RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 TMEM14AQ9Y6G1 99 aa10.91□□□□□ -0.66
SHMT2-221ENST00000555773 COMMD3-BMI1R4GMX3 469 aa10.91□□□□□ -0.66
SHMT2-221ENST00000555773 NCOA6Q14686 2063 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-221ENST00000555773 DOPEY1Q5JWR5 2465 aa10.9□□□□□ -0.66
SHMT2-221ENST00000555773 EFCAB10A6NFE3 127 aa10.9□□□□□ -0.66
SHMT2-221ENST00000555773 SEC14L2O76054 403 aa10.9□□□□□ -0.66
SHMT2-221ENST00000555773 FADS2O95864 444 aaKnown RBP10.9□□□□□ -0.66
SHMT2-221ENST00000555773 GPANK1O95872 356 aa10.9□□□□□ -0.66
SHMT2-221ENST00000555773 SBK2P0C263 348 aa10.9□□□□□ -0.66
SHMT2-221ENST00000555773 CCDC159P0C7I6 412 aa10.9□□□□□ -0.66
SHMT2-221ENST00000555773 OR2T7P0C7T2 308 aa10.9□□□□□ -0.66
SHMT2-221ENST00000555773 DBTP11182 482 aaKnown RBP10.9□□□□□ -0.66
SHMT2-221ENST00000555773 SLC15A1P46059 708 aa10.9□□□□□ -0.66
SHMT2-221ENST00000555773 ZNF91Q05481 1191 aa10.9□□□□□ -0.66
SHMT2-221ENST00000555773 RAB40BQ12829 278 aa10.9□□□□□ -0.66
SHMT2-221ENST00000555773 AQP6Q13520 282 aa10.9□□□□□ -0.66
SHMT2-221ENST00000555773 TSC22D1Q15714 1073 aa10.9□□□□□ -0.66
SHMT2-221ENST00000555773 SMN1Q16637 294 aaKnown RBP10.9□□□□□ -0.66
SHMT2-221ENST00000555773 HIKESHIQ53FT3 197 aa10.9□□□□□ -0.66
SHMT2-221ENST00000555773 LAIR2Q6ISS4 152 aa10.9□□□□□ -0.66
SHMT2-221ENST00000555773 TMEM53Q6P2H8 277 aa10.9□□□□□ -0.66
SHMT2-221ENST00000555773 UGT2A3Q6UWM9 527 aa10.9□□□□□ -0.66
SHMT2-221ENST00000555773 B3GLCTQ6Y288 498 aa10.9□□□□□ -0.66
SHMT2-221ENST00000555773 ERI1Q8IV48 349 aaKnown RBP10.9□□□□□ -0.66
SHMT2-221ENST00000555773 LRRC18Q8N456 261 aa10.9□□□□□ -0.66
SHMT2-221ENST00000555773 GJC3Q8NFK1 279 aa10.9□□□□□ -0.66
SHMT2-221ENST00000555773 BPIFB6Q8NFQ5 453 aa10.9□□□□□ -0.66
SHMT2-221ENST00000555773 OR2AJ1Q8NGZ0 328 aa10.9□□□□□ -0.66
SHMT2-221ENST00000555773 OR2T27Q8NH04 317 aa10.9□□□□□ -0.66
SHMT2-221ENST00000555773 FBXO17Q96EF6 278 aa10.9□□□□□ -0.66
SHMT2-221ENST00000555773 RNFT2Q96EX2 444 aa10.9□□□□□ -0.66
SHMT2-221ENST00000555773 CNN2Q99439 309 aaKnown RBP10.9□□□□□ -0.66
SHMT2-221ENST00000555773 RNF121Q9H920 327 aa10.9□□□□□ -0.66
SHMT2-221ENST00000555773 WDR76Q9H967 626 aa10.9□□□□□ -0.66
SHMT2-221ENST00000555773 ADGRL4Q9HBW9 690 aa10.9□□□□□ -0.66
SHMT2-221ENST00000555773 AMBNQ9NP70 447 aa10.9□□□□□ -0.66
SHMT2-221ENST00000555773 EMC7Q9NPA0 242 aa10.9□□□□□ -0.66
SHMT2-221ENST00000555773 CCNB1IP1Q9NPC3 277 aa10.9□□□□□ -0.66
SHMT2-221ENST00000555773 B3GNT2Q9NY97 397 aa10.9□□□□□ -0.66
SHMT2-221ENST00000555773 CNOT2Q9NZN8 540 aaKnown RBP10.9□□□□□ -0.66
SHMT2-221ENST00000555773 FBXL3Q9UKT7 428 aa10.9□□□□□ -0.66
SHMT2-221ENST00000555773 EXOGQ9Y2C4 368 aaKnown RBP10.9□□□□□ -0.66
SHMT2-221ENST00000555773 POLR1DQ9Y2S0 133 aa10.9□□□□□ -0.66
SHMT2-221ENST00000555773 PTHP01270 115 aa10.89□□□□□ -0.67
SHMT2-221ENST00000555773 MMP7P09237 267 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-221ENST00000555773 PIPP12273 146 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-221ENST00000555773 CBR1P16152 277 aa10.89□□□□□ -0.67
SHMT2-221ENST00000555773 CAPZA2P47755 286 aa10.89□□□□□ -0.67
SHMT2-221ENST00000555773 NUDT6P53370 316 aa10.89□□□□□ -0.67
SHMT2-221ENST00000555773 RAB1AP62820 205 aa10.89□□□□□ -0.67
SHMT2-221ENST00000555773 HIST1H3AP68431 136 aa10.89□□□□□ -0.67
SHMT2-221ENST00000555773 SCRN3Q0VDG4 424 aa10.89□□□□□ -0.67
SHMT2-221ENST00000555773 MEP1BQ16820 701 aa10.89□□□□□ -0.67
SHMT2-221ENST00000555773 RBM48Q5RL73 367 aaKnown RBP10.89□□□□□ -0.67
SHMT2-221ENST00000555773 HIST2H3PS2Q5TEC6 136 aa10.89□□□□□ -0.67
SHMT2-221ENST00000555773 LYPD4Q6UWN0 246 aa10.89□□□□□ -0.67
SHMT2-221ENST00000555773 HIST2H3AQ71DI3 136 aa10.89□□□□□ -0.67
SHMT2-221ENST00000555773 RHOUQ7L0Q8 258 aa10.89□□□□□ -0.67
SHMT2-221ENST00000555773 DPY19L4Q7Z388 723 aa10.89□□□□□ -0.67
SHMT2-221ENST00000555773 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-221ENST00000555773 ALDH16A1Q8IZ83 802 aa10.89□□□□□ -0.67
SHMT2-221ENST00000555773 OR51G2Q8NGK0 314 aa10.89□□□□□ -0.67
SHMT2-221ENST00000555773 OR6N2Q8NGY6 317 aa10.89□□□□□ -0.67
SHMT2-221ENST00000555773 OTOSQ8NHW6 89 aa10.89□□□□□ -0.67
SHMT2-221ENST00000555773 GGHQ92820 318 aa10.89□□□□□ -0.67
SHMT2-221ENST00000555773 LGALS12Q96DT0 336 aa10.89□□□□□ -0.67
SHMT2-221ENST00000555773 MYCBPQ99417 103 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-221ENST00000555773 C1orf198Q9H425 327 aa10.89□□□□□ -0.67
SHMT2-221ENST00000555773 SLC24A3Q9HC58 644 aa10.89□□□□□ -0.67
SHMT2-221ENST00000555773 UBAP1Q9NZ09 502 aa10.89□□□□□ -0.67
SHMT2-221ENST00000555773 ASH2LQ9UBL3 628 aa10.89□□□□□ -0.67
SHMT2-221ENST00000555773 PSORS1C1Q9UIG5 152 aa10.89□□□□□ -0.67
SHMT2-221ENST00000555773 TPRKBQ9Y3C4 175 aa10.89□□□□□ -0.67
SHMT2-221ENST00000555773 SLC25A15Q9Y619 301 aa10.89□□□□□ -0.67
SHMT2-221ENST00000555773 UBR5O95071 2799 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-221ENST00000555773 USP9XQ93008 2570 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-221ENST00000555773 FLNCQ14315 2725 aa10.88□□□□□ -0.67
SHMT2-221ENST00000555773 TUBAL3A6NHL2 446 aa10.88□□□□□ -0.67
SHMT2-221ENST00000555773 J3QRE1 110 aa10.88□□□□□ -0.67
SHMT2-221ENST00000555773 PHYHO14832 338 aa10.88□□□□□ -0.67
SHMT2-221ENST00000555773 SELENOFO60613 162 aa10.88□□□□□ -0.67
SHMT2-221ENST00000555773 HLA-HP01893 362 aa10.88□□□□□ -0.67
SHMT2-221ENST00000555773 SPARCP09486 303 aa10.88□□□□□ -0.67
SHMT2-221ENST00000555773 CD79AP11912 226 aa10.88□□□□□ -0.67
SHMT2-221ENST00000555773 ZNF32P17041 273 aa10.88□□□□□ -0.67
SHMT2-221ENST00000555773 ALOX5APP20292 161 aa10.88□□□□□ -0.67
SHMT2-221ENST00000555773 DCKP27707 260 aa10.88□□□□□ -0.67
SHMT2-221ENST00000555773 CCKARP32238 428 aa10.88□□□□□ -0.67
SHMT2-221ENST00000555773 ACTC1P68032 377 aa10.88□□□□□ -0.67
SHMT2-221ENST00000555773 ACTA1P68133 377 aa10.88□□□□□ -0.67
SHMT2-221ENST00000555773 PLP2Q04941 152 aa10.88□□□□□ -0.67
SHMT2-221ENST00000555773 PPA1Q15181 289 aa10.88□□□□□ -0.67
SHMT2-221ENST00000555773 TAB1Q15750 504 aa10.88□□□□□ -0.67
SHMT2-221ENST00000555773 GSG1Q2KHT4 349 aa10.88□□□□□ -0.67
SHMT2-221ENST00000555773 C3orf36Q3SXR2 165 aa10.88□□□□□ -0.67
SHMT2-221ENST00000555773 SLC18B1Q6NT16 456 aa10.88□□□□□ -0.67
SHMT2-221ENST00000555773 CDC20BQ86Y33 519 aa10.88□□□□□ -0.67
SHMT2-221ENST00000555773 EGFL6Q8IUX8 553 aa10.88□□□□□ -0.67
SHMT2-221ENST00000555773 SLC35F2Q8IXU6 374 aa10.88□□□□□ -0.67
SHMT2-221ENST00000555773 OR52N5Q8NH56 324 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms