RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 TAS2R1Q9NYW7 299 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 EIF3KQ9UBQ5 218 aaKnown RBP9.18□□□□□ -0.94
SHMT2-213ENST00000554600 REV1Q9UBZ9 1251 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 POLR1DQ9Y2S0 133 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 TIMM10BQ9Y5J6 103 aa9.18□□□□□ -0.94
SHMT2-213ENST00000554600 TCRBV5S2A0A599 114 aa9.17□□□□□ -0.94
SHMT2-213ENST00000554600 GYG2O15488 501 aa9.17□□□□□ -0.94
SHMT2-213ENST00000554600 SNAP29O95721 258 aa9.17□□□□□ -0.94
SHMT2-213ENST00000554600 RENP00797 406 aa9.17□□□□□ -0.94
SHMT2-213ENST00000554600 DAOP14920 347 aa9.17□□□□□ -0.94
SHMT2-213ENST00000554600 HOXB4P17483 251 aaPredicted RBP9.17□□□□□ -0.94
SHMT2-213ENST00000554600 FPR3P25089 353 aa9.17□□□□□ -0.94
SHMT2-213ENST00000554600 UCP2P55851 309 aa9.17□□□□□ -0.94
SHMT2-213ENST00000554600 KLF3P57682 345 aaPredicted RBP9.17□□□□□ -0.94
SHMT2-213ENST00000554600 FXYD6P3P58550 94 aa9.17□□□□□ -0.94
SHMT2-213ENST00000554600 ERVS71-1P61550 626 aa9.17□□□□□ -0.94
SHMT2-213ENST00000554600 RFX4Q33E94 735 aa9.17□□□□□ -0.94
SHMT2-213ENST00000554600 ALKBH6Q3KRA9 238 aa9.17□□□□□ -0.94
SHMT2-213ENST00000554600 OTPQ5XKR4 325 aa9.17□□□□□ -0.94
SHMT2-213ENST00000554600 ZNF774Q6NX45 483 aa9.17□□□□□ -0.94
SHMT2-213ENST00000554600 LEG1Q6P5S2 330 aa9.17□□□□□ -0.94
SHMT2-213ENST00000554600 DNM1P34Q6PK57 102 aa9.17□□□□□ -0.94
SHMT2-213ENST00000554600 UGT2A3Q6UWM9 527 aa9.17□□□□□ -0.94
SHMT2-213ENST00000554600 PTCHD4Q6ZW05 846 aa9.17□□□□□ -0.94
SHMT2-213ENST00000554600 CPEB3Q8NE35 698 aaKnown RBP9.17□□□□□ -0.94
SHMT2-213ENST00000554600 OR9Q2Q8NGE9 314 aa9.17□□□□□ -0.94
SHMT2-213ENST00000554600 OR52L1Q8NGH7 329 aa9.17□□□□□ -0.94
SHMT2-213ENST00000554600 OR1J1Q8NGS3 322 aa9.17□□□□□ -0.94
SHMT2-213ENST00000554600 OR4K13Q8NH42 304 aa9.17□□□□□ -0.94
SHMT2-213ENST00000554600 SYNPRQ8TBG9 265 aa9.17□□□□□ -0.94
SHMT2-213ENST00000554600 SNX33Q8WV41 574 aa9.17□□□□□ -0.94
SHMT2-213ENST00000554600 NEU4Q8WWR8 484 aaPredicted RBP9.17□□□□□ -0.94
SHMT2-213ENST00000554600 GPX7Q96SL4 187 aaPredicted RBP9.17□□□□□ -0.94
SHMT2-213ENST00000554600 BCL2L14Q9BZR8 327 aa9.17□□□□□ -0.94
SHMT2-213ENST00000554600 WNT5BQ9H1J7 359 aa9.17□□□□□ -0.94
SHMT2-213ENST00000554600 MS4A5Q9H3V2 200 aa9.17□□□□□ -0.94
SHMT2-213ENST00000554600 REEP1Q9H902 201 aa9.17□□□□□ -0.94
SHMT2-213ENST00000554600 MYOZ1Q9NP98 299 aaPredicted RBP9.17□□□□□ -0.94
SHMT2-213ENST00000554600 YAE1D1Q9NRH1 226 aa9.17□□□□□ -0.94
SHMT2-213ENST00000554600 TAAR3PQ9P1P4 343 aa9.17□□□□□ -0.94
SHMT2-213ENST00000554600 MYEF2Q9P2K5 600 aaKnown RBP9.17□□□□□ -0.94
SHMT2-213ENST00000554600 COA3Q9Y2R0 106 aaPredicted RBP9.17□□□□□ -0.94
SHMT2-213ENST00000554600 LYVE1Q9Y5Y7 322 aa9.17□□□□□ -0.94
SHMT2-213ENST00000554600 DOCK11Q5JSL3 2073 aa9.17□□□□□ -0.94
SHMT2-213ENST00000554600 TANC2Q9HCD6 1990 aa9.16□□□□□ -0.94
SHMT2-213ENST00000554600 LOC390937A0A1W2PQ73 354 aa9.16□□□□□ -0.94
SHMT2-213ENST00000554600 INAFM1C9JVW0 142 aa9.16□□□□□ -0.94
SHMT2-213ENST00000554600 NDUFS8O00217 210 aa9.16□□□□□ -0.94
SHMT2-213ENST00000554600 IMPA2O14732 288 aa9.16□□□□□ -0.94
SHMT2-213ENST00000554600 DOK2O60496 412 aa9.16□□□□□ -0.94
SHMT2-213ENST00000554600 CCNB2O95067 398 aa9.16□□□□□ -0.94
SHMT2-213ENST00000554600 CLPTM1O96005 669 aa9.16□□□□□ -0.94
SHMT2-213ENST00000554600 NAT2P11245 290 aa9.16□□□□□ -0.94
SHMT2-213ENST00000554600 CRABP1P29762 137 aa9.16□□□□□ -0.94
SHMT2-213ENST00000554600 GCH1P30793 250 aa9.16□□□□□ -0.94
SHMT2-213ENST00000554600 CDKN2AP42771 156 aaKnown RBP9.16□□□□□ -0.94
SHMT2-213ENST00000554600 GSSP48637 474 aa9.16□□□□□ -0.94
SHMT2-213ENST00000554600 EVX1P49640 407 aa9.16□□□□□ -0.94
SHMT2-213ENST00000554600 GLO1Q04760 184 aa9.16□□□□□ -0.94
SHMT2-213ENST00000554600 SCRN3Q0VDG4 424 aa9.16□□□□□ -0.94
SHMT2-213ENST00000554600 TSPAN31Q12999 210 aa9.16□□□□□ -0.94
SHMT2-213ENST00000554600 ENDOGQ14249 297 aaKnown RBP9.16□□□□□ -0.94
SHMT2-213ENST00000554600 DNAL1Q4LDG9 190 aa9.16□□□□□ -0.94
SHMT2-213ENST00000554600 CLEC12AQ5QGZ9 265 aa9.16□□□□□ -0.94
SHMT2-213ENST00000554600 SPATA46Q5T0L3 261 aa9.16□□□□□ -0.94
SHMT2-213ENST00000554600 SLC35F1Q5T1Q4 408 aa9.16□□□□□ -0.94
SHMT2-213ENST00000554600 OR2T5Q6IEZ7 315 aa9.16□□□□□ -0.94
SHMT2-213ENST00000554600 C1orf94Q6P1W5 598 aa9.16□□□□□ -0.94
SHMT2-213ENST00000554600 PGBD2Q6P3X8 592 aa9.16□□□□□ -0.94
SHMT2-213ENST00000554600 UNQ6126/PRO20091Q6UXV3 157 aa9.16□□□□□ -0.94
SHMT2-213ENST00000554600 FOXL2NBQ6ZUU3 175 aa9.16□□□□□ -0.94
SHMT2-213ENST00000554600 GLB1L2Q8IW92 636 aa9.16□□□□□ -0.94
SHMT2-213ENST00000554600 LINC00471Q8N535 108 aa9.16□□□□□ -0.94
SHMT2-213ENST00000554600 OR2T29Q8NH02 315 aa9.16□□□□□ -0.94
SHMT2-213ENST00000554600 ABHD4Q8TB40 342 aa9.16□□□□□ -0.94
SHMT2-213ENST00000554600 UBASH3BQ8TF42 649 aa9.16□□□□□ -0.94
SHMT2-213ENST00000554600 ASB9Q96DX5 294 aa9.16□□□□□ -0.94
SHMT2-213ENST00000554600 TSSK2Q96PF2 358 aa9.16□□□□□ -0.94
SHMT2-213ENST00000554600 NUAK2Q9H093 628 aa9.16□□□□□ -0.94
SHMT2-213ENST00000554600 C1orf21Q9H246 121 aa9.16□□□□□ -0.94
SHMT2-213ENST00000554600 MAGIXQ9H6Y5 334 aa9.16□□□□□ -0.94
SHMT2-213ENST00000554600 SRA1Q9HD15 236 aaKnown RBP9.16□□□□□ -0.94
SHMT2-213ENST00000554600 PLEK2Q9NYT0 353 aa9.16□□□□□ -0.94
SHMT2-213ENST00000554600 VSX1Q9NZR4 365 aaPredicted RBP9.16□□□□□ -0.94
SHMT2-213ENST00000554600 GPR160Q9UJ42 338 aa9.16□□□□□ -0.94
SHMT2-213ENST00000554600 SAMHD1Q9Y3Z3 626 aaKnown RBP9.16□□□□□ -0.94
SHMT2-213ENST00000554600 U3KQV3 271 aa9.16□□□□□ -0.94
SHMT2-213ENST00000554600 LOC100509620A0A075B734 347 aa9.15□□□□□ -0.94
SHMT2-213ENST00000554600 LYNX1G3V0Z9 82 aa9.15□□□□□ -0.94
SHMT2-213ENST00000554600 GNGT2O14610 69 aa9.15□□□□□ -0.94
SHMT2-213ENST00000554600 TPD52L2O43399 206 aaKnown RBP9.15□□□□□ -0.94
SHMT2-213ENST00000554600 SGCEO43556 437 aa9.15□□□□□ -0.94
SHMT2-213ENST00000554600 MPZL1O95297 269 aa9.15□□□□□ -0.94
SHMT2-213ENST00000554600 GPANK1O95872 356 aa9.15□□□□□ -0.94
SHMT2-213ENST00000554600 TXNDC12O95881 172 aa9.15□□□□□ -0.94
SHMT2-213ENST00000554600 HLA-DQA2P01906 255 aa9.15□□□□□ -0.94
SHMT2-213ENST00000554600 SCG5P05408 212 aa9.15□□□□□ -0.94
SHMT2-213ENST00000554600 LYNX1P0DP58 116 aa9.15□□□□□ -0.94
SHMT2-213ENST00000554600 RAP2AP10114 183 aa9.15□□□□□ -0.94
SHMT2-213ENST00000554600 APEHP13798 732 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms