RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 RDH12Q96NR8 316 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 OXGR1Q96P68 337 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 GPX7Q96SL4 187 aaPredicted RBP5.56□□□□□ -1.52
SCFD1-212ENST00000554486 TSSK6Q9BXA6 273 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 VCX3BQ9H321 246 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 RIBC2Q9H4K1 309 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 SLC25A19Q9HC21 320 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 OBP2BQ9NPH6 170 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 FANCFQ9NPI8 374 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 TIGARQ9NQ88 270 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 FAM118AQ9NWS6 357 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 PAQR5Q9NXK6 330 aaPredicted RBP5.56□□□□□ -1.52
SCFD1-212ENST00000554486 SMPD3Q9NY59 655 aaPredicted RBP5.56□□□□□ -1.52
SCFD1-212ENST00000554486 KLHL13Q9P2N7 655 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 CLCF1Q9UBD9 225 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 LPAR3Q9UBY5 353 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 RASD1Q9Y272 281 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 ADAM18Q9Y3Q7 739 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 ZNF175Q9Y473 711 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 DIDO1Q9BTC0 2240 aaKnown RBP5.56□□□□□ -1.52
SCFD1-212ENST00000554486 IGKV3D-15A0A087WSY6 115 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 NPIPB13A6NJU9 1138 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 CD8B2A6NJW9 211 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 SLC22A20A6NK97 555 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 ZNF716A6NP11 495 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 NPIPB4C9JG80 1138 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 H3BN98 237 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 BHLHE40O14503 412 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 RNF13O43567 381 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 SLC19A2O60779 497 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 WDR1O75083 606 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 C1QL1O75973 258 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 OR6A2O95222 327 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 PPP1R3DO95685 299 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 IGHMP01871 453 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 PRB1P04280 392 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 CD14P08571 375 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 GABRA1P14867 456 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 ABOP16442 354 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 CDH2P19022 906 aaPredicted RBP5.55□□□□□ -1.52
SCFD1-212ENST00000554486 SLC6A6P31641 620 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 RPL4P36578 427 aaKnown RBP5.55□□□□□ -1.52
SCFD1-212ENST00000554486 ERVK-25P63136 954 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 ADARB1P78563 741 aaKnown RBP5.55□□□□□ -1.52
SCFD1-212ENST00000554486 RASGEF1BQ0VAM2 473 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 GINS1Q14691 196 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 PTGES3Q15185 160 aaKnown RBP5.55□□□□□ -1.52
SCFD1-212ENST00000554486 SOWAHCQ53LP3 525 aaPredicted RBP5.55□□□□□ -1.52
SCFD1-212ENST00000554486 ALG10Q5BKT4 473 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 CLEC12AQ5QGZ9 265 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 ARMC4Q5T2S8 1044 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 SLX4IPQ5VYV7 408 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 NSUN5P2Q63ZY6 315 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 C12orf73Q69YU5 71 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 TMEM225Q6GV28 225 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 RPL13AP3Q6NVV1 102 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 IZUMO2Q6UXV1 221 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 C3P1Q6ZMU1 363 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 DPY19L2P2Q6ZN68 376 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 CREB3L2Q70SY1 520 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 CHMP1BQ7LBR1 199 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 PXKQ7Z7A4 578 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 CCDC71Q8IV32 467 aaPredicted RBP5.55□□□□□ -1.52
SCFD1-212ENST00000554486 SLC43A2Q8N370 569 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 RPRMLQ8N4K4 120 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 DHRSXQ8N5I4 330 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 ZIC4Q8N9L1 334 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 C9orf106Q8NAJ2 232 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 OR52L1Q8NGH7 329 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 ZNF519Q8TB69 540 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 TEX47Q8TBZ9 253 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 CYGBQ8WWM9 190 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 TXNDC15Q96J42 360 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 Q96M85 177 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 ZNF570Q96NI8 536 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 PITX2Q99697 317 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 KATNB1Q9BVA0 655 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 IFT27Q9BW83 186 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 SF3B5Q9BWJ5 86 aaKnown RBP5.55□□□□□ -1.52
SCFD1-212ENST00000554486 VCXQ9H320 206 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 TXNIPQ9H3M7 391 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 RNF122Q9H9V4 155 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 CALHM2Q9HA72 323 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 NRIP3Q9NQ35 241 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 INIPQ9NRY2 104 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 TINAGQ9UJW2 476 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 MCTS1Q9ULC4 181 aaKnown RBP5.55□□□□□ -1.52
SCFD1-212ENST00000554486 FAM215AQ9Y5M1 114 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 ORC6Q9Y5N6 252 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 IER3IP1Q9Y5U9 82 aa5.55□□□□□ -1.52
SCFD1-212ENST00000554486 ZNF462Q96JM2 2506 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 NCOA6Q14686 2063 aaPredicted RBP5.54□□□□□ -1.52
SCFD1-212ENST00000554486 TEX13CA0A0J9YWL9 993 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 LOC100130705A0A1B0GUX0 176 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 A0A1W2PRG6 482 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 MBD3L5A6NJ08 208 aaPredicted RBP5.54□□□□□ -1.52
SCFD1-212ENST00000554486 H0YAE9 185 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 M0R129 80 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 AP4M1O00189 453 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 IMPA2O14732 288 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms