RNA–Protein interactions for RNA: ENST00000551260.5

RACGAP1-223, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-223	ENST00000551260	CRABP2	P29373	138 aa		4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	SPR	P35270	261 aa	Predicted RBP	4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	HSD17B3	P37058	310 aa		4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	LIPA	P38571	399 aa		4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	PSMB10	P40306	273 aa		4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	PMEL	P40967	661 aa		4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	RPS5	P46782	204 aa	Known RBP	4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	CCT3	P49368	545 aa	Known RBP	4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	ERF	P50548	548 aa		4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	KCNJ10	P78508	379 aa		4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	GUCY1A3	Q02108	690 aa		4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	GUCY2D	Q02846	1103 aa		4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	PSG7	Q13046	419 aa		4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	C1D	Q13901	141 aa	Known RBP	4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	NFYC	Q13952	458 aa		4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	PPP1R7	Q15435	360 aa		4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	FAM83E	Q2M2I3	478 aa		4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	XKR7	Q5GH72	579 aa		4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	MTX3	Q5HYI7	312 aa		4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	KHDC1L	Q5JSQ8	128 aa		4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	CD276	Q5ZPR3	534 aa		4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	ATG16L1	Q676U5	607 aa		4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	TYW3	Q6IPR3	259 aa	Known RBP	4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	WDR88	Q6ZMY6	472 aa		4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	MOGAT3	Q86VF5	341 aa		4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	TMEM139	Q8IV31	216 aa		4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	CTAGE3P	Q8IX95	158 aa		4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	CLEC4F	Q8N1N0	589 aa		4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260		Q8N2B8	174 aa		4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	LILRB2	Q8N423	598 aa		4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	DTX3	Q8N9I9	347 aa		4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	PNLDC1	Q8NA58	520 aa	Known RBP	4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	METTL6	Q8TCB7	284 aa		4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	PNPT1	Q8TCS8	783 aa	Known RBP	4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	DCAKD	Q8WVC6	231 aa		4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	PPCDC	Q96CD2	204 aa		4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	AJUBA	Q96IF1	538 aa		4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	ITCH	Q96J02	903 aa		4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	PTDSS2	Q9BVG9	487 aa		4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	SLC19A3	Q9BZV2	496 aa		4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	MMADHC	Q9H3L0	296 aa	Predicted RBP	4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	ZMAT4	Q9H898	229 aa		4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	TMCC3	Q9ULS5	477 aa		4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	GUCA1B	Q9UMX6	200 aa		4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	SLC35A3	Q9Y2D2	325 aa		4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	CAB39	Q9Y376	341 aa	Predicted RBP	4.74	□□□□□ -1.65
RACGAP1-223	ENST00000551260	LOC100509620	A0A075B734	347 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	FAM159B	A6NKW6	160 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260		A8MVM7	634 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	PRR23D1	E9PI22	279 aa	Predicted RBP	4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	MS4A18	H0YCH9	400 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	HDAC3	O15379	428 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	SLC25A17	O43808	307 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	RAMP3	O60896	148 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	IGF2	P01344	180 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	THY1	P04216	161 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	LIPF	P07098	398 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	TFPT	P0C1Z6	253 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	GKN3P	P0CG01	181 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	PRR23D2	P0DMB1	279 aa	Predicted RBP	4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	NCF2	P19878	526 aa	Predicted RBP	4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	TNFSF4	P23510	183 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	VEGFC	P49767	419 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	ARL4C	P56559	192 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	PPP1CB	P62140	327 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	FUT5	Q11128	374 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	MS4A18	Q3C1V0	323 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	FAM153C	Q494X1	144 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	GRTP1	Q5TC63	336 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	TMEM53	Q6P2H8	277 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	KCTD18	Q6PI47	426 aa	Predicted RBP	4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	DCDC5	Q6ZRR9	648 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	C18orf65	Q6ZTR6	163 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	GPRIN3	Q6ZVF9	776 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	BTN2A1	Q7KYR7	527 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	TMEM219	Q86XT9	240 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	CADM2	Q8N3J6	435 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	BEND2	Q8NDZ0	799 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	OR4K5	Q8NGD3	323 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	OR10AD1	Q8NGE0	317 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	OR1J2	Q8NGS2	313 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	OR6N1	Q8NGY5	312 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	PIFO	Q8TCI5	191 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	GRK7	Q8WTQ7	553 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	TSSK3	Q96PN8	268 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	ZNF382	Q96SR6	550 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	ZNF649	Q9BS31	505 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	MECR	Q9BV79	373 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	ZNF350	Q9GZX5	532 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	IQCG	Q9H095	443 aa	Known RBP	4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	REEP4	Q9H6H4	257 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	A4GALT	Q9NPC4	353 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	EXOSC3	Q9NQT5	275 aa	Known RBP	4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	ONECUT1	Q9UBC0	465 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	IL19	Q9UHD0	177 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	BAIAP2L1	Q9UHR4	511 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	TSSC4	Q9Y5U2	329 aa	Predicted RBP	4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	SMAD5-AS1	Q9Y6J3	95 aa		4.73	□□□□□ -1.65
RACGAP1-223	ENST00000551260	IQCM	A0A1B0GVH7	501 aa		4.72	□□□□□ -1.65
RACGAP1-223	ENST00000551260		A0A1B0GVI7	797 aa		4.72	□□□□□ -1.65

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