RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 SPATA46Q5T0L3 261 aa13.59□□□□□ -0.23
CDK4-215ENST00000553237 TMEM154Q6P9G4 183 aa13.59□□□□□ -0.23
CDK4-215ENST00000553237 ZNF101Q8IZC7 436 aa13.59□□□□□ -0.23
CDK4-215ENST00000553237 FNDC8Q8TC99 324 aa13.59□□□□□ -0.23
CDK4-215ENST00000553237 GTF3AQ92664 365 aaKnown RBP13.59□□□□□ -0.23
CDK4-215ENST00000553237 OR2H1Q9GZK4 316 aa13.59□□□□□ -0.23
CDK4-215ENST00000553237 SLCO1C1Q9NYB5 712 aa13.59□□□□□ -0.23
CDK4-215ENST00000553237 EIF3KQ9UBQ5 218 aaKnown RBP13.59□□□□□ -0.23
CDK4-215ENST00000553237 GRHPRQ9UBQ7 328 aa13.59□□□□□ -0.23
CDK4-215ENST00000553237 GPR160Q9UJ42 338 aa13.59□□□□□ -0.23
CDK4-215ENST00000553237 C17orf100A8MU93 164 aa13.58□□□□□ -0.24
CDK4-215ENST00000553237 CDC14BO60729 498 aa13.58□□□□□ -0.24
CDK4-215ENST00000553237 CST2P09228 141 aa13.58□□□□□ -0.24
CDK4-215ENST00000553237 SRD5A1P18405 259 aa13.58□□□□□ -0.24
CDK4-215ENST00000553237 ACHEP22303 614 aa13.58□□□□□ -0.24
CDK4-215ENST00000553237 CCL8P80075 99 aa13.58□□□□□ -0.24
CDK4-215ENST00000553237 ENDOGQ14249 297 aaKnown RBP13.58□□□□□ -0.24
CDK4-215ENST00000553237 CR1LQ2VPA4 569 aa13.58□□□□□ -0.24
CDK4-215ENST00000553237 ZNF774Q6NX45 483 aa13.58□□□□□ -0.24
CDK4-215ENST00000553237 UGT2A3Q6UWM9 527 aa13.58□□□□□ -0.24
CDK4-215ENST00000553237 ALDH16A1Q8IZ83 802 aa13.58□□□□□ -0.24
CDK4-215ENST00000553237 ARHGAP24Q8N264 748 aa13.58□□□□□ -0.24
CDK4-215ENST00000553237 LINC01356Q8N9X3 169 aa13.58□□□□□ -0.24
CDK4-215ENST00000553237 OR52J3Q8NH60 311 aa13.58□□□□□ -0.24
CDK4-215ENST00000553237 SNX33Q8WV41 574 aa13.58□□□□□ -0.24
CDK4-215ENST00000553237 HPS1Q92902 700 aa13.58□□□□□ -0.24
CDK4-215ENST00000553237 ZNF416Q9BWM5 594 aa13.58□□□□□ -0.24
CDK4-215ENST00000553237 ANKRD19PQ9H560 264 aa13.58□□□□□ -0.24
CDK4-215ENST00000553237 EMC7Q9NPA0 242 aa13.58□□□□□ -0.24
CDK4-215ENST00000553237 ZNF275Q9NSD4 429 aaPredicted RBP13.58□□□□□ -0.24
CDK4-215ENST00000553237 TAS2R1Q9NYW7 299 aa13.58□□□□□ -0.24
CDK4-215ENST00000553237 IL20RAQ9UHF4 553 aa13.58□□□□□ -0.24
CDK4-215ENST00000553237 TMEM5Q9Y2B1 443 aa13.58□□□□□ -0.24
CDK4-215ENST00000553237 TIMM10BQ9Y5J6 103 aa13.58□□□□□ -0.24
CDK4-215ENST00000553237 CUBNO60494 3623 aa13.58□□□□□ -0.24
CDK4-215ENST00000553237 TRBV4-1A0A0J9YWV2 114 aa13.57□□□□□ -0.24
CDK4-215ENST00000553237 A0A1W2PRQ8 180 aa13.57□□□□□ -0.24
CDK4-215ENST00000553237 XKRYO14609 159 aa13.57□□□□□ -0.24
CDK4-215ENST00000553237 WNT9BO14905 357 aa13.57□□□□□ -0.24
CDK4-215ENST00000553237 PPIHO43447 177 aaKnown RBP13.57□□□□□ -0.24
CDK4-215ENST00000553237 PTP4A3O75365 173 aa13.57□□□□□ -0.24
CDK4-215ENST00000553237 SEMG1P04279 462 aa13.57□□□□□ -0.24
CDK4-215ENST00000553237 MSR1P21757 451 aa13.57□□□□□ -0.24
CDK4-215ENST00000553237 PCBD1P61457 104 aa13.57□□□□□ -0.24
CDK4-215ENST00000553237 DGCR6Q14129 220 aa13.57□□□□□ -0.24
CDK4-215ENST00000553237 SEC23BQ15437 767 aa13.57□□□□□ -0.24
CDK4-215ENST00000553237 TSTQ16762 297 aaKnown RBP13.57□□□□□ -0.24
CDK4-215ENST00000553237 MESTQ5EB52 335 aa13.57□□□□□ -0.24
CDK4-215ENST00000553237 OTPQ5XKR4 325 aa13.57□□□□□ -0.24
CDK4-215ENST00000553237 CYP2R1Q6VVX0 501 aa13.57□□□□□ -0.24
CDK4-215ENST00000553237 FOXL2NBQ6ZUU3 175 aa13.57□□□□□ -0.24
CDK4-215ENST00000553237 SLC25A40Q8TBP6 338 aa13.57□□□□□ -0.24
CDK4-215ENST00000553237 MCUR1Q96AQ8 359 aa13.57□□□□□ -0.24
CDK4-215ENST00000553237 RASD2Q96D21 266 aa13.57□□□□□ -0.24
CDK4-215ENST00000553237 ZNF570Q96NI8 536 aa13.57□□□□□ -0.24
CDK4-215ENST00000553237 RERGLQ9H628 205 aa13.57□□□□□ -0.24
CDK4-215ENST00000553237 POLE4Q9NR33 117 aa13.57□□□□□ -0.24
CDK4-215ENST00000553237 ACTR3BQ9P1U1 418 aa13.57□□□□□ -0.24
CDK4-215ENST00000553237 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.57□□□□□ -0.241e-8■■■■■ 44.3
CDK4-215ENST00000553237 TEX13CA0A0J9YWL9 993 aa13.56□□□□□ -0.24
CDK4-215ENST00000553237 C12orf71A8MTZ7 269 aa13.56□□□□□ -0.24
CDK4-215ENST00000553237 IMPA2O14732 288 aa13.56□□□□□ -0.24
CDK4-215ENST00000553237 PHF1O43189 567 aaPredicted RBP13.56□□□□□ -0.24
CDK4-215ENST00000553237 TPD52L2O43399 206 aaKnown RBP13.56□□□□□ -0.24
CDK4-215ENST00000553237 UBOX5O94941 541 aa13.56□□□□□ -0.24
CDK4-215ENST00000553237 NDUFB2O95178 105 aa13.56□□□□□ -0.24
CDK4-215ENST00000553237 NGFP01138 241 aa13.56□□□□□ -0.24
CDK4-215ENST00000553237 IGHV3-13P01766 116 aa13.56□□□□□ -0.24
CDK4-215ENST00000553237 ITGA2P17301 1181 aa13.56□□□□□ -0.24
CDK4-215ENST00000553237 HNF1AP20823 631 aa13.56□□□□□ -0.24
CDK4-215ENST00000553237 ATP6V1B2P21281 511 aa13.56□□□□□ -0.24
CDK4-215ENST00000553237 GCH1P30793 250 aa13.56□□□□□ -0.24
CDK4-215ENST00000553237 MPV17P39210 176 aa13.56□□□□□ -0.24
CDK4-215ENST00000553237 OMPP47874 163 aa13.56□□□□□ -0.24
CDK4-215ENST00000553237 LIMS1P48059 325 aa13.56□□□□□ -0.24
CDK4-215ENST00000553237 CDH15P55291 814 aa13.56□□□□□ -0.24
CDK4-215ENST00000553237 TMEM33P57088 247 aa13.56□□□□□ -0.24
CDK4-215ENST00000553237 MOGQ16653 247 aa13.56□□□□□ -0.24
CDK4-215ENST00000553237 ZNF718Q3SXZ3 478 aa13.56□□□□□ -0.24
CDK4-215ENST00000553237 TMEM255AQ5JRV8 349 aa13.56□□□□□ -0.24
CDK4-215ENST00000553237 THSD4Q6ZMP0 1018 aa13.56□□□□□ -0.24
CDK4-215ENST00000553237 RFPL4BQ6ZWI9 263 aa13.56□□□□□ -0.24
CDK4-215ENST00000553237 FAM122BQ7Z309 247 aa13.56□□□□□ -0.24
CDK4-215ENST00000553237 CLDND2Q8NHS1 167 aa13.56□□□□□ -0.24
CDK4-215ENST00000553237 ABHD4Q8TB40 342 aa13.56□□□□□ -0.24
CDK4-215ENST00000553237 MARS2Q96GW9 593 aaKnown RBP13.56□□□□□ -0.24
CDK4-215ENST00000553237 OR2J1Q9GZK6 312 aa13.56□□□□□ -0.24
CDK4-215ENST00000553237 NDEL1Q9GZM8 345 aa13.56□□□□□ -0.24
CDK4-215ENST00000553237 C1orf21Q9H246 121 aa13.56□□□□□ -0.24
CDK4-215ENST00000553237 TREM2Q9NZC2 230 aa13.56□□□□□ -0.24
CDK4-215ENST00000553237 PRPF19Q9UMS4 504 aaKnown RBP13.56□□□□□ -0.24
CDK4-215ENST00000553237 AURKCQ9UQB9 309 aa13.56□□□□□ -0.24
CDK4-215ENST00000553237 SIGLEC7Q9Y286 467 aa13.56□□□□□ -0.24
CDK4-215ENST00000553237 SVEP1Q4LDE5 3571 aa13.55□□□□□ -0.24
CDK4-215ENST00000553237 PRSS37A4D1T9 235 aa13.55□□□□□ -0.24
CDK4-215ENST00000553237 SOCS2O14508 198 aa13.55□□□□□ -0.24
CDK4-215ENST00000553237 SPRY3O43610 288 aa13.55□□□□□ -0.24
CDK4-215ENST00000553237 RP2O75695 350 aa13.55□□□□□ -0.24
CDK4-215ENST00000553237 CTLA4P16410 223 aa13.55□□□□□ -0.24
CDK4-215ENST00000553237 ZNF81P51508 661 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms