RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 ZNF77Q15935 545 aa12.77□□□□□ -0.37
VTI1B-204ENST00000554659 TMEM71Q6P5X7 295 aa12.77□□□□□ -0.37
VTI1B-204ENST00000554659 USP51Q70EK9 711 aa12.77□□□□□ -0.37
VTI1B-204ENST00000554659 RTN4RL1Q86UN2 441 aaPredicted RBP12.77□□□□□ -0.37
VTI1B-204ENST00000554659 VN1R2Q8NFZ6 395 aa12.77□□□□□ -0.37
VTI1B-204ENST00000554659 OR1S2Q8NGQ3 325 aa12.77□□□□□ -0.37
VTI1B-204ENST00000554659 SMIM19Q96E16 107 aa12.77□□□□□ -0.37
VTI1B-204ENST00000554659 SRRQ9GZT4 340 aa12.77□□□□□ -0.37
VTI1B-204ENST00000554659 HIPK2Q9H2X6 1198 aa12.77□□□□□ -0.37
VTI1B-204ENST00000554659 PLK3Q9H4B4 646 aa12.77□□□□□ -0.37
VTI1B-204ENST00000554659 SPHK1Q9NYA1 384 aa12.77□□□□□ -0.37
VTI1B-204ENST00000554659 DHCR7Q9UBM7 475 aaKnown RBP12.77□□□□□ -0.37
VTI1B-204ENST00000554659 B3GALT5Q9Y2C3 310 aa12.77□□□□□ -0.37
VTI1B-204ENST00000554659 XRCC3O43542 346 aa12.77□□□□□ -0.37
VTI1B-204ENST00000554659 TMEM127O75204 238 aa12.77□□□□□ -0.37
VTI1B-204ENST00000554659 CTF1Q16619 201 aa12.77□□□□□ -0.37
VTI1B-204ENST00000554659 HIST2H3AQ71DI3 136 aa12.77□□□□□ -0.37
VTI1B-204ENST00000554659 C1orf87Q8N0U7 546 aa12.77□□□□□ -0.37
VTI1B-204ENST00000554659 GABRG1Q8N1C3 465 aa12.77□□□□□ -0.37
VTI1B-204ENST00000554659 AGBL5Q8NDL9 886 aa12.77□□□□□ -0.37
VTI1B-204ENST00000554659 TMEM30AQ9NV96 361 aa12.77□□□□□ -0.37
VTI1B-204ENST00000554659 NOSIPQ9Y314 301 aaKnown RBP12.77□□□□□ -0.37
VTI1B-204ENST00000554659 F6UZH7 168 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 ENPP1P22413 925 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 AADACP22760 399 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 GZMKP49863 264 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 TOR2AQ5JU69 321 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 IL34Q6ZMJ4 242 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 OR6K3Q8NGY3 331 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 SLC25A43Q8WUT9 341 aaPredicted RBP12.76□□□□□ -0.37
VTI1B-204ENST00000554659 CSF3RQ99062 836 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 MRPL22Q9NWU5 206 aaKnown RBP12.76□□□□□ -0.37
VTI1B-204ENST00000554659 TAS2R5Q9NYW4 299 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 TAS2R4Q9NYW5 299 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 FBXL4Q9UKA2 621 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 A0A1B0GUH1 482 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 LOC107986453A0A1B0GWG9 222 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 OR5K3A6NET4 321 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 SNRPGP15A8MWD9 76 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 H3BQ06 376 aaPredicted RBP12.76□□□□□ -0.37
VTI1B-204ENST00000554659 CCSO14618 274 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 TRAF3IP2O43734 574 aaPredicted RBP12.76□□□□□ -0.37
VTI1B-204ENST00000554659 RGS11O94810 467 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 EIF4EP06730 217 aaKnown RBP12.76□□□□□ -0.37
VTI1B-204ENST00000554659 EDN3P14138 238 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 ACKR3P25106 362 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 HOXD11P31277 338 aaPredicted RBP12.76□□□□□ -0.37
VTI1B-204ENST00000554659 APOBEC1P41238 236 aaKnown RBP12.76□□□□□ -0.37
VTI1B-204ENST00000554659 MRPL58Q14197 206 aaKnown RBP12.76□□□□□ -0.37
VTI1B-204ENST00000554659 PYCR3Q53H96 274 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 YOD1Q5VVQ6 348 aaPredicted RBP12.76□□□□□ -0.37
VTI1B-204ENST00000554659 KANSL1Q7Z3B3 1105 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 ST8SIA2Q92186 375 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 INTS12Q96CB8 462 aaKnown RBP12.76□□□□□ -0.37
VTI1B-204ENST00000554659 FGF21Q9NSA1 209 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 NTNG1Q9Y2I2 539 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 FITM1A5D6W6 292 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 ADRB1P08588 477 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 FKBP2P26885 142 aaKnown RBP12.76□□□□□ -0.37
VTI1B-204ENST00000554659 BSGP35613 385 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 ZNF425Q6IV72 752 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 ACOT7LQ6ZUV0 252 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 GCNT2Q8N0V5 402 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 ST8SIA4Q92187 359 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 MOB1AQ9H8S9 216 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 MBNL1Q9NR56 388 aaKnown RBP12.76□□□□□ -0.37
VTI1B-204ENST00000554659 GPR160Q9UJ42 338 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 MYO5AQ9Y4I1 1855 aaKnown RBP12.76□□□□□ -0.37
VTI1B-204ENST00000554659 TUBAL3A6NHL2 446 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 PPP5D1E7EU14 171 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 ANGPTL7O43827 346 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 B3GALNT1O75752 331 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 TSPAN12O95859 305 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 PRR35P0CG20 571 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 ELAVL1Q15717 326 aaKnown RBP12.76□□□□□ -0.37
VTI1B-204ENST00000554659 DPPA2Q7Z7J5 298 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 OR1J2Q8NGS2 313 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 PIGTQ969N2 578 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 ZNF629Q9UEG4 869 aaPredicted RBP12.76□□□□□ -0.37
VTI1B-204ENST00000554659 PIGLQ9Y2B2 252 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 NUMBLQ9Y6R0 609 aa12.76□□□□□ -0.37
VTI1B-204ENST00000554659 PRAMEF25A6NGN4 478 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 IFITM5A6NNB3 132 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 SIGLEC6O43699 453 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 CER1O95813 267 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 P2RX3P56373 397 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 EGR3Q06889 387 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 SNTB1Q13884 538 aaKnown RBP12.75□□□□□ -0.37
VTI1B-204ENST00000554659 CDK5R1Q15078 307 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 PHLDA2Q53GA4 152 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 CALHM3Q86XJ0 350 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 KIRREL1Q96J84 757 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 KCNIP2Q9NS61 270 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 ZNF814B7Z6K7 855 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 H3BNC9 293 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 RAD52P43351 418 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 ZNF239Q16600 458 aaKnown RBP12.75□□□□□ -0.37
VTI1B-204ENST00000554659 OR51A4Q8NGJ6 313 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 OR2G3Q8NGZ4 309 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 ASB13Q8WXK3 278 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms