RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 CCDC180Q9P1Z9 1646 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 KCNE1BA0A087WTH5 132 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 ZNF729A6NN14 1252 aaPredicted RBP3.04□□□□□ -1.92
TDP1-207ENST00000553617 F5H6K3 240 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 H7C423 109 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 SLC9A3R1O14745 358 aaPredicted RBP3.04□□□□□ -1.92
TDP1-207ENST00000553617 ZBTB5O15062 677 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 RAMP3O60896 148 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 SRP72O76094 671 aaKnown RBP3.04□□□□□ -1.92
TDP1-207ENST00000553617 VENTXO95231 258 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 LDOC1O95751 146 aaPredicted RBP3.04□□□□□ -1.92
TDP1-207ENST00000553617 ACTL6AO96019 429 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 DCNP07585 359 aaKnown RBP3.04□□□□□ -1.92
TDP1-207ENST00000553617 TFPTP0C1Z6 253 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 DPEP1P16444 411 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 NPR2P20594 1047 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 ZP3P21754 424 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 COILP38432 576 aaPredicted RBP3.04□□□□□ -1.92
TDP1-207ENST00000553617 GYG1P46976 350 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 RFX3P48380 749 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 ERVPABLB-1P60509 514 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 RAB10P61026 200 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 UBE2KP61086 200 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 KCNJ2P63252 427 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 OGDHQ02218 1023 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 CKAP4Q07065 602 aaKnown RBP3.04□□□□□ -1.92
TDP1-207ENST00000553617 KLRC3Q07444 240 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 PDIA2Q13087 525 aaKnown RBP3.04□□□□□ -1.92
TDP1-207ENST00000553617 OR4D1Q15615 310 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 CNPY1Q3B7I2 92 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 SAMD4BQ5PRF9 694 aaKnown RBP3.04□□□□□ -1.92
TDP1-207ENST00000553617 OTUD3Q5T2D3 398 aaPredicted RBP3.04□□□□□ -1.92
TDP1-207ENST00000553617 LEMD1Q68G75 181 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 UFSP1Q6NVU6 142 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 FAAP20Q6NZ36 180 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 CD300LGQ6UXG3 332 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 TMPRSS11AQ6ZMR5 421 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 ABHD13Q7L211 337 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 DPPA2Q7Z7J5 298 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 LHFPL3Q86UP9 236 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 SLC22A18ASQ8N1D0 253 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 Q8N402 240 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 B3GNT7Q8NFL0 401 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 OR2AP1Q8NGE2 309 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 OR6T1Q8NGN1 323 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 OR4A4PQ8NGN8 299 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 OR52E5Q8NH55 327 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 OR10J5Q8NHC4 309 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 LGALS14Q8TCE9 139 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 ACTRT1Q8TDG2 376 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 ITLN1Q8WWA0 313 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 MAFIPQ8WZ33 124 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 MYDGFQ969H8 173 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 CMTM5Q96DZ9 223 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 C18orf12Q96KH6 178 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 ZFP3Q96NJ6 502 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 OLFM3Q96PB7 478 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 TEAD3Q99594 435 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 RBBP8Q99708 897 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 MAPKAP1Q9BPZ7 522 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 SLC35A5Q9BS91 424 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 COPS4Q9BT78 406 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 RSG1Q9BU20 258 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 ASB7Q9H672 318 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 HEXA-AS1Q9H8Q6 139 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 GNB4Q9HAV0 340 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 HRASLSQ9HDD0 168 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 ZC4H2Q9NQZ6 224 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 PLEKHJ1Q9NW61 149 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 IMPAD1Q9NX62 359 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 THUMPD1Q9NXG2 353 aaKnown RBP3.04□□□□□ -1.92
TDP1-207ENST00000553617 MDFICQ9P1T7 246 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 PRODH2Q9UF12 536 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 OPN4Q9UHM6 478 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 KIF25Q9UIL4 384 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 MMP24Q9Y5R2 645 aa3.04□□□□□ -1.92
TDP1-207ENST00000553617 MYO15BQ96JP2 1530 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 RAI1Q7Z5J4 1906 aaPredicted RBP3.03□□□□□ -1.92
TDP1-207ENST00000553617 PTPRGP23470 1445 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 CNTNAP2Q9UHC6 1331 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 LOC100131303A0A0U1RQF7 123 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 A0A1B0GTI1 187 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 SLC5A10A0PJK1 596 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 NDUFAF8A1L188 74 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 CENPXA8MT69 81 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 G3V3Y1 287 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 K7ENP7 123 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 M0R036 132 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 M0R3G1 203 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 CTNSO60931 367 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 HSBP1O75506 76 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 FCN3O75636 299 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 SC5DO75845 299 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 RCBTB2O95199 551 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 FARS2O95363 451 aaKnown RBP3.03□□□□□ -1.92
TDP1-207ENST00000553617 TNFAIP8O95379 198 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 CLDN9O95484 217 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 SLC2A10O95528 541 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 IGKV3-20P01619 116 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 GAPDHP04406 335 aaKnown RBP3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms