RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 FTHL17Q9BXU8 183 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 BARHL1Q9BZE3 327 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 CIPCQ9C0C6 399 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 C11orf54Q9H0W9 315 aaPredicted RBP5.59□□□□□ -1.51
TDP1-215ENST00000556498 S1PR5Q9H228 398 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 EGLN3Q9H6Z9 239 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 WDR76Q9H967 626 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 SERHLQ9NQF3 203 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 ECHDC1Q9NTX5 307 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 TMEM38BQ9NVV0 291 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 NECAP2Q9NVZ3 263 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 AURKAIP1Q9NWT8 199 aaPredicted RBP5.59□□□□□ -1.51
TDP1-215ENST00000556498 DKK4Q9UBT3 224 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 PRODH2Q9UF12 536 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 ZNF222Q9UK12 451 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 MEMO1Q9Y316 297 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 AK6Q9Y3D8 172 aaKnown RBP5.59□□□□□ -1.51
TDP1-215ENST00000556498 STYXL1Q9Y6J8 313 aa5.59□□□□□ -1.51
TDP1-215ENST00000556498 NRXN3Q9Y4C0 1643 aa5.59□□□□□ -1.52
TDP1-215ENST00000556498 TULP4Q9NRJ4 1543 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 CHD5Q8TDI0 1954 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 ATRNO75882 1429 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 C10orf71Q711Q0 1435 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 KIR2DL5BA0A0G2JN68 375 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 KIR2DL5BA0A0G2JPC4 375 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 A0A1W2PR80 420 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 ANKRD20A5PA0PJZ0 165 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 TMEM200CA6NKL6 621 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 ZNF705EA8MWA4 302 aaPredicted RBP5.58□□□□□ -1.52
TDP1-215ENST00000556498 G3V4G9 280 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 M0QXV9 152 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 ETV2O00321 342 aaPredicted RBP5.58□□□□□ -1.52
TDP1-215ENST00000556498 MANBAO00462 879 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 SOCS2O14508 198 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 NRP2O60462 931 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 RCBTB2O95199 551 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 GJB5O95377 273 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 CNIH1O95406 144 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 CLIC3O95833 236 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 LCATP04180 440 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 FCER1AP12319 257 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 IL2RBP14784 551 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 ST6GAL1P15907 406 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 CELP19835 753 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 KLRK1P26718 216 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 DUSP1P28562 367 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 AKT2P31751 481 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 CSF2RBP32927 897 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 TNFSF8P32971 234 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 PXNP49023 591 aaPredicted RBP5.58□□□□□ -1.52
TDP1-215ENST00000556498 AKR1C2P52895 323 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 CTBP2P56545 445 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 RPL7AP62424 266 aaKnown RBP5.58□□□□□ -1.52
TDP1-215ENST00000556498 GPR18Q14330 331 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 ZNF234Q14588 700 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 PDCD1Q15116 288 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 TCTN1Q2MV58 587 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 ITPRIPL2Q3MIP1 535 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 UNC50Q53HI1 259 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 FBLN7Q53RD9 439 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 TMEM268Q5VZI3 342 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 CST9Q5W186 159 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 SAXO2Q658L1 398 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 OR4A47Q6IF82 309 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 FAM71F2Q6NXP2 309 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 DNAJC24Q6P3W2 148 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 IL34Q6ZMJ4 242 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 GLT6D1Q7Z4J2 308 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 C5orf24Q7Z6I8 188 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 SERPINA11Q86U17 422 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 PARGQ86W56 976 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 PHYKPLQ8IUZ5 450 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 UEVLDQ8IX04 471 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 KIR2DL5AQ8N109 375 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 OR6V1Q8N148 313 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 HIST3H2BBQ8N257 126 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 LRRC57Q8N9N7 239 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 SLC26A10Q8NG04 563 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 OR5A2Q8NGI9 324 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 OR5W2Q8NH69 310 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 RDH11Q8TC12 318 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 CD99L2Q8TCZ2 262 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 FAM151AQ8WW52 585 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 NRGNQ92686 78 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 EMG1Q92979 244 aaKnown RBP5.58□□□□□ -1.52
TDP1-215ENST00000556498 PIGTQ969N2 578 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 MSLNLQ96KJ4 702 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 ZFP3Q96NJ6 502 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 ACCSQ96QU6 501 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 PKMYT1Q99640 499 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 FOXB1Q99853 325 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 RTP3Q9BQQ7 232 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 SYT11Q9BT88 431 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 RAB11FIP5Q9BXF6 653 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 ZBP1Q9H171 429 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 OR51E2Q9H255 320 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 SLC32A1Q9H598 525 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 UBE2ZQ9H832 354 aaPredicted RBP5.58□□□□□ -1.52
TDP1-215ENST00000556498 ACTR8Q9H981 624 aa5.58□□□□□ -1.52
TDP1-215ENST00000556498 Q9N2J8 555 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms