RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 INSL6Q9Y581 213 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 KIR2DS5A0A0G2JLQ3 304 aa11.73□□□□□ -0.53
PTCH1-212ENST00000546744 A0A0G2JNG1 304 aa11.73□□□□□ -0.53
PTCH1-212ENST00000546744 KIR2DS3K7RE56 304 aa11.73□□□□□ -0.53
PTCH1-212ENST00000546744 SLC17A2O00624 439 aa11.73□□□□□ -0.53
PTCH1-212ENST00000546744 ANGPTL7O43827 346 aa11.73□□□□□ -0.53
PTCH1-212ENST00000546744 ACKR3P25106 362 aa11.73□□□□□ -0.53
PTCH1-212ENST00000546744 SUMO1P63165 101 aaKnown RBP11.73□□□□□ -0.53
PTCH1-212ENST00000546744 HIST1H3AP68431 136 aa11.73□□□□□ -0.53
PTCH1-212ENST00000546744 CDK5Q00535 292 aa11.73□□□□□ -0.53
PTCH1-212ENST00000546744 KIR2DS5Q14953 304 aa11.73□□□□□ -0.53
PTCH1-212ENST00000546744 PINX1Q96BK5 328 aaKnown RBP11.73□□□□□ -0.53
PTCH1-212ENST00000546744 CHRDL1Q9BU40 450 aa11.73□□□□□ -0.53
PTCH1-212ENST00000546744 JAM3Q9BX67 310 aa11.73□□□□□ -0.53
PTCH1-212ENST00000546744 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-212ENST00000546744 CITO14578 2027 aa11.73□□□□□ -0.53
PTCH1-212ENST00000546744 FKBP2P26885 142 aaKnown RBP11.73□□□□□ -0.53
PTCH1-212ENST00000546744 EPHA2P29317 976 aa11.73□□□□□ -0.53
PTCH1-212ENST00000546744 GUK1Q16774 197 aa11.73□□□□□ -0.53
PTCH1-212ENST00000546744 SLC25A30Q5SVS4 291 aa11.73□□□□□ -0.53
PTCH1-212ENST00000546744 TMEM184AQ6ZMB5 413 aa11.73□□□□□ -0.53
PTCH1-212ENST00000546744 SIGLECL1Q8N7X8 197 aa11.73□□□□□ -0.53
PTCH1-212ENST00000546744 V9GYH0 126 aa11.73□□□□□ -0.53
PTCH1-212ENST00000546744 FIGNL2A6NMB9 653 aa11.73□□□□□ -0.53
PTCH1-212ENST00000546744 B4DEV8 164 aa11.73□□□□□ -0.53
PTCH1-212ENST00000546744 IGHA2P01877 340 aa11.73□□□□□ -0.53
PTCH1-212ENST00000546744 DHPSP49366 369 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-212ENST00000546744 VASPP50552 380 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-212ENST00000546744 RAB38P57729 211 aa11.73□□□□□ -0.53
PTCH1-212ENST00000546744 HNRNPKP61978 463 aaKnown RBP eCLIP11.73□□□□□ -0.53
PTCH1-212ENST00000546744 GRB2P62993 217 aaKnown RBP11.73□□□□□ -0.53
PTCH1-212ENST00000546744 STAC2Q6ZMT1 411 aa11.73□□□□□ -0.53
PTCH1-212ENST00000546744 RHOUQ7L0Q8 258 aa11.73□□□□□ -0.53
PTCH1-212ENST00000546744 CHST14Q8NCH0 376 aa11.73□□□□□ -0.53
PTCH1-212ENST00000546744 CLSTN3Q9BQT9 956 aa11.73□□□□□ -0.53
PTCH1-212ENST00000546744 MCM3APO60318 1980 aa11.73□□□□□ -0.53
PTCH1-212ENST00000546744 A0A1W2PQU0 124 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 OR6C76A6NM76 312 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 HMGN4O00479 90 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 C1QAP02745 245 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 HBQ1P09105 142 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 NOVA1P51513 510 aaKnown RBP11.72□□□□□ -0.53
PTCH1-212ENST00000546744 ZNF85Q03923 595 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 GPNMBQ14956 572 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 NKG7Q16617 165 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 ARHGAP11BQ3KRB8 267 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 ZNF574Q6ZN55 896 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-212ENST00000546744 MRPL21Q7Z2W9 205 aaKnown RBP11.72□□□□□ -0.53
PTCH1-212ENST00000546744 NLGN4YQ8NFZ3 816 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-212ENST00000546744 OR10D4PQ8NGN7 298 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 SUCNR1Q9BXA5 334 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 ADAMTS4O75173 837 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 GLSO94925 669 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-212ENST00000546744 CD3DP04234 171 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 CCNOP22674 350 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 ZNF273Q14593 569 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 HPSE2Q8WWQ2 592 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 OR1F2PQ96R84 312 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 PIGQQ9BRB3 760 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 FLVCR2Q9UPI3 526 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 TIMM8BQ9Y5J9 83 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-212ENST00000546744 IGLON5A6NGN9 336 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 GPR31O00270 319 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 CCSO14618 274 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 PHF1O43189 567 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-212ENST00000546744 RNGTTO60942 597 aaKnown RBP11.72□□□□□ -0.53
PTCH1-212ENST00000546744 LY86O95711 162 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 APOA2P02652 100 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 C1SP09871 688 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 NPPBP16860 134 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 FASLGP48023 281 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 NPY4RP50391 375 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 OR10A3P58181 314 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 EEF1A1P5Q5VTE0 462 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 ABLIM2Q6H8Q1 611 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 GPX8Q8TED1 209 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 PEX11GQ96HA9 241 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 C20orf24Q9BUV8 137 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 TNFRSF12AQ9NP84 129 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 LTB4R2Q9NPC1 389 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 ZNF331Q9NQX6 463 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-212ENST00000546744 CXorf51AA0A1B0GTR3 108 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 MYADML2A6NDP7 307 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 SMAD6O43541 496 aaKnown RBP11.72□□□□□ -0.53
PTCH1-212ENST00000546744 NME2P1O60361 137 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 DCTDP32321 178 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 C21orf58P58505 322 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 PKIAP61925 76 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 VAMP3Q15836 100 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 HNRNPA1L2Q32P51 320 aaKnown RBP11.72□□□□□ -0.53
PTCH1-212ENST00000546744 NCR3LG1Q68D85 454 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 FAM180BQ6P0A1 224 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 LINC00052Q96N35 136 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 TAAR2Q9P1P5 351 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 MIOXQ9UGB7 285 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 PADI1Q9ULC6 663 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 FOXJ3Q9UPW0 622 aa11.72□□□□□ -0.53
PTCH1-212ENST00000546744 TRAPPC2LH3BP13 241 aa11.71□□□□□ -0.53
PTCH1-212ENST00000546744 PYCARD-AS1I3L0S3 204 aa11.71□□□□□ -0.53
PTCH1-212ENST00000546744 HRO43593 1189 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms