RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 FAM45AQ8TCE6 357 aa5.27□□□□□ -1.57
VPS29-210ENST00000552130 MCOLN3Q8TDD5 553 aa5.27□□□□□ -1.57
VPS29-210ENST00000552130 IL1F10Q8WWZ1 152 aa5.27□□□□□ -1.57
VPS29-210ENST00000552130 OR5B12Q96R08 314 aa5.27□□□□□ -1.57
VPS29-210ENST00000552130 FOXC2Q99958 501 aa5.27□□□□□ -1.57
VPS29-210ENST00000552130 DSN1Q9H410 356 aa5.27□□□□□ -1.57
VPS29-210ENST00000552130 TRABDQ9H4I3 376 aa5.27□□□□□ -1.57
VPS29-210ENST00000552130 CAB39LQ9H9S4 337 aa5.27□□□□□ -1.57
VPS29-210ENST00000552130 TMEM27Q9HBJ8 222 aa5.27□□□□□ -1.57
VPS29-210ENST00000552130 CTPS2Q9NRF8 586 aa5.27□□□□□ -1.57
VPS29-210ENST00000552130 INIPQ9NRY2 104 aa5.27□□□□□ -1.57
VPS29-210ENST00000552130 TMEM9Q9P0T7 183 aa5.27□□□□□ -1.57
VPS29-210ENST00000552130 RSPH14Q9UHP6 348 aa5.27□□□□□ -1.57
VPS29-210ENST00000552130 KCNS2Q9ULS6 477 aa5.27□□□□□ -1.57
VPS29-210ENST00000552130 ARL5AQ9Y689 179 aa5.27□□□□□ -1.57
VPS29-210ENST00000552130 C9orf84Q5VXU9 1444 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 KIR2DL5BA0A0G2JN68 375 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 KIR2DL5BA0A0G2JPC4 375 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 ZNF814B7Z6K7 855 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 C21orf140B9A014 251 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 C11orf98E9PRG8 122 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 H7C2Y5 167 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 ACOT8O14734 319 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 ATP6V0E1O15342 81 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 PRKNO60260 465 aaPredicted RBP5.26□□□□□ -1.57
VPS29-210ENST00000552130 CDC40O60508 579 aaKnown RBP eCLIP5.26□□□□□ -1.57
VPS29-210ENST00000552130 C1QL1O75973 258 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 GCGP01275 180 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 IGLV2-14P01704 120 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 FGF1P05230 155 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 LIPCP11150 499 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 GFAPP14136 432 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 UGT2B7P16662 529 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 IGFBP3P17936 291 aaPredicted RBP5.26□□□□□ -1.57
VPS29-210ENST00000552130 CELP19835 753 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 PVALBP20472 110 aaPredicted RBP5.26□□□□□ -1.57
VPS29-210ENST00000552130 FUT3P21217 361 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 GNRHRP30968 328 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 OMPP47874 163 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 STC1P52823 247 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 CLDN12P56749 244 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 STXBP1P61764 594 aaKnown RBP5.26□□□□□ -1.57
VPS29-210ENST00000552130 RANP62826 216 aaKnown RBP5.26□□□□□ -1.57
VPS29-210ENST00000552130 UNC119Q13432 240 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 SPA17Q15506 151 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 MED27Q6P2C8 311 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 RBMS3Q6XE24 437 aaKnown RBP5.26□□□□□ -1.57
VPS29-210ENST00000552130 C1QL2Q7Z5L3 287 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 AMIGO2Q86SJ2 522 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 KIR2DL5AQ8N109 375 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 C9orf106Q8NAJ2 232 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 ZNF740Q8NDX6 193 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 PXT1Q8NFP0 134 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 KIR2DL5BQ8NHK3 375 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 APOBEC4Q8WW27 367 aaKnown RBP5.26□□□□□ -1.57
VPS29-210ENST00000552130 TCTEX1D2Q8WW35 142 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 ANKRD9Q96BM1 317 aaPredicted RBP5.26□□□□□ -1.57
VPS29-210ENST00000552130 TLCD1Q96CP7 247 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 ZNF488Q96MN9 340 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 DUSP26Q9BV47 211 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 HCAR1Q9BXC0 346 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 NMUR1Q9HB89 426 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 XPNPEP1Q9NQW7 623 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 SPANXB1Q9NS25 103 aaPredicted RBP5.26□□□□□ -1.57
VPS29-210ENST00000552130 TAS2R16Q9NYV7 291 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 KCNG2Q9UJ96 466 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 PAIP2BQ9ULR5 123 aaKnown RBP5.26□□□□□ -1.57
VPS29-210ENST00000552130 RPL36Q9Y3U8 105 aaKnown RBP5.26□□□□□ -1.57
VPS29-210ENST00000552130 SELENOKQ9Y6D0 94 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 CEMIPQ8WUJ3 1361 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 KIAA0232Q92628 1395 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 TNRQ92752 1358 aa5.26□□□□□ -1.57
VPS29-210ENST00000552130 A0A1W2PPI3 338 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 LYRM9A8MSI8 78 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 C2orf74A8MZ97 194 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 CXCR6O00574 342 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 PFDN6O15212 129 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 MRPS12O15235 138 aaKnown RBP5.25□□□□□ -1.57
VPS29-210ENST00000552130 BIRC5O15392 142 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 SSNA1O43805 119 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 CTDNEP1O95476 244 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 KRT75O95678 551 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 IFNA16P05015 189 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 LIMS3P0CW19 117 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 LIMS4P0CW20 117 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 UCHL3P15374 230 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 RPL35AP18077 110 aaKnown RBP5.25□□□□□ -1.57
VPS29-210ENST00000552130 SERPINA2P20848 420 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 SERPINB1P30740 379 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 SLCO1A2P46721 670 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 HCCSP53701 268 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 TAS2R31P59538 309 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 SP4Q02446 784 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 ZNF169Q14929 603 aaPredicted RBP5.25□□□□□ -1.57
VPS29-210ENST00000552130 KIR2DS3Q14952 304 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 PON3Q15166 354 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 FAM120AOSQ5T036 256 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 OTUD1Q5VV17 481 aaPredicted RBP5.25□□□□□ -1.57
VPS29-210ENST00000552130 IRAK1BP1Q5VVH5 260 aa5.25□□□□□ -1.57
VPS29-210ENST00000552130 SAXO2Q658L1 398 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms