RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 PLA2G12AQ9BZM1 189 aa11.81□□□□□ -0.52
SHMT2-219ENST00000555563 NUAK2Q9H093 628 aa11.81□□□□□ -0.52
SHMT2-219ENST00000555563 DYNLRB1Q9NP97 96 aa11.81□□□□□ -0.52
SHMT2-219ENST00000555563 FZR1Q9UM11 496 aa11.81□□□□□ -0.52
SHMT2-219ENST00000555563 COA3Q9Y2R0 106 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-219ENST00000555563 FKBP7Q9Y680 259 aa11.81□□□□□ -0.52
SHMT2-219ENST00000555563 LOC100509620A0A075B734 347 aa11.8□□□□□ -0.52
SHMT2-219ENST00000555563 IGHV4-30-2A0A087WSY4 118 aa11.8□□□□□ -0.52
SHMT2-219ENST00000555563 C12orf71A8MTZ7 269 aa11.8□□□□□ -0.52
SHMT2-219ENST00000555563 DCTN6O00399 190 aa11.8□□□□□ -0.52
SHMT2-219ENST00000555563 GSC2O15499 205 aa11.8□□□□□ -0.52
SHMT2-219ENST00000555563 MPZL1O95297 269 aa11.8□□□□□ -0.52
SHMT2-219ENST00000555563 SOX14O95416 240 aa11.8□□□□□ -0.52
SHMT2-219ENST00000555563 GPANK1O95872 356 aa11.8□□□□□ -0.52
SHMT2-219ENST00000555563 CST1P01037 141 aa11.8□□□□□ -0.52
SHMT2-219ENST00000555563 IGFBP1P08833 259 aaPredicted RBP11.8□□□□□ -0.52
SHMT2-219ENST00000555563 CCNOP22674 350 aa11.8□□□□□ -0.52
SHMT2-219ENST00000555563 NOS3P29474 1203 aa11.8□□□□□ -0.52
SHMT2-219ENST00000555563 ERFP50548 548 aa11.8□□□□□ -0.52
SHMT2-219ENST00000555563 PCBD1P61457 104 aa11.8□□□□□ -0.52
SHMT2-219ENST00000555563 MICAQ29983 383 aa11.8□□□□□ -0.52
SHMT2-219ENST00000555563 RPL13AP3Q6NVV1 102 aa11.8□□□□□ -0.52
SHMT2-219ENST00000555563 ZNF774Q6NX45 483 aa11.8□□□□□ -0.52
SHMT2-219ENST00000555563 LEG1Q6P5S2 330 aa11.8□□□□□ -0.52
SHMT2-219ENST00000555563 DNM1P34Q6PK57 102 aa11.8□□□□□ -0.52
SHMT2-219ENST00000555563 CLEC9AQ6UXN8 241 aa11.8□□□□□ -0.52
SHMT2-219ENST00000555563 RASSF6Q6ZTQ3 369 aa11.8□□□□□ -0.52
SHMT2-219ENST00000555563 LRP11Q86VZ4 500 aa11.8□□□□□ -0.52
SHMT2-219ENST00000555563 SPATA24Q86W54 205 aa11.8□□□□□ -0.52
SHMT2-219ENST00000555563 ZNF101Q8IZC7 436 aa11.8□□□□□ -0.52
SHMT2-219ENST00000555563 MAPK1IP1LQ8NDC0 245 aa11.8□□□□□ -0.52
SHMT2-219ENST00000555563 OR10G2Q8NGC3 310 aa11.8□□□□□ -0.52
SHMT2-219ENST00000555563 SNX18Q96RF0 628 aa11.8□□□□□ -0.52
SHMT2-219ENST00000555563 DGCR6LQ9BY27 220 aa11.8□□□□□ -0.52
SHMT2-219ENST00000555563 REG4Q9BYZ8 158 aa11.8□□□□□ -0.52
SHMT2-219ENST00000555563 LRMDAQ9H2I8 198 aa11.8□□□□□ -0.52
SHMT2-219ENST00000555563 FN3KQ9H479 309 aa11.8□□□□□ -0.52
SHMT2-219ENST00000555563 MYEF2Q9P2K5 600 aaKnown RBP11.8□□□□□ -0.52
SHMT2-219ENST00000555563 TIMM10BQ9Y5J6 103 aa11.8□□□□□ -0.52
SHMT2-219ENST00000555563 IGLV1-36A0A0B4J1U3 117 aa11.79□□□□□ -0.52
SHMT2-219ENST00000555563 TCRBV3S1A0A5B6 114 aa11.79□□□□□ -0.52
SHMT2-219ENST00000555563 C5orf49A4QMS7 147 aa11.79□□□□□ -0.52
SHMT2-219ENST00000555563 M0R233 179 aa11.79□□□□□ -0.52
SHMT2-219ENST00000555563 BHLHE40O14503 412 aa11.79□□□□□ -0.52
SHMT2-219ENST00000555563 DOK2O60496 412 aa11.79□□□□□ -0.52
SHMT2-219ENST00000555563 F12P00748 615 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-219ENST00000555563 RENP00797 406 aa11.79□□□□□ -0.52
SHMT2-219ENST00000555563 GAAP10253 952 aa11.79□□□□□ -0.52
SHMT2-219ENST00000555563 PCSK6P29122 969 aa11.79□□□□□ -0.52
SHMT2-219ENST00000555563 WNT5AP41221 380 aa11.79□□□□□ -0.52
SHMT2-219ENST00000555563 EVX1P49640 407 aa11.79□□□□□ -0.52
SHMT2-219ENST00000555563 GDI2P50395 445 aaKnown RBP11.79□□□□□ -0.52
SHMT2-219ENST00000555563 SCRN3Q0VDG4 424 aa11.79□□□□□ -0.52
SHMT2-219ENST00000555563 AQP6Q13520 282 aa11.79□□□□□ -0.52
SHMT2-219ENST00000555563 GK3PQ14409 553 aa11.79□□□□□ -0.52
SHMT2-219ENST00000555563 MAD2L1BPQ15013 274 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-219ENST00000555563 SLC35F1Q5T1Q4 408 aa11.79□□□□□ -0.52
SHMT2-219ENST00000555563 RGS7BPQ6MZT1 257 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-219ENST00000555563 Q71RC1 249 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-219ENST00000555563 SYT9Q86SS6 491 aa11.79□□□□□ -0.52
SHMT2-219ENST00000555563 OR6V1Q8N148 313 aa11.79□□□□□ -0.52
SHMT2-219ENST00000555563 ZCCHC24Q8N2G6 241 aaKnown RBP11.79□□□□□ -0.52
SHMT2-219ENST00000555563 SDR9C7Q8NEX9 313 aa11.79□□□□□ -0.52
SHMT2-219ENST00000555563 OR10H5Q8NGA6 315 aa11.79□□□□□ -0.52
SHMT2-219ENST00000555563 C11orf40Q8WZ69 217 aa11.79□□□□□ -0.52
SHMT2-219ENST00000555563 RHNO1Q9BSD3 238 aa11.79□□□□□ -0.52
SHMT2-219ENST00000555563 RACGAP1Q9H0H5 632 aa11.79□□□□□ -0.52
SHMT2-219ENST00000555563 RPRD1BQ9NQG5 326 aaKnown RBP11.79□□□□□ -0.52
SHMT2-219ENST00000555563 TBC1D23Q9NUY8 699 aa11.79□□□□□ -0.52
SHMT2-219ENST00000555563 IL20Q9NYY1 176 aa11.79□□□□□ -0.52
SHMT2-219ENST00000555563 ASH2LQ9UBL3 628 aa11.79□□□□□ -0.52
SHMT2-219ENST00000555563 FBXO9Q9UK97 447 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-219ENST00000555563 CR1P17927 2039 aa11.78□□□□□ -0.52
SHMT2-219ENST00000555563 A0A096LNT2 108 aa11.78□□□□□ -0.52
SHMT2-219ENST00000555563 A0A1W2PPW3 197 aa11.78□□□□□ -0.52
SHMT2-219ENST00000555563 OR6C68A6NDL8 312 aa11.78□□□□□ -0.52
SHMT2-219ENST00000555563 ARRDC5A6NEK1 342 aa11.78□□□□□ -0.52
SHMT2-219ENST00000555563 FAM171A2A8MVW0 826 aa11.78□□□□□ -0.52
SHMT2-219ENST00000555563 SYNGR3O43761 229 aa11.78□□□□□ -0.52
SHMT2-219ENST00000555563 IDH3BO43837 385 aa11.78□□□□□ -0.52
SHMT2-219ENST00000555563 FKBP6O75344 327 aa11.78□□□□□ -0.52
SHMT2-219ENST00000555563 LY6G6DO95868 133 aa11.78□□□□□ -0.52
SHMT2-219ENST00000555563 LCKP06239 509 aa11.78□□□□□ -0.52
SHMT2-219ENST00000555563 HEXAP06865 529 aa11.78□□□□□ -0.52
SHMT2-219ENST00000555563 ADRA2AP08913 450 aa11.78□□□□□ -0.52
SHMT2-219ENST00000555563 CSF3P09919 207 aa11.78□□□□□ -0.52
SHMT2-219ENST00000555563 HOXB6P17509 224 aaKnown RBP11.78□□□□□ -0.52
SHMT2-219ENST00000555563 GSTM3P21266 225 aa11.78□□□□□ -0.52
SHMT2-219ENST00000555563 CRABP1P29762 137 aa11.78□□□□□ -0.52
SHMT2-219ENST00000555563 ALDH3B1P43353 468 aa11.78□□□□□ -0.52
SHMT2-219ENST00000555563 CENPAP49450 140 aa11.78□□□□□ -0.52
SHMT2-219ENST00000555563 UCP2P55851 309 aa11.78□□□□□ -0.52
SHMT2-219ENST00000555563 DSCR9P59020 149 aa11.78□□□□□ -0.52
SHMT2-219ENST00000555563 LSM6P62312 80 aaKnown RBP11.78□□□□□ -0.52
SHMT2-219ENST00000555563 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.78□□□□□ -0.52
SHMT2-219ENST00000555563 MEP1BQ16820 701 aa11.78□□□□□ -0.52
SHMT2-219ENST00000555563 RFPL4BQ6ZWI9 263 aa11.78□□□□□ -0.52
SHMT2-219ENST00000555563 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.78□□□□□ -0.52
SHMT2-219ENST00000555563 TMEM179BQ7Z7N9 219 aa11.78□□□□□ -0.52
SHMT2-219ENST00000555563 ALDH16A1Q8IZ83 802 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms