBP5.37□□□□□ -1.55
SNRPA1-209ENST00000560307 PTX4Q96A99 478 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms