RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 TMEM155Q4W5P6 130 aa6.1□□□□□ -1.43
ATXN3-219ENST00000553488 ALG10BQ5I7T1 473 aa6.1□□□□□ -1.43
ATXN3-219ENST00000553488 FAM91A1Q658Y4 838 aa6.1□□□□□ -1.43
ATXN3-219ENST00000553488 C16orf87Q6PH81 154 aa6.1□□□□□ -1.43
ATXN3-219ENST00000553488 RFPL4BQ6ZWI9 263 aa6.1□□□□□ -1.43
ATXN3-219ENST00000553488 MIER2Q8N344 545 aa6.1□□□□□ -1.43
ATXN3-219ENST00000553488 ICA1LQ8NDH6 482 aa6.1□□□□□ -1.43
ATXN3-219ENST00000553488 OR4K5Q8NGD3 323 aa6.1□□□□□ -1.43
ATXN3-219ENST00000553488 OR6X1Q8NH79 312 aa6.1□□□□□ -1.43
ATXN3-219ENST00000553488 DNAJA4Q8WW22 397 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-219ENST00000553488 GEMIN6Q8WXD5 167 aaKnown RBP6.1□□□□□ -1.43
ATXN3-219ENST00000553488 MAL2Q969L2 176 aa6.1□□□□□ -1.43
ATXN3-219ENST00000553488 UPRTQ96BW1 309 aa6.1□□□□□ -1.43
ATXN3-219ENST00000553488 MARS2Q96GW9 593 aaKnown RBP6.1□□□□□ -1.43
ATXN3-219ENST00000553488 SIGLEC11Q96RL6 698 aa6.1□□□□□ -1.43
ATXN3-219ENST00000553488 RHOXF2Q9BQY4 288 aa6.1□□□□□ -1.43
ATXN3-219ENST00000553488 WFDC6Q9BQY6 131 aa6.1□□□□□ -1.43
ATXN3-219ENST00000553488 NUF2Q9BZD4 464 aa6.1□□□□□ -1.43
ATXN3-219ENST00000553488 PRDM13Q9H4Q3 707 aa6.1□□□□□ -1.43
ATXN3-219ENST00000553488 ARMC7Q9H6L4 198 aa6.1□□□□□ -1.43
ATXN3-219ENST00000553488 TPT1P8Q9HAU6 139 aa6.1□□□□□ -1.43
ATXN3-219ENST00000553488 PATZ1Q9HBE1 687 aaKnown RBP6.1□□□□□ -1.43
ATXN3-219ENST00000553488 A4GALTQ9NPC4 353 aa6.1□□□□□ -1.43
ATXN3-219ENST00000553488 RPS6KB2Q9UBS0 482 aa6.1□□□□□ -1.43
ATXN3-219ENST00000553488 TESQ9UGI8 421 aaKnown RBP6.1□□□□□ -1.43
ATXN3-219ENST00000553488 RAP2CQ9Y3L5 183 aa6.1□□□□□ -1.43
ATXN3-219ENST00000553488 IGHV3OR16-10A0A075B7F0 116 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 TRAV40A0A0B4J280 105 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 A0A1B0GUS0 222 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 ZNF726A6NNF4 738 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 M0QZ24 198 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 HOXA3O43365 443 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-219ENST00000553488 SPRY3O43610 288 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 TPST2O60704 377 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 NDUFA7O95182 113 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 GPANK1O95872 356 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 SERPINE1P05121 402 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 DRD4P21917 467 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 CD80P33681 288 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 RPL14P50914 215 aaKnown RBP6.09□□□□□ -1.43
ATXN3-219ENST00000553488 RAG2P55895 527 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 ABCE1P61221 599 aaKnown RBP6.09□□□□□ -1.43
ATXN3-219ENST00000553488 DBPQ10586 325 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-219ENST00000553488 MELKQ14680 651 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 ZMYND11Q15326 602 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 MOGQ16653 247 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 HIST3H3Q16695 136 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 SLC36A2Q495M3 483 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 NRN1LQ496H8 165 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 PDCD4Q53EL6 469 aaKnown RBP6.09□□□□□ -1.43
ATXN3-219ENST00000553488 SPATA46Q5T0L3 261 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 MBNL2Q5VZF2 373 aaKnown RBP6.09□□□□□ -1.43
ATXN3-219ENST00000553488 OLFML2AQ68BL7 652 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 ASPHD2Q6ICH7 369 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 ZNF774Q6NX45 483 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 TMEM53Q6P2H8 277 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 ULK3Q6PHR2 472 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 DHRS4L2Q6PKH6 230 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 SLC35D2Q76EJ3 337 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 SLC16A14Q7RTX9 510 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 DPPA2Q7Z7J5 298 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 SPICQ8N5J4 248 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 KIR3DL3Q8N743 410 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 ZNF283Q8N7M2 679 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 EIF1ADQ8N9N8 165 aaKnown RBP6.09□□□□□ -1.43
ATXN3-219ENST00000553488 RBM15BQ8NDT2 890 aaKnown RBP6.09□□□□□ -1.43
ATXN3-219ENST00000553488 CPEB3Q8NE35 698 aaKnown RBP6.09□□□□□ -1.43
ATXN3-219ENST00000553488 OR1J1Q8NGS3 322 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 OR5J2Q8NH18 312 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 BBS10Q8TAM1 723 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 CHAC2Q8WUX2 184 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 POM121L2Q96KW2 1035 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 SEPHS2Q99611 448 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 EPYCQ99645 322 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 RBM4BQ9BQ04 359 aaKnown RBP6.09□□□□□ -1.43
ATXN3-219ENST00000553488 TMEM43Q9BTV4 400 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 MRI1Q9BV20 369 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 KRTAP4-11Q9BYQ6 195 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 MS4A7Q9GZW8 240 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-219ENST00000553488 TMEM106BQ9NUM4 274 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 THUMPD1Q9NXG2 353 aaKnown RBP6.09□□□□□ -1.43
ATXN3-219ENST00000553488 C1RLQ9NZP8 487 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 KLHL21Q9UJP4 597 aa6.09□□□□□ -1.43
ATXN3-219ENST00000553488 DYNC2H1Q8NCM8 4307 aaKnown RBP6.09□□□□□ -1.43
ATXN3-219ENST00000553488 LOC100509620A0A075B734 347 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 SRRM5B3KS81 715 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 C11orf98E9PRG8 122 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 H3BSA7 217 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 TIMM23O14925 209 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 MGRN1O60291 552 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 TPST1O60507 370 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 ENTPD5O75356 428 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 FARS2O95363 451 aaKnown RBP6.08□□□□□ -1.44
ATXN3-219ENST00000553488 MT-ATP6P00846 226 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 NGFP01138 241 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 ADORA3P0DMS8 318 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 ETS2P15036 469 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 AHCYP23526 432 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 PCGF2P35227 344 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 GNALP38405 381 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms