RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 ATP6V1G2O95670 118 aa18.85■□□□□ 0.61
SNX1-206ENST00000559389 BLVRAP53004 296 aa18.85■□□□□ 0.61
SNX1-206ENST00000559389 PCBD1P61457 104 aa18.85■□□□□ 0.61
SNX1-206ENST00000559389 TEKQ02763 1124 aa18.85■□□□□ 0.61
SNX1-206ENST00000559389 SPOCK1Q08629 439 aa18.85■□□□□ 0.61
SNX1-206ENST00000559389 SYT9Q86SS6 491 aa18.85■□□□□ 0.61
SNX1-206ENST00000559389 ZNF584Q8IVC4 421 aa18.85■□□□□ 0.61
SNX1-206ENST00000559389 OR6K6Q8NGW6 343 aa18.85■□□□□ 0.61
SNX1-206ENST00000559389 NRG4Q8WWG1 115 aa18.85■□□□□ 0.61
SNX1-206ENST00000559389 OR51V1Q9H2C8 321 aa18.85■□□□□ 0.61
SNX1-206ENST00000559389 RNF121Q9H920 327 aa18.85■□□□□ 0.61
SNX1-206ENST00000559389 ASH2LQ9UBL3 628 aa18.85■□□□□ 0.61
SNX1-206ENST00000559389 MOKQ9UQ07 419 aa18.85■□□□□ 0.61
SNX1-206ENST00000559389 POLR1DQ9Y2S0 133 aa18.85■□□□□ 0.61
SNX1-206ENST00000559389 A0A1W2PPR1 153 aa18.84■□□□□ 0.61
SNX1-206ENST00000559389 GLCEO94923 617 aa18.84■□□□□ 0.61
SNX1-206ENST00000559389 HLA-DQA2P01906 255 aa18.84■□□□□ 0.61
SNX1-206ENST00000559389 PRF1P14222 555 aa18.84■□□□□ 0.61
SNX1-206ENST00000559389 CDC42P60953 191 aa18.84■□□□□ 0.61
SNX1-206ENST00000559389 SLC35D3Q5M8T2 416 aa18.84■□□□□ 0.61
SNX1-206ENST00000559389 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.84■□□□□ 0.61
SNX1-206ENST00000559389 OR10H5Q8NGA6 315 aa18.84■□□□□ 0.61
SNX1-206ENST00000559389 MS4A3Q96HJ5 214 aa18.84■□□□□ 0.61
SNX1-206ENST00000559389 IL4I1Q96RQ9 567 aa18.84■□□□□ 0.61
SNX1-206ENST00000559389 OR2H1Q9GZK4 316 aa18.84■□□□□ 0.61
SNX1-206ENST00000559389 VCXQ9H320 206 aa18.84■□□□□ 0.61
SNX1-206ENST00000559389 FAM118AQ9NWS6 357 aa18.84■□□□□ 0.61
SNX1-206ENST00000559389 KCNG2Q9UJ96 466 aa18.84■□□□□ 0.61
SNX1-206ENST00000559389 RNF115Q9Y4L5 304 aa18.84■□□□□ 0.61
SNX1-206ENST00000559389 LHFPL6Q9Y693 200 aa18.84■□□□□ 0.61
SNX1-206ENST00000559389 TVP23AA6NH52 213 aa18.83■□□□□ 0.6
SNX1-206ENST00000559389 ABCD4O14678 606 aa18.83■□□□□ 0.6
SNX1-206ENST00000559389 SLC16A6O15403 523 aa18.83■□□□□ 0.6
SNX1-206ENST00000559389 TLX2O43763 284 aaPredicted RBP18.83■□□□□ 0.6
SNX1-206ENST00000559389 SERPINA5P05154 406 aa18.83■□□□□ 0.6
SNX1-206ENST00000559389 CD3EP07766 207 aa18.83■□□□□ 0.6
SNX1-206ENST00000559389 FMO3P31513 532 aa18.83■□□□□ 0.6
SNX1-206ENST00000559389 NAAAQ02083 359 aa18.83■□□□□ 0.6
SNX1-206ENST00000559389 SCRN3Q0VDG4 424 aa18.83■□□□□ 0.6
SNX1-206ENST00000559389 RAB39AQ14964 217 aa18.83■□□□□ 0.6
SNX1-206ENST00000559389 PABPC1L2AQ5JQF8 200 aa18.83■□□□□ 0.6
SNX1-206ENST00000559389 AADACL4Q5VUY2 407 aa18.83■□□□□ 0.6
SNX1-206ENST00000559389 FBXW10Q5XX13 1052 aa18.83■□□□□ 0.6
SNX1-206ENST00000559389 TMEM200AQ86VY9 491 aa18.83■□□□□ 0.6
SNX1-206ENST00000559389 ZNF511Q8NB15 262 aa18.83■□□□□ 0.6
SNX1-206ENST00000559389 OR8J1Q8NGP2 316 aa18.83■□□□□ 0.6
SNX1-206ENST00000559389 WNT5BQ9H1J7 359 aa18.83■□□□□ 0.6
SNX1-206ENST00000559389 CLEC4MQ9H2X3 399 aaPredicted RBP18.83■□□□□ 0.6
SNX1-206ENST00000559389 MARCH7Q9H992 704 aa18.83■□□□□ 0.6
SNX1-206ENST00000559389 IMPAD1Q9NX62 359 aa18.83■□□□□ 0.6
SNX1-206ENST00000559389 TIMM10BQ9Y5J6 103 aa18.83■□□□□ 0.6
SNX1-206ENST00000559389 GMPPBQ9Y5P6 360 aa18.83■□□□□ 0.6
SNX1-206ENST00000559389 UTP20O75691 2785 aaKnown RBP18.83■□□□□ 0.6
SNX1-206ENST00000559389 CCDC182A6NF36 153 aa18.82■□□□□ 0.6
SNX1-206ENST00000559389 PSKH1P11801 424 aa18.82■□□□□ 0.6
SNX1-206ENST00000559389 ADAM8P78325 824 aa18.82■□□□□ 0.6
SNX1-206ENST00000559389 PSG4Q00888 419 aa18.82■□□□□ 0.6
SNX1-206ENST00000559389 APOFQ13790 326 aa18.82■□□□□ 0.6
SNX1-206ENST00000559389 KEAP1Q14145 624 aa18.82■□□□□ 0.6
SNX1-206ENST00000559389 KLHL12Q53G59 568 aa18.82■□□□□ 0.6
SNX1-206ENST00000559389 NXNL2Q5VZ03 156 aa18.82■□□□□ 0.6
SNX1-206ENST00000559389 SLC18B1Q6NT16 456 aa18.82■□□□□ 0.6
SNX1-206ENST00000559389 ADAM5Q6NVV9 412 aa18.82■□□□□ 0.6
SNX1-206ENST00000559389 ZNF704Q6ZNC4 412 aaPredicted RBP18.82■□□□□ 0.6
SNX1-206ENST00000559389 BCDIN3DQ7Z5W3 292 aaKnown RBP18.82■□□□□ 0.6
SNX1-206ENST00000559389 KBTBD8Q8NFY9 601 aa18.82■□□□□ 0.6
SNX1-206ENST00000559389 C1orf198Q9H425 327 aa18.82■□□□□ 0.6
SNX1-206ENST00000559389 WDR76Q9H967 626 aa18.82■□□□□ 0.6
SNX1-206ENST00000559389 LOC100130705A0A1B0GUX0 176 aa18.81■□□□□ 0.6
SNX1-206ENST00000559389 PLAUP00749 431 aa18.81■□□□□ 0.6
SNX1-206ENST00000559389 ZNF823P16415 610 aa18.81■□□□□ 0.6
SNX1-206ENST00000559389 GSTT1P30711 240 aa18.81■□□□□ 0.6
SNX1-206ENST00000559389 ENTPD1P49961 510 aa18.81■□□□□ 0.6
SNX1-206ENST00000559389 HIST1H3AP68431 136 aa18.81■□□□□ 0.6
SNX1-206ENST00000559389 PLP2Q04941 152 aa18.81■□□□□ 0.6
SNX1-206ENST00000559389 HIST2H3PS2Q5TEC6 136 aa18.81■□□□□ 0.6
SNX1-206ENST00000559389 LCN1P1Q5VSP4 162 aa18.81■□□□□ 0.6
SNX1-206ENST00000559389 HIST2H3AQ71DI3 136 aa18.81■□□□□ 0.6
SNX1-206ENST00000559389 LINC00346Q8IVM7 164 aa18.81■□□□□ 0.6
SNX1-206ENST00000559389 GID4Q8IVV7 300 aa18.81■□□□□ 0.6
SNX1-206ENST00000559389 ZNF555Q8NEP9 628 aa18.81■□□□□ 0.6
SNX1-206ENST00000559389 AKR7LQ8NHP1 331 aa18.81■□□□□ 0.6
SNX1-206ENST00000559389 TRUB1Q8WWH5 349 aaKnown RBP18.81■□□□□ 0.6
SNX1-206ENST00000559389 ZMYND19Q96E35 227 aaPredicted RBP18.81■□□□□ 0.6
SNX1-206ENST00000559389 INTS14Q96SY0 518 aa18.81■□□□□ 0.6
SNX1-206ENST00000559389 CYB5R1Q9UHQ9 305 aa18.81■□□□□ 0.6
SNX1-206ENST00000559389 IGHV2OR16-5A0A0B4J2B6 119 aa18.8■□□□□ 0.6
SNX1-206ENST00000559389 IQCMA0A1B0GVH7 501 aa18.8■□□□□ 0.6
SNX1-206ENST00000559389 SHISA9B4DS77 424 aa18.8■□□□□ 0.6
SNX1-206ENST00000559389 ATP6V1G2-DDX39BF2Z307 99 aa18.8■□□□□ 0.6
SNX1-206ENST00000559389 RER1O15258 196 aa18.8■□□□□ 0.6
SNX1-206ENST00000559389 DOK2O60496 412 aa18.8■□□□□ 0.6
SNX1-206ENST00000559389 CRYAAP02489 173 aa18.8■□□□□ 0.6
SNX1-206ENST00000559389 CALCRP30988 508 aa18.8■□□□□ 0.6
SNX1-206ENST00000559389 RPS7P62081 194 aaKnown RBP18.8■□□□□ 0.6
SNX1-206ENST00000559389 PCK2Q16822 640 aa18.8■□□□□ 0.6
SNX1-206ENST00000559389 TEX30Q5JUR7 227 aa18.8■□□□□ 0.6
SNX1-206ENST00000559389 ZNF774Q6NX45 483 aa18.8■□□□□ 0.6
SNX1-206ENST00000559389 CORO6Q6QEF8 472 aa18.8■□□□□ 0.6
SNX1-206ENST00000559389 CFAP77Q6ZQR2 320 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms