RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 SLITRK2Q9H156 845 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 WDR41Q9HAD4 459 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 ROPN1Q9HAT0 212 aaPredicted RBP1.34□□□□□ -2.19
HIF1A-212ENST00000557538 PLGRKTQ9HBL7 147 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 SPHK2Q9NRA0 654 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 SLC2A9Q9NRM0 540 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 NKIRAS1Q9NYS0 192 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 BCAP29Q9UHQ4 241 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 RWDD2AQ9UIY3 292 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 GNPTGQ9UJJ9 305 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 SLC22A13Q9Y226 551 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 IQGAP2Q13576 1575 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 ABCA3Q99758 1704 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 CDC42BPBQ9Y5S2 1711 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 ZNF532Q9HCE3 1301 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 GRIN2BQ13224 1484 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 MYH13Q9UKX3 1938 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 TANC1Q9C0D5 1861 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 SAMD9Q5K651 1589 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 CASKIN1Q8WXD9 1431 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 METTL21EPA6NDL7 271 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 TUBAL3A6NHL2 446 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 TRDCB7Z8K6 153 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 H3BTX0 84 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 M0QXV9 152 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 DNASE2O00115 360 aaPredicted RBP1.34□□□□□ -2.2
HIF1A-212ENST00000557538 PRMT5O14744 637 aaPredicted RBP1.34□□□□□ -2.2
HIF1A-212ENST00000557538 ADAM12O43184 909 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 ZNF749O43361 778 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 GPR75O95800 540 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 CLDN1O95832 211 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 FAM107AO95990 144 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 NDUFB10O96000 172 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 IGHV3-13P01766 116 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 RBP1P09455 135 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 BCKDHAP12694 445 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 GABRA1P14867 456 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 GATA1P15976 413 aaPredicted RBP1.34□□□□□ -2.2
HIF1A-212ENST00000557538 GPX2P18283 190 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 HNF1AP20823 631 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 ATP5A1P25705 553 aaKnown RBP1.34□□□□□ -2.2
HIF1A-212ENST00000557538 UGT1A3P35503 534 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 GRIA1P42261 906 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 LGALS7P47929 136 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 CYB561P49447 251 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 PRKXP51817 358 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 ERVK-25P63136 954 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 MYBPC1Q00872 1141 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 STX5Q13190 355 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 KLF5Q13887 457 aaPredicted RBP1.34□□□□□ -2.2
HIF1A-212ENST00000557538 TFDP2Q14188 446 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 SHHQ15465 462 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 UAP1Q16222 522 aaPredicted RBP1.34□□□□□ -2.2
HIF1A-212ENST00000557538 PAN3Q58A45 887 aaKnown RBP1.34□□□□□ -2.2
HIF1A-212ENST00000557538 OR2B11Q5JQS5 317 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 HACD4Q5VWC8 232 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 TMEM42Q69YG0 159 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 MED27Q6P2C8 311 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 SPESP1Q6UW49 350 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 GCNT7Q6ZNI0 430 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 VTCN1Q7Z7D3 282 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 DPPA2Q7Z7J5 298 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 GALNT10Q86SR1 603 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 SLC47A2Q86VL8 602 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 DHFR2Q86XF0 187 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 TGIF2LXQ8IUE1 241 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 ERI1Q8IV48 349 aaKnown RBP1.34□□□□□ -2.2
HIF1A-212ENST00000557538 MFSD6LQ8IWD5 586 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 ZNF491Q8N8L2 437 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 Q8N9G6 341 aaPredicted RBP1.34□□□□□ -2.2
HIF1A-212ENST00000557538 CCDC54Q8NEL0 328 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 OR52B6Q8NGF0 335 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 OR4A15Q8NGL6 344 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 C11orf40Q8WZ69 217 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 AP3S1Q92572 193 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 ASB9Q96DX5 294 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 L3HYPDHQ96EM0 354 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 C16orf58Q96GQ5 468 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 MAGEB18Q96M61 343 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 MCCC1Q96RQ3 725 aaPredicted RBP1.34□□□□□ -2.2
HIF1A-212ENST00000557538 STACQ99469 402 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 CNPY3Q9BT09 278 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 ZNF416Q9BWM5 594 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 REG4Q9BYZ8 158 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 ACTR6Q9GZN1 396 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 NAT10Q9H0A0 1025 aaKnown RBP1.34□□□□□ -2.2
HIF1A-212ENST00000557538 SIRPDQ9H106 197 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 ARMC7Q9H6L4 198 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 CAB39LQ9H9S4 337 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 TAS2R9Q9NYW1 312 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 NUDT4Q9NZJ9 180 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 FBXL3Q9UKT7 428 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 IKZF3Q9UKT9 509 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 RPL26L1Q9UNX3 145 aaKnown RBP1.34□□□□□ -2.2
HIF1A-212ENST00000557538 MGAT4BQ9UQ53 548 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 WIF1Q9Y5W5 379 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 MTCL1Q9Y4B5 1905 aaKnown RBP1.34□□□□□ -2.2
HIF1A-212ENST00000557538 ABCB11O95342 1321 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 AFF2P51816 1311 aa1.34□□□□□ -2.2
HIF1A-212ENST00000557538 WIZO95785 1651 aa1.34□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms