RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 NELFAQ9H3P2 528 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 CXorf56Q9H5V9 222 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 MRM2Q9UI43 246 aaKnown RBP12.11□□□□□ -0.47
APEX1-205ENST00000553555 MBD3L4A6NDZ8 208 aaPredicted RBP12.11□□□□□ -0.47
APEX1-205ENST00000553555 MBD3L3A6NE82 208 aaPredicted RBP12.11□□□□□ -0.47
APEX1-205ENST00000553555 MBD3L5A6NJ08 208 aaPredicted RBP12.11□□□□□ -0.47
APEX1-205ENST00000553555 METTL15A6NJ78 407 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 E9PI62 339 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 PSMD9O00233 223 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 SULT1C4O75897 302 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 KRT33AO76009 404 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 TACSTD2P09758 323 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 ABOP16442 354 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 NPR2P20594 1047 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 C1orf185Q5T7R7 199 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 CORO6Q6QEF8 472 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 GFRALQ6UXV0 394 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 SEM1Q6ZVN7 128 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 FAM214BQ7L5A3 538 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 DCXRQ7Z4W1 244 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 ATCAYQ86WG3 371 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 PHC2Q8IXK0 858 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 MBD3L2Q8NHZ7 208 aaPredicted RBP12.11□□□□□ -0.47
APEX1-205ENST00000553555 ZNF420Q8TAQ5 688 aaPredicted RBP12.11□□□□□ -0.47
APEX1-205ENST00000553555 ST7LQ8TDW4 575 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 PELI1Q96FA3 418 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 OR8B4Q96RC9 309 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 TTYH2Q9BSA4 534 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 C12orf49Q9H741 205 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 SIAEQ9HAT2 523 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 SLCO1C1Q9NYB5 712 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 GNG8Q9UK08 70 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 FAM215AQ9Y5M1 114 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 LHFPL6Q9Y693 200 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 FIGNL2A6NMB9 653 aa12.1□□□□□ -0.47
APEX1-205ENST00000553555 ERVH48-1M5A8F1 160 aa12.1□□□□□ -0.47
APEX1-205ENST00000553555 ABHD16AO95870 558 aa12.1□□□□□ -0.47
APEX1-205ENST00000553555 KRT8P05787 483 aa12.1□□□□□ -0.47
APEX1-205ENST00000553555 OR8G3PP0DMU2 310 aa12.1□□□□□ -0.47
APEX1-205ENST00000553555 OR3A2P47893 321 aa12.1□□□□□ -0.47
APEX1-205ENST00000553555 GBX2P52951 348 aaPredicted RBP12.1□□□□□ -0.47
APEX1-205ENST00000553555 TMBIM6P55061 237 aa12.1□□□□□ -0.47
APEX1-205ENST00000553555 ROM1Q03395 351 aa12.1□□□□□ -0.47
APEX1-205ENST00000553555 LY6DQ14210 128 aa12.1□□□□□ -0.47
APEX1-205ENST00000553555 ENDOGQ14249 297 aaKnown RBP12.1□□□□□ -0.47
APEX1-205ENST00000553555 FAM27BQ5VT28 67 aa12.1□□□□□ -0.47
APEX1-205ENST00000553555 LIPKQ5VXJ0 399 aa12.1□□□□□ -0.47
APEX1-205ENST00000553555 KCTD18Q6PI47 426 aaPredicted RBP12.1□□□□□ -0.47
APEX1-205ENST00000553555 SLC16A12Q6ZSM3 486 aa12.1□□□□□ -0.47
APEX1-205ENST00000553555 GCNT2Q8N0V5 402 aa12.1□□□□□ -0.47
APEX1-205ENST00000553555 YIPF7Q8N8F6 280 aa12.1□□□□□ -0.47
APEX1-205ENST00000553555 ZFP41Q8N8Y5 198 aa12.1□□□□□ -0.47
APEX1-205ENST00000553555 OR52N5Q8NH56 324 aa12.1□□□□□ -0.47
APEX1-205ENST00000553555 UFD1Q92890 307 aa12.1□□□□□ -0.47
APEX1-205ENST00000553555 ISOC1Q96CN7 298 aa12.1□□□□□ -0.47
APEX1-205ENST00000553555 FOXB1Q99853 325 aa12.1□□□□□ -0.47
APEX1-205ENST00000553555 ZNF416Q9BWM5 594 aa12.1□□□□□ -0.47
APEX1-205ENST00000553555 TRIM36Q9NQ86 728 aa12.1□□□□□ -0.47
APEX1-205ENST00000553555 TMEM38BQ9NVV0 291 aa12.1□□□□□ -0.47
APEX1-205ENST00000553555 UPB1Q9UBR1 384 aa12.1□□□□□ -0.47
APEX1-205ENST00000553555 RSL24D1Q9UHA3 163 aaKnown RBP12.1□□□□□ -0.47
APEX1-205ENST00000553555 PRSS50Q9UI38 385 aa12.1□□□□□ -0.47
APEX1-205ENST00000553555 ENPP5Q9UJA9 477 aa12.1□□□□□ -0.47
APEX1-205ENST00000553555 IKZF2Q9UKS7 526 aa12.1□□□□□ -0.47
APEX1-205ENST00000553555 ZNF835Q9Y2P0 537 aa12.1□□□□□ -0.47
APEX1-205ENST00000553555 EMC9Q9Y3B6 208 aa12.1□□□□□ -0.47
APEX1-205ENST00000553555 SIRT4Q9Y6E7 314 aaPredicted RBP12.1□□□□□ -0.47
APEX1-205ENST00000553555 ITPR1Q14643 2758 aa12.1□□□□□ -0.47
APEX1-205ENST00000553555 TTLL8A6PVC2 850 aa12.09□□□□□ -0.47
APEX1-205ENST00000553555 ZNF587BE7ETH6 402 aa12.09□□□□□ -0.47
APEX1-205ENST00000553555 ZNF701M0R085 212 aaPredicted RBP12.09□□□□□ -0.47
APEX1-205ENST00000553555 PRRG2O14669 202 aa12.09□□□□□ -0.47
APEX1-205ENST00000553555 KIR2DL2P43627 348 aaPredicted RBP12.09□□□□□ -0.47
APEX1-205ENST00000553555 TAS2R43P59537 309 aa12.09□□□□□ -0.47
APEX1-205ENST00000553555 GPR50Q13585 617 aa12.09□□□□□ -0.47
APEX1-205ENST00000553555 PCSK4Q6UW60 755 aa12.09□□□□□ -0.47
APEX1-205ENST00000553555 P2RY8Q86VZ1 359 aa12.09□□□□□ -0.47
APEX1-205ENST00000553555 ZNF679Q8IYX0 411 aa12.09□□□□□ -0.47
APEX1-205ENST00000553555 OR2AJ1Q8NGZ0 328 aa12.09□□□□□ -0.47
APEX1-205ENST00000553555 MAP6Q96JE9 813 aa12.09□□□□□ -0.47
APEX1-205ENST00000553555 TSC22D3Q99576 134 aa12.09□□□□□ -0.47
APEX1-205ENST00000553555 DOK1Q99704 481 aa12.09□□□□□ -0.47
APEX1-205ENST00000553555 C1orf198Q9H425 327 aa12.09□□□□□ -0.47
APEX1-205ENST00000553555 ELOVL3Q9HB03 270 aa12.09□□□□□ -0.47
APEX1-205ENST00000553555 ACOXLQ9NUZ1 547 aa12.09□□□□□ -0.47
APEX1-205ENST00000553555 NDUFB11Q9NX14 153 aa12.09□□□□□ -0.47
APEX1-205ENST00000553555 ASH2LQ9UBL3 628 aa12.09□□□□□ -0.47
APEX1-205ENST00000553555 GDF2Q9UK05 429 aaPredicted RBP12.09□□□□□ -0.47
APEX1-205ENST00000553555 POLR1DQ9Y2S0 133 aa12.09□□□□□ -0.47
APEX1-205ENST00000553555 SF3B6Q9Y3B4 125 aaKnown RBP12.09□□□□□ -0.47
APEX1-205ENST00000553555 PNMA8CA0A1B0GUJ8 204 aa12.08□□□□□ -0.48
APEX1-205ENST00000553555 HSPB2A8KAH6 182 aa12.08□□□□□ -0.48
APEX1-205ENST00000553555 OGG1O15527 345 aa12.08□□□□□ -0.48
APEX1-205ENST00000553555 TOXO94900 526 aa12.08□□□□□ -0.48
APEX1-205ENST00000553555 CST2P09228 141 aa12.08□□□□□ -0.48
APEX1-205ENST00000553555 EDN3P14138 238 aa12.08□□□□□ -0.48
APEX1-205ENST00000553555 CELP19835 753 aa12.08□□□□□ -0.48
APEX1-205ENST00000553555 NR4A1P22736 598 aa12.08□□□□□ -0.48
APEX1-205ENST00000553555 GADD45AP24522 165 aa12.08□□□□□ -0.48
APEX1-205ENST00000553555 TIMP3P35625 211 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms