RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 EGFL6Q8IUX8 553 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 UBE2J2Q8N2K1 259 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 THEM6Q8WUY1 208 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 SNX33Q8WV41 574 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 ASB17Q8WXJ9 295 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 C4orf36Q96KX1 117 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 AMELYQ99218 206 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 FOXB1Q99853 325 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 TTYH2Q9BSA4 534 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 TTTY10Q9BZA0 68 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 SIAEQ9HAT2 523 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 LHFPL6Q9Y693 200 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 TNFSF13O75888 250 aa10.72□□□□□ -0.69
HERC1-205ENST00000559886 IL2RAP01589 272 aa10.72□□□□□ -0.69
HERC1-205ENST00000559886 MT-ND5P03915 603 aa10.72□□□□□ -0.69
HERC1-205ENST00000559886 HSMCR30P0CW71 290 aa10.72□□□□□ -0.69
HERC1-205ENST00000559886 CEACAM8P31997 349 aaPredicted RBP10.72□□□□□ -0.69
HERC1-205ENST00000559886 ACSM1Q08AH1 577 aa10.72□□□□□ -0.69
HERC1-205ENST00000559886 MLLT11Q13015 90 aaPredicted RBP10.72□□□□□ -0.69
HERC1-205ENST00000559886 EIF2B1Q14232 305 aaKnown RBP10.72□□□□□ -0.69
HERC1-205ENST00000559886 NRN1LQ496H8 165 aa10.72□□□□□ -0.69
HERC1-205ENST00000559886 ARMCX4Q5H9R4 360 aa10.72□□□□□ -0.69
HERC1-205ENST00000559886 LINC00346Q8IVM7 164 aa10.72□□□□□ -0.69
HERC1-205ENST00000559886 CNEP1R1Q8N9A8 125 aa10.72□□□□□ -0.69
HERC1-205ENST00000559886 ST6GALNAC3Q8NDV1 305 aa10.72□□□□□ -0.69
HERC1-205ENST00000559886 ST7LQ8TDW4 575 aa10.72□□□□□ -0.69
HERC1-205ENST00000559886 ABHD6Q9BV23 337 aa10.72□□□□□ -0.69
HERC1-205ENST00000559886 ZNF416Q9BWM5 594 aa10.72□□□□□ -0.69
HERC1-205ENST00000559886 ISYNA1Q9NPH2 558 aa10.72□□□□□ -0.69
HERC1-205ENST00000559886 TINAGQ9UJW2 476 aa10.72□□□□□ -0.69
HERC1-205ENST00000559886 POLEQ07864 2286 aa10.72□□□□□ -0.69
HERC1-205ENST00000559886 J3QLW9 94 aa10.72□□□□□ -0.69
HERC1-205ENST00000559886 MAGEB4O15481 346 aaPredicted RBP10.72□□□□□ -0.69
HERC1-205ENST00000559886 LALBAP00709 142 aa10.72□□□□□ -0.69
HERC1-205ENST00000559886 TMIGD3P0DMS9 266 aaPredicted RBP10.72□□□□□ -0.69
HERC1-205ENST00000559886 GLI4P10075 376 aa10.72□□□□□ -0.69
HERC1-205ENST00000559886 ZNF19P17023 458 aa10.72□□□□□ -0.69
HERC1-205ENST00000559886 CAPZA2P47755 286 aa10.72□□□□□ -0.69
HERC1-205ENST00000559886 FAPQ12884 760 aa10.72□□□□□ -0.69
HERC1-205ENST00000559886 ENDOGQ14249 297 aaKnown RBP10.72□□□□□ -0.69
HERC1-205ENST00000559886 TP53I3Q53FA7 332 aa10.72□□□□□ -0.69
HERC1-205ENST00000559886 VWA1Q6PCB0 445 aa10.72□□□□□ -0.69
HERC1-205ENST00000559886 CORO6Q6QEF8 472 aa10.72□□□□□ -0.69
HERC1-205ENST00000559886 PLEKHG7Q6ZR37 379 aa10.72□□□□□ -0.69
HERC1-205ENST00000559886 ZNF627Q7L945 461 aa10.72□□□□□ -0.69
HERC1-205ENST00000559886 DCXRQ7Z4W1 244 aa10.72□□□□□ -0.69
HERC1-205ENST00000559886 ABHD12BQ7Z5M8 362 aaPredicted RBP10.72□□□□□ -0.69
HERC1-205ENST00000559886 KCTD20Q7Z5Y7 419 aa10.72□□□□□ -0.69
HERC1-205ENST00000559886 ATCAYQ86WG3 371 aa10.72□□□□□ -0.69
HERC1-205ENST00000559886 NAXEQ8NCW5 288 aa10.72□□□□□ -0.69
HERC1-205ENST00000559886 OPALINQ96PE5 141 aa10.72□□□□□ -0.69
HERC1-205ENST00000559886 PLSCR4Q9NRQ2 329 aa10.72□□□□□ -0.69
HERC1-205ENST00000559886 BABAM2Q9NXR7 383 aa10.72□□□□□ -0.69
HERC1-205ENST00000559886 SULT1C4O75897 302 aa10.71□□□□□ -0.69
HERC1-205ENST00000559886 CNOT4O95628 575 aaKnown RBP10.71□□□□□ -0.69
HERC1-205ENST00000559886 LIPAP38571 399 aa10.71□□□□□ -0.69
HERC1-205ENST00000559886 FOXG1P55316 489 aaPredicted RBP10.71□□□□□ -0.69
HERC1-205ENST00000559886 ROM1Q03395 351 aa10.71□□□□□ -0.69
HERC1-205ENST00000559886 NFATC3Q12968 1075 aa10.71□□□□□ -0.69
HERC1-205ENST00000559886 KCTD18Q6PI47 426 aaPredicted RBP10.71□□□□□ -0.69
HERC1-205ENST00000559886 VASH1Q7L8A9 365 aaPredicted RBP10.71□□□□□ -0.69
HERC1-205ENST00000559886 BTLAQ7Z6A9 289 aa10.71□□□□□ -0.69
HERC1-205ENST00000559886 KLBQ86Z14 1044 aa10.71□□□□□ -0.69
HERC1-205ENST00000559886 OR52N5Q8NH56 324 aa10.71□□□□□ -0.69
HERC1-205ENST00000559886 STARD4Q96DR4 205 aa10.71□□□□□ -0.69
HERC1-205ENST00000559886 PELI1Q96FA3 418 aa10.71□□□□□ -0.69
HERC1-205ENST00000559886 ASH2LQ9UBL3 628 aa10.71□□□□□ -0.69
HERC1-205ENST00000559886 MRM2Q9UI43 246 aaKnown RBP10.71□□□□□ -0.69
HERC1-205ENST00000559886 POLR1DQ9Y2S0 133 aa10.71□□□□□ -0.69
HERC1-205ENST00000559886 COL6A6A6NMZ7 2263 aa10.71□□□□□ -0.7
HERC1-205ENST00000559886 METTL15A6NJ78 407 aa10.7□□□□□ -0.7
HERC1-205ENST00000559886 PSMD9O00233 223 aa10.7□□□□□ -0.7
HERC1-205ENST00000559886 ABHD16AO95870 558 aa10.7□□□□□ -0.7
HERC1-205ENST00000559886 CGAP01215 116 aa10.7□□□□□ -0.7
HERC1-205ENST00000559886 B4GALT1P15291 398 aa10.7□□□□□ -0.7
HERC1-205ENST00000559886 MPGP29372 298 aa10.7□□□□□ -0.7
HERC1-205ENST00000559886 ARF1P84077 181 aaKnown RBP10.7□□□□□ -0.7
HERC1-205ENST00000559886 BDH1Q02338 343 aa10.7□□□□□ -0.7
HERC1-205ENST00000559886 LRRC18Q8N456 261 aa10.7□□□□□ -0.7
HERC1-205ENST00000559886 SLC22A24Q8N4F4 322 aa10.7□□□□□ -0.7
HERC1-205ENST00000559886 OR2AJ1Q8NGZ0 328 aa10.7□□□□□ -0.7
HERC1-205ENST00000559886 MAP6Q96JE9 813 aa10.7□□□□□ -0.7
HERC1-205ENST00000559886 OR8B4Q96RC9 309 aa10.7□□□□□ -0.7
HERC1-205ENST00000559886 C1orf198Q9H425 327 aa10.7□□□□□ -0.7
HERC1-205ENST00000559886 SLCO1C1Q9NYB5 712 aa10.7□□□□□ -0.7
HERC1-205ENST00000559886 NDUFA13Q9P0J0 144 aa10.7□□□□□ -0.7
HERC1-205ENST00000559886 GDF2Q9UK05 429 aaPredicted RBP10.7□□□□□ -0.7
HERC1-205ENST00000559886 GNG8Q9UK08 70 aa10.7□□□□□ -0.7
HERC1-205ENST00000559886 SMIM31A0A1B0GVY4 71 aa10.7□□□□□ -0.7
HERC1-205ENST00000559886 KRT8P05787 483 aa10.7□□□□□ -0.7
HERC1-205ENST00000559886 CST2P09228 141 aa10.7□□□□□ -0.7
HERC1-205ENST00000559886 TACSTD2P09758 323 aa10.7□□□□□ -0.7
HERC1-205ENST00000559886 OR8G3PP0DMU2 310 aa10.7□□□□□ -0.7
HERC1-205ENST00000559886 CPEP16870 476 aa10.7□□□□□ -0.7
HERC1-205ENST00000559886 RGS6P49758 472 aa10.7□□□□□ -0.7
HERC1-205ENST00000559886 AQP6Q13520 282 aa10.7□□□□□ -0.7
HERC1-205ENST00000559886 TPBGQ13641 420 aa10.7□□□□□ -0.7
HERC1-205ENST00000559886 ZNF813Q6ZN06 617 aa10.7□□□□□ -0.7
HERC1-205ENST00000559886 CFAP77Q6ZQR2 320 aa10.7□□□□□ -0.7
HERC1-205ENST00000559886 Q6ZT83 130 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms