RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 ARL9Q6T311 187 aa11.64□□□□□ -0.55
ACTN1-219ENST00000556432 HDDC2Q7Z4H3 204 aa11.64□□□□□ -0.55
ACTN1-219ENST00000556432 ALDH16A1Q8IZ83 802 aa11.64□□□□□ -0.55
ACTN1-219ENST00000556432 OR8B3Q8NGG8 313 aa11.64□□□□□ -0.55
ACTN1-219ENST00000556432 TBC1D15Q8TC07 691 aa11.64□□□□□ -0.55
ACTN1-219ENST00000556432 DYRK2Q92630 601 aa11.64□□□□□ -0.55
ACTN1-219ENST00000556432 NSMAFQ92636 917 aa11.64□□□□□ -0.55
ACTN1-219ENST00000556432 OR2V2Q96R30 315 aa11.64□□□□□ -0.55
ACTN1-219ENST00000556432 OR8B2Q96RD0 313 aa11.64□□□□□ -0.55
ACTN1-219ENST00000556432 PCGF1Q9BSM1 259 aa11.64□□□□□ -0.55
ACTN1-219ENST00000556432 WDR55Q9H6Y2 383 aaPredicted RBP11.64□□□□□ -0.55
ACTN1-219ENST00000556432 MAN2C1Q9NTJ4 1040 aa11.64□□□□□ -0.55
ACTN1-219ENST00000556432 MIOXQ9UGB7 285 aa11.64□□□□□ -0.55
ACTN1-219ENST00000556432 KIR2DS1A0A191URI9 304 aa11.63□□□□□ -0.55
ACTN1-219ENST00000556432 TYROBPO43914 113 aa11.63□□□□□ -0.55
ACTN1-219ENST00000556432 MGRN1O60291 552 aa11.63□□□□□ -0.55
ACTN1-219ENST00000556432 ABHD16AO95870 558 aa11.63□□□□□ -0.55
ACTN1-219ENST00000556432 IDO1P14902 403 aa11.63□□□□□ -0.55
ACTN1-219ENST00000556432 BGNP21810 368 aa11.63□□□□□ -0.55
ACTN1-219ENST00000556432 PITPNBP48739 271 aa11.63□□□□□ -0.55
ACTN1-219ENST00000556432 MMP16P51512 607 aa11.63□□□□□ -0.55
ACTN1-219ENST00000556432 PROK1P58294 105 aa11.63□□□□□ -0.55
ACTN1-219ENST00000556432 BPIFB3P59826 476 aa11.63□□□□□ -0.55
ACTN1-219ENST00000556432 RPL15P61313 204 aaKnown RBP11.63□□□□□ -0.55
ACTN1-219ENST00000556432 MRPS34P82930 218 aaKnown RBP11.63□□□□□ -0.55
ACTN1-219ENST00000556432 CDK6Q00534 326 aa11.63□□□□□ -0.55
ACTN1-219ENST00000556432 PSG4Q00888 419 aa11.63□□□□□ -0.55
ACTN1-219ENST00000556432 CD47Q08722 323 aa11.63□□□□□ -0.55
ACTN1-219ENST00000556432 STX3Q13277 289 aa11.63□□□□□ -0.55
ACTN1-219ENST00000556432 TTC33Q6PID6 262 aaPredicted RBP11.63□□□□□ -0.55
ACTN1-219ENST00000556432 MSANTD1Q6ZTZ1 278 aa11.63□□□□□ -0.55
ACTN1-219ENST00000556432 VASH1Q7L8A9 365 aaPredicted RBP11.63□□□□□ -0.55
ACTN1-219ENST00000556432 ARMC8Q8IUR7 673 aa11.63□□□□□ -0.55
ACTN1-219ENST00000556432 ATG16L2Q8NAA4 619 aa11.63□□□□□ -0.55
ACTN1-219ENST00000556432 MRAPQ8TCY5 172 aa11.63□□□□□ -0.55
ACTN1-219ENST00000556432 NEIL1Q96FI4 390 aaPredicted RBP11.63□□□□□ -0.55
ACTN1-219ENST00000556432 C4orf45Q96LM5 186 aa11.63□□□□□ -0.55
ACTN1-219ENST00000556432 ZNF607Q96SK3 696 aa11.63□□□□□ -0.55
ACTN1-219ENST00000556432 MCHR1Q99705 422 aa11.63□□□□□ -0.55
ACTN1-219ENST00000556432 OR2H1Q9GZK4 316 aa11.63□□□□□ -0.55
ACTN1-219ENST00000556432 SLCO1B3Q9NPD5 702 aa11.63□□□□□ -0.55
ACTN1-219ENST00000556432 IL19Q9UHD0 177 aa11.63□□□□□ -0.55
ACTN1-219ENST00000556432 ZNF229Q9UJW7 825 aa11.63□□□□□ -0.55
ACTN1-219ENST00000556432 CPSF4LA6NMK7 179 aaKnown RBP11.62□□□□□ -0.55
ACTN1-219ENST00000556432 M0R3H8 397 aa11.62□□□□□ -0.55
ACTN1-219ENST00000556432 BIRC5O15392 142 aa11.62□□□□□ -0.55
ACTN1-219ENST00000556432 CHP2O43745 196 aa11.62□□□□□ -0.55
ACTN1-219ENST00000556432 TPST2O60704 377 aa11.62□□□□□ -0.55
ACTN1-219ENST00000556432 FMO6PO60774 539 aa11.62□□□□□ -0.55
ACTN1-219ENST00000556432 TRMUO75648 421 aaKnown RBP11.62□□□□□ -0.55
ACTN1-219ENST00000556432 CYB5R3P00387 301 aaPredicted RBP11.62□□□□□ -0.55
ACTN1-219ENST00000556432 F13BP05160 661 aa11.62□□□□□ -0.55
ACTN1-219ENST00000556432 BMP2P12643 396 aa11.62□□□□□ -0.55
ACTN1-219ENST00000556432 ACADSP16219 412 aa11.62□□□□□ -0.55
ACTN1-219ENST00000556432 CPT2P23786 658 aa11.62□□□□□ -0.55
ACTN1-219ENST00000556432 DAP3P51398 398 aaKnown RBP11.62□□□□□ -0.55
ACTN1-219ENST00000556432 POLR2JP52435 117 aaKnown RBP11.62□□□□□ -0.55
ACTN1-219ENST00000556432 HIST3H3Q16695 136 aa11.62□□□□□ -0.55
ACTN1-219ENST00000556432 ZNF613Q6PF04 617 aa11.62□□□□□ -0.55
ACTN1-219ENST00000556432 Q6ZR03 302 aa11.62□□□□□ -0.55
ACTN1-219ENST00000556432 REC114Q7Z4M0 266 aa11.62□□□□□ -0.55
ACTN1-219ENST00000556432 FITM2Q8N6M3 262 aa11.62□□□□□ -0.55
ACTN1-219ENST00000556432 GOLGA6L1Q8N7Z2 621 aa11.62□□□□□ -0.55
ACTN1-219ENST00000556432 VANGL1Q8TAA9 524 aaPredicted RBP11.62□□□□□ -0.55
ACTN1-219ENST00000556432 ASB10Q8WXI3 467 aa11.62□□□□□ -0.55
ACTN1-219ENST00000556432 WFDC6Q9BQY6 131 aa11.62□□□□□ -0.55
ACTN1-219ENST00000556432 WNT5BQ9H1J7 359 aa11.62□□□□□ -0.55
ACTN1-219ENST00000556432 GCM1Q9NP62 436 aa11.62□□□□□ -0.55
ACTN1-219ENST00000556432 CLN8Q9UBY8 286 aa11.62□□□□□ -0.55
ACTN1-219ENST00000556432 ANGPT4Q9Y264 503 aa11.62□□□□□ -0.55
ACTN1-219ENST00000556432 C5orf63A6NC05 138 aa11.61□□□□□ -0.55
ACTN1-219ENST00000556432 TRPC5OSA6NMA1 111 aa11.61□□□□□ -0.55
ACTN1-219ENST00000556432 IFNL4K9M1U5 179 aa11.61□□□□□ -0.55
ACTN1-219ENST00000556432 ENSAO43768 121 aaKnown RBP11.61□□□□□ -0.55
ACTN1-219ENST00000556432 SERPINB7O75635 380 aa11.61□□□□□ -0.55
ACTN1-219ENST00000556432 IGHV4-59P01825 116 aa11.61□□□□□ -0.55
ACTN1-219ENST00000556432 SLC6A2P23975 617 aa11.61□□□□□ -0.55
ACTN1-219ENST00000556432 GUCA1AP43080 201 aaPredicted RBP11.61□□□□□ -0.55
ACTN1-219ENST00000556432 FMODQ06828 376 aa11.61□□□□□ -0.55
ACTN1-219ENST00000556432 BST1Q10588 318 aa11.61□□□□□ -0.55
ACTN1-219ENST00000556432 SCARB2Q14108 478 aa11.61□□□□□ -0.55
ACTN1-219ENST00000556432 C10orf128Q5T292 105 aa11.61□□□□□ -0.55
ACTN1-219ENST00000556432 SLC2A7Q6PXP3 512 aa11.61□□□□□ -0.55
ACTN1-219ENST00000556432 EIF1ADQ8N9N8 165 aaKnown RBP11.61□□□□□ -0.55
ACTN1-219ENST00000556432 SMYD1Q8NB12 490 aa11.61□□□□□ -0.55
ACTN1-219ENST00000556432 NPEPL1Q8NDH3 523 aa11.61□□□□□ -0.55
ACTN1-219ENST00000556432 ZNF420Q8TAQ5 688 aaPredicted RBP11.61□□□□□ -0.55
ACTN1-219ENST00000556432 GATAD2BQ8WXI9 593 aa11.61□□□□□ -0.55
ACTN1-219ENST00000556432 NABP1Q96AH0 204 aa11.61□□□□□ -0.55
ACTN1-219ENST00000556432 DACT3Q96B18 629 aaPredicted RBP11.61□□□□□ -0.55
ACTN1-219ENST00000556432 CMBLQ96DG6 245 aa11.61□□□□□ -0.55
ACTN1-219ENST00000556432 MAGEB18Q96M61 343 aa11.61□□□□□ -0.55
ACTN1-219ENST00000556432 TMEM246Q9BRR3 403 aa11.61□□□□□ -0.55
ACTN1-219ENST00000556432 CDADC1Q9BWV3 514 aa11.61□□□□□ -0.55
ACTN1-219ENST00000556432 MRPL13Q9BYD1 178 aaKnown RBP11.61□□□□□ -0.55
ACTN1-219ENST00000556432 PAIP1Q9H074 479 aaKnown RBP11.61□□□□□ -0.55
ACTN1-219ENST00000556432 POFUT1Q9H488 388 aa11.61□□□□□ -0.55
ACTN1-219ENST00000556432 TMEM165Q9HC07 324 aa11.61□□□□□ -0.55
ACTN1-219ENST00000556432 HAO1Q9UJM8 370 aa11.61□□□□□ -0.55
ACTN1-219ENST00000556432 UGT2A1Q9Y4X1 527 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms