RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 PLK3Q9H4B4 646 aa9.23□□□□□ -0.93
LINC00239-201ENST00000556973 NTN4Q9HB63 628 aa9.23□□□□□ -0.93
LINC00239-201ENST00000556973 CDH20Q9HBT6 801 aa9.23□□□□□ -0.93
LINC00239-201ENST00000556973 BARX1Q9HBU1 254 aaPredicted RBP9.23□□□□□ -0.93
LINC00239-201ENST00000556973 RPRD1BQ9NQG5 326 aaKnown RBP9.23□□□□□ -0.93
LINC00239-201ENST00000556973 FKBP7Q9Y680 259 aa9.23□□□□□ -0.93
LINC00239-201ENST00000556973 CADP27708 2225 aa9.23□□□□□ -0.93
LINC00239-201ENST00000556973 POLQO75417 2590 aa9.22□□□□□ -0.93
LINC00239-201ENST00000556973 IGLV1-36A0A0B4J1U3 117 aa9.22□□□□□ -0.93
LINC00239-201ENST00000556973 H3BN98 237 aa9.22□□□□□ -0.93
LINC00239-201ENST00000556973 DCTN6O00399 190 aa9.22□□□□□ -0.93
LINC00239-201ENST00000556973 MPZL1O95297 269 aa9.22□□□□□ -0.93
LINC00239-201ENST00000556973 SOX14O95416 240 aa9.22□□□□□ -0.93
LINC00239-201ENST00000556973 IGFBP1P08833 259 aaPredicted RBP9.22□□□□□ -0.93
LINC00239-201ENST00000556973 FCGR1AP12314 374 aa9.22□□□□□ -0.93
LINC00239-201ENST00000556973 CCL2P13500 99 aa9.22□□□□□ -0.93
LINC00239-201ENST00000556973 OSMP13725 252 aa9.22□□□□□ -0.93
LINC00239-201ENST00000556973 CD99P14209 185 aa9.22□□□□□ -0.93
LINC00239-201ENST00000556973 PRKACGP22612 351 aa9.22□□□□□ -0.93
LINC00239-201ENST00000556973 FASP25445 335 aa9.22□□□□□ -0.93
LINC00239-201ENST00000556973 CENPAP49450 140 aa9.22□□□□□ -0.93
LINC00239-201ENST00000556973 GDI2P50395 445 aaKnown RBP9.22□□□□□ -0.93
LINC00239-201ENST00000556973 RPS23P62266 143 aaKnown RBP9.22□□□□□ -0.93
LINC00239-201ENST00000556973 SNRPD2P62316 118 aaKnown RBP9.22□□□□□ -0.93
LINC00239-201ENST00000556973 GLO1Q04760 184 aa9.22□□□□□ -0.93
LINC00239-201ENST00000556973 SCRN3Q0VDG4 424 aa9.22□□□□□ -0.93
LINC00239-201ENST00000556973 AQP6Q13520 282 aa9.22□□□□□ -0.93
LINC00239-201ENST00000556973 SHQ1Q6PI26 577 aaKnown RBP9.22□□□□□ -0.93
LINC00239-201ENST00000556973 C10orf67Q8IYJ2 551 aa9.22□□□□□ -0.93
LINC00239-201ENST00000556973 C1orf174Q8IYL3 243 aa9.22□□□□□ -0.93
LINC00239-201ENST00000556973 PAQR4Q8N4S7 273 aaPredicted RBP9.22□□□□□ -0.93
LINC00239-201ENST00000556973 SDR9C7Q8NEX9 313 aa9.22□□□□□ -0.93
LINC00239-201ENST00000556973 OR5K1Q8NHB7 308 aa9.22□□□□□ -0.93
LINC00239-201ENST00000556973 AKR7LQ8NHP1 331 aa9.22□□□□□ -0.93
LINC00239-201ENST00000556973 TEX47Q8TBZ9 253 aa9.22□□□□□ -0.93
LINC00239-201ENST00000556973 DNAJC9Q8WXX5 260 aa9.22□□□□□ -0.93
LINC00239-201ENST00000556973 C11orf40Q8WZ69 217 aa9.22□□□□□ -0.93
LINC00239-201ENST00000556973 POM121L2Q96KW2 1035 aa9.22□□□□□ -0.93
LINC00239-201ENST00000556973 FOXN4Q96NZ1 517 aa9.22□□□□□ -0.93
LINC00239-201ENST00000556973 DOK1Q99704 481 aa9.22□□□□□ -0.93
LINC00239-201ENST00000556973 TMUB1Q9BVT8 246 aa9.22□□□□□ -0.93
LINC00239-201ENST00000556973 BCL2L14Q9BZR8 327 aa9.22□□□□□ -0.93
LINC00239-201ENST00000556973 WNT5BQ9H1J7 359 aa9.22□□□□□ -0.93
LINC00239-201ENST00000556973 EMC7Q9NPA0 242 aa9.22□□□□□ -0.93
LINC00239-201ENST00000556973 EIF3KQ9UBQ5 218 aaKnown RBP9.22□□□□□ -0.93
LINC00239-201ENST00000556973 REV1Q9UBZ9 1251 aa9.22□□□□□ -0.93
LINC00239-201ENST00000556973 KLHL21Q9UJP4 597 aa9.22□□□□□ -0.93
LINC00239-201ENST00000556973 GDF2Q9UK05 429 aaPredicted RBP9.22□□□□□ -0.93
LINC00239-201ENST00000556973 PRRC2AP48634 2157 aaKnown RBP9.22□□□□□ -0.93
LINC00239-201ENST00000556973 OTOGQ6ZRI0 2925 aa9.21□□□□□ -0.93
LINC00239-201ENST00000556973 LOC100509620A0A075B734 347 aa9.21□□□□□ -0.94
LINC00239-201ENST00000556973 TMEM129A0AVI4 362 aa9.21□□□□□ -0.94
LINC00239-201ENST00000556973 C5orf49A4QMS7 147 aa9.21□□□□□ -0.94
LINC00239-201ENST00000556973 G3V2T6 193 aa9.21□□□□□ -0.94
LINC00239-201ENST00000556973 IFNGP01579 166 aa9.21□□□□□ -0.94
LINC00239-201ENST00000556973 COX5BP10606 129 aa9.21□□□□□ -0.94
LINC00239-201ENST00000556973 FOSL1P15407 271 aa9.21□□□□□ -0.94
LINC00239-201ENST00000556973 CCNOP22674 350 aa9.21□□□□□ -0.94
LINC00239-201ENST00000556973 TEKQ02763 1124 aa9.21□□□□□ -0.94
LINC00239-201ENST00000556973 ATP6AP1Q15904 470 aa9.21□□□□□ -0.94
LINC00239-201ENST00000556973 SLC36A3Q495N2 470 aa9.21□□□□□ -0.94
LINC00239-201ENST00000556973 ZNF774Q6NX45 483 aa9.21□□□□□ -0.94
LINC00239-201ENST00000556973 HIPK1Q86Z02 1210 aa9.21□□□□□ -0.94
LINC00239-201ENST00000556973 HS3ST5Q8IZT8 346 aa9.21□□□□□ -0.94
LINC00239-201ENST00000556973 ATG16L2Q8NAA4 619 aa9.21□□□□□ -0.94
LINC00239-201ENST00000556973 SLC37A3Q8NCC5 494 aa9.21□□□□□ -0.94
LINC00239-201ENST00000556973 GJC3Q8NFK1 279 aa9.21□□□□□ -0.94
LINC00239-201ENST00000556973 OR2T4Q8NH00 348 aa9.21□□□□□ -0.94
LINC00239-201ENST00000556973 OR4Q3Q8NH05 313 aa9.21□□□□□ -0.94
LINC00239-201ENST00000556973 MRPL24Q96A35 216 aaKnown RBP9.21□□□□□ -0.94
LINC00239-201ENST00000556973 CDADC1Q9BWV3 514 aa9.21□□□□□ -0.94
LINC00239-201ENST00000556973 RACGAP1Q9H0H5 632 aa9.21□□□□□ -0.94
LINC00239-201ENST00000556973 ASH2LQ9UBL3 628 aa9.21□□□□□ -0.94
LINC00239-201ENST00000556973 NDRG4Q9ULP0 352 aaKnown RBP9.21□□□□□ -0.94
LINC00239-201ENST00000556973 CREBBPQ92793 2442 aa9.21□□□□□ -0.94
LINC00239-201ENST00000556973 SPG11Q96JI7 2443 aa9.21□□□□□ -0.94
LINC00239-201ENST00000556973 AKAP9Q99996 3911 aa9.2□□□□□ -0.94
LINC00239-201ENST00000556973 FAM171A2A8MVW0 826 aa9.2□□□□□ -0.94
LINC00239-201ENST00000556973 SGCEO43556 437 aa9.2□□□□□ -0.94
LINC00239-201ENST00000556973 SSX4O60224 188 aa9.2□□□□□ -0.94
LINC00239-201ENST00000556973 GPRIN2O60269 458 aa9.2□□□□□ -0.94
LINC00239-201ENST00000556973 ICMTO60725 284 aa9.2□□□□□ -0.94
LINC00239-201ENST00000556973 NDUFS7O75251 213 aa9.2□□□□□ -0.94
LINC00239-201ENST00000556973 GPANK1O95872 356 aa9.2□□□□□ -0.94
LINC00239-201ENST00000556973 F12P00748 615 aaPredicted RBP9.2□□□□□ -0.94
LINC00239-201ENST00000556973 IGHV4-39P01824 125 aa9.2□□□□□ -0.94
LINC00239-201ENST00000556973 HLA-DQA2P01906 255 aa9.2□□□□□ -0.94
LINC00239-201ENST00000556973 FAM157BP0CG42 384 aa9.2□□□□□ -0.94
LINC00239-201ENST00000556973 GAAP10253 952 aa9.2□□□□□ -0.94
LINC00239-201ENST00000556973 POU1F1P28069 291 aa9.2□□□□□ -0.94
LINC00239-201ENST00000556973 GRK5P34947 590 aa9.2□□□□□ -0.94
LINC00239-201ENST00000556973 PPOXP50336 477 aa9.2□□□□□ -0.94
LINC00239-201ENST00000556973 EFNA4P52798 201 aa9.2□□□□□ -0.94
LINC00239-201ENST00000556973 SELENOVP59797 346 aa9.2□□□□□ -0.94
LINC00239-201ENST00000556973 ACTR3P61158 418 aa9.2□□□□□ -0.94
LINC00239-201ENST00000556973 CDK5Q00535 292 aa9.2□□□□□ -0.94
LINC00239-201ENST00000556973 CLEC12BQ2HXU8 276 aa9.2□□□□□ -0.94
LINC00239-201ENST00000556973 RGS7BPQ6MZT1 257 aaPredicted RBP9.2□□□□□ -0.94
LINC00239-201ENST00000556973 SLC27A4Q6P1M0 643 aa9.2□□□□□ -0.94
LINC00239-201ENST00000556973 ARL9Q6T311 187 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms