RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 ACTL6AO96019 429 aa12.38□□□□□ -0.43
HDAC7-228ENST00000548938 PNPP00491 289 aa12.38□□□□□ -0.43
HDAC7-228ENST00000548938 F12P00748 615 aaPredicted RBP12.38□□□□□ -0.43
HDAC7-228ENST00000548938 CT45A8P0DMV1 189 aa12.38□□□□□ -0.43
HDAC7-228ENST00000548938 CT45A9P0DMV2 189 aa12.38□□□□□ -0.43
HDAC7-228ENST00000548938 RAB38P57729 211 aa12.38□□□□□ -0.43
HDAC7-228ENST00000548938 EGR4Q05215 589 aa12.38□□□□□ -0.43
HDAC7-228ENST00000548938 MEP1BQ16820 701 aa12.38□□□□□ -0.43
HDAC7-228ENST00000548938 CT45A2Q5DJT8 189 aa12.38□□□□□ -0.43
HDAC7-228ENST00000548938 VWA2Q5GFL6 755 aa12.38□□□□□ -0.43
HDAC7-228ENST00000548938 OR10K2Q6IF99 312 aa12.38□□□□□ -0.43
HDAC7-228ENST00000548938 C3orf33Q6P1S2 294 aa12.38□□□□□ -0.43
HDAC7-228ENST00000548938 RAB11FIP2Q7L804 512 aa12.38□□□□□ -0.43
HDAC7-228ENST00000548938 ATG4DQ86TL0 474 aaPredicted RBP12.38□□□□□ -0.43
HDAC7-228ENST00000548938 BCORP1Q8N888 145 aa12.38□□□□□ -0.43
HDAC7-228ENST00000548938 ZNF524Q96C55 264 aa12.38□□□□□ -0.43
HDAC7-228ENST00000548938 IFT22Q9H7X7 185 aa12.38□□□□□ -0.43
HDAC7-228ENST00000548938 CYB5R1Q9UHQ9 305 aa12.38□□□□□ -0.43
HDAC7-228ENST00000548938 COL4A2P08572 1712 aa12.37□□□□□ -0.43
HDAC7-228ENST00000548938 VCANP13611 3396 aa12.37□□□□□ -0.43
HDAC7-228ENST00000548938 RAB19A4D1S5 217 aa12.37□□□□□ -0.43
HDAC7-228ENST00000548938 OR6C76A6NM76 312 aa12.37□□□□□ -0.43
HDAC7-228ENST00000548938 OR2AT4A6NND4 320 aa12.37□□□□□ -0.43
HDAC7-228ENST00000548938 TXNDC12O95881 172 aa12.37□□□□□ -0.43
HDAC7-228ENST00000548938 ASAH2BP0C7U1 165 aa12.37□□□□□ -0.43
HDAC7-228ENST00000548938 RAB13P51153 203 aa12.37□□□□□ -0.43
HDAC7-228ENST00000548938 SRSF3P84103 164 aaKnown RBP12.37□□□□□ -0.43
HDAC7-228ENST00000548938 PPP1R1AQ13522 171 aa12.37□□□□□ -0.43
HDAC7-228ENST00000548938 CD226Q15762 336 aa12.37□□□□□ -0.43
HDAC7-228ENST00000548938 DEFB110Q30KQ9 67 aa12.37□□□□□ -0.43
HDAC7-228ENST00000548938 GLYATL3Q5SZD4 288 aa12.37□□□□□ -0.43
HDAC7-228ENST00000548938 EEF1A1P5Q5VTE0 462 aa12.37□□□□□ -0.43
HDAC7-228ENST00000548938 TMEM225Q6GV28 225 aa12.37□□□□□ -0.43
HDAC7-228ENST00000548938 CD163Q86VB7 1156 aa12.37□□□□□ -0.43
HDAC7-228ENST00000548938 PM20D2Q8IYS1 436 aa12.37□□□□□ -0.43
HDAC7-228ENST00000548938 FAM174AQ8TBP5 190 aa12.37□□□□□ -0.43
HDAC7-228ENST00000548938 PATE1Q8WXA2 126 aa12.37□□□□□ -0.43
HDAC7-228ENST00000548938 KTI12Q96EK9 354 aaPredicted RBP12.37□□□□□ -0.43
HDAC7-228ENST00000548938 KLHDC3Q9BQ90 382 aa12.37□□□□□ -0.43
HDAC7-228ENST00000548938 TAS2R4Q9NYW5 299 aa12.37□□□□□ -0.43
HDAC7-228ENST00000548938 MBD2Q9UBB5 411 aa12.37□□□□□ -0.43
HDAC7-228ENST00000548938 TBC1D3DA0A087WVF3 549 aa12.37□□□□□ -0.43
HDAC7-228ENST00000548938 TMEM235A6NFC5 223 aa12.37□□□□□ -0.43
HDAC7-228ENST00000548938 TBC1D3LB9A6J9 549 aa12.37□□□□□ -0.43
HDAC7-228ENST00000548938 SULT1C2O00338 296 aa12.37□□□□□ -0.43
HDAC7-228ENST00000548938 DCNP07585 359 aaKnown RBP12.37□□□□□ -0.43
HDAC7-228ENST00000548938 GUSBP08236 651 aa12.37□□□□□ -0.43
HDAC7-228ENST00000548938 TBC1D3HP0C7X1 549 aa12.37□□□□□ -0.43
HDAC7-228ENST00000548938 TBC1D3CQ6IPX1 549 aa12.37□□□□□ -0.43
HDAC7-228ENST00000548938 CBLN3Q6UW01 205 aa12.37□□□□□ -0.43
HDAC7-228ENST00000548938 TBC1D3Q8IZP1 549 aaPredicted RBP12.37□□□□□ -0.43
HDAC7-228ENST00000548938 OTOSQ8NHW6 89 aa12.37□□□□□ -0.43
HDAC7-228ENST00000548938 BAHD1Q8TBE0 780 aaPredicted RBP12.37□□□□□ -0.43
HDAC7-228ENST00000548938 G6PC3Q9BUM1 346 aa12.37□□□□□ -0.43
HDAC7-228ENST00000548938 CST11Q9H112 138 aa12.37□□□□□ -0.43
HDAC7-228ENST00000548938 SCPEP1Q9HB40 452 aa12.37□□□□□ -0.43
HDAC7-228ENST00000548938 COA4Q9NYJ1 87 aa12.37□□□□□ -0.43
HDAC7-228ENST00000548938 TMEM14AQ9Y6G1 99 aa12.37□□□□□ -0.43
HDAC7-228ENST00000548938 FITM1A5D6W6 292 aa12.36□□□□□ -0.43
HDAC7-228ENST00000548938 CD74P04233 296 aa12.36□□□□□ -0.43
HDAC7-228ENST00000548938 APODP05090 189 aa12.36□□□□□ -0.43
HDAC7-228ENST00000548938 ZBTB25P24278 435 aa12.36□□□□□ -0.43
HDAC7-228ENST00000548938 HTR2CP28335 458 aa12.36□□□□□ -0.43
HDAC7-228ENST00000548938 AVPR2P30518 371 aa12.36□□□□□ -0.43
HDAC7-228ENST00000548938 PRKXP51817 358 aa12.36□□□□□ -0.43
HDAC7-228ENST00000548938 PPP1CAP62136 330 aa12.36□□□□□ -0.43
HDAC7-228ENST00000548938 MFGE8Q08431 387 aaPredicted RBP12.36□□□□□ -0.43
HDAC7-228ENST00000548938 OR7A5Q15622 319 aa12.36□□□□□ -0.43
HDAC7-228ENST00000548938 INPP5JQ15735 1006 aaPredicted RBP12.36□□□□□ -0.43
HDAC7-228ENST00000548938 TMEM71Q6P5X7 295 aa12.36□□□□□ -0.43
HDAC7-228ENST00000548938 CORO6Q6QEF8 472 aa12.36□□□□□ -0.43
HDAC7-228ENST00000548938 RHOUQ7L0Q8 258 aa12.36□□□□□ -0.43
HDAC7-228ENST00000548938 ARMC10Q8N2F6 343 aa12.36□□□□□ -0.43
HDAC7-228ENST00000548938 LINC00469Q8N7U9 141 aa12.36□□□□□ -0.43
HDAC7-228ENST00000548938 OR51A2Q8NGJ7 313 aa12.36□□□□□ -0.43
HDAC7-228ENST00000548938 ASB12Q8WXK4 309 aa12.36□□□□□ -0.43
HDAC7-228ENST00000548938 RSC1A1Q92681 617 aa12.36□□□□□ -0.43
HDAC7-228ENST00000548938 OR8B4Q96RC9 309 aa12.36□□□□□ -0.43
HDAC7-228ENST00000548938 MKL2Q9ULH7 1088 aa12.36□□□□□ -0.43
HDAC7-228ENST00000548938 MRPS18BQ9Y676 258 aaKnown RBP12.36□□□□□ -0.43
HDAC7-228ENST00000548938 PRUNE2Q8WUY3 3088 aa12.36□□□□□ -0.43
HDAC7-228ENST00000548938 PLRG1O43660 514 aaKnown RBP12.36□□□□□ -0.43
HDAC7-228ENST00000548938 RENP00797 406 aa12.36□□□□□ -0.43
HDAC7-228ENST00000548938 HLA-DQA2P01906 255 aa12.36□□□□□ -0.43
HDAC7-228ENST00000548938 SEC13P55735 322 aa12.36□□□□□ -0.43
HDAC7-228ENST00000548938 PMPCAQ10713 525 aa12.36□□□□□ -0.43
HDAC7-228ENST00000548938 SLC17A1Q14916 467 aa12.36□□□□□ -0.43
HDAC7-228ENST00000548938 TOMM20Q15388 145 aa12.36□□□□□ -0.43
HDAC7-228ENST00000548938 ZNF528Q3MIS6 628 aa12.36□□□□□ -0.43
HDAC7-228ENST00000548938 PLEKHN1Q494U1 663 aaPredicted RBP12.36□□□□□ -0.43
HDAC7-228ENST00000548938 WBP2NLQ6ICG8 309 aa12.36□□□□□ -0.43
HDAC7-228ENST00000548938 PAPD4Q6PIY7 484 aaKnown RBP12.36□□□□□ -0.43
HDAC7-228ENST00000548938 C16orf52Q8NHV5 167 aa12.36□□□□□ -0.43
HDAC7-228ENST00000548938 PAQR8Q8TEZ7 354 aa12.36□□□□□ -0.43
HDAC7-228ENST00000548938 MRGPRFQ96AM1 343 aa12.36□□□□□ -0.43
HDAC7-228ENST00000548938 CMKLR1Q99788 373 aa12.36□□□□□ -0.43
HDAC7-228ENST00000548938 DHDHQ9UQ10 334 aa12.36□□□□□ -0.43
HDAC7-228ENST00000548938 CACNA1IQ9P0X4 2223 aa12.35□□□□□ -0.43
HDAC7-228ENST00000548938 ARHGEF17Q96PE2 2063 aaPredicted RBP12.35□□□□□ -0.43
HDAC7-228ENST00000548938 DCDC2BA2VCK2 349 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms