RNA–Protein interactions for RNA: ENST00000544301.6

VIM-209, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best)

Gene VIM, Length 2,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-209ENST00000544301 H3BML4 177 aa16.13■□□□□ 0.17
VIM-209ENST00000544301 H7C417 338 aa16.13■□□□□ 0.17
VIM-209ENST00000544301 ALX3O95076 343 aa16.13■□□□□ 0.17
VIM-209ENST00000544301 CAMK2DQ13557 499 aa16.13■□□□□ 0.17
VIM-209ENST00000544301 METTL11BQ5VVY1 283 aa16.13■□□□□ 0.17
VIM-209ENST00000544301 LYPD8Q6UX82 237 aa16.13■□□□□ 0.17
VIM-209ENST00000544301 SEZ6L2Q6UXD5 910 aa16.13■□□□□ 0.17
VIM-209ENST00000544301 ZNF767PQ75MW2 155 aa16.13■□□□□ 0.17
VIM-209ENST00000544301 LINC00346Q8IVM7 164 aa16.13■□□□□ 0.17
VIM-209ENST00000544301 PLPP7Q8NBV4 271 aa16.13■□□□□ 0.17
VIM-209ENST00000544301 ST7LQ8TDW4 575 aa16.13■□□□□ 0.17
VIM-209ENST00000544301 C5orf34Q96MH7 638 aa16.13■□□□□ 0.17
VIM-209ENST00000544301 POTEKPQ9BYX7 375 aa16.13■□□□□ 0.17
VIM-209ENST00000544301 DIABLOQ9NR28 239 aa16.13■□□□□ 0.17
VIM-209ENST00000544301 PPP4R1LQ9P1A2 415 aa16.13■□□□□ 0.17
VIM-209ENST00000544301 MTFP1Q9UDX5 166 aa16.13■□□□□ 0.17
VIM-209ENST00000544301 NPTNQ9Y639 398 aa16.13■□□□□ 0.17
VIM-209ENST00000544301 CIB4A0PJX0 185 aa16.12■□□□□ 0.17
VIM-209ENST00000544301 RBBP9O75884 186 aa16.12■□□□□ 0.17
VIM-209ENST00000544301 ZFAND5O76080 213 aa16.12■□□□□ 0.17
VIM-209ENST00000544301 IGFBP3P17936 291 aaPredicted RBP16.12■□□□□ 0.17
VIM-209ENST00000544301 PTGDSP41222 190 aa16.12■□□□□ 0.17
VIM-209ENST00000544301 RAD52P43351 418 aa16.12■□□□□ 0.17
VIM-209ENST00000544301 FAM69BQ5VUD6 431 aa16.12■□□□□ 0.17
VIM-209ENST00000544301 ZNF782Q6ZMW2 699 aaPredicted RBP16.12■□□□□ 0.17
VIM-209ENST00000544301 OR1J4Q8NGS1 313 aa16.12■□□□□ 0.17
VIM-209ENST00000544301 SLC25A28Q96A46 364 aa16.12■□□□□ 0.17
VIM-209ENST00000544301 NKX3-1Q99801 234 aaPredicted RBP16.12■□□□□ 0.17
VIM-209ENST00000544301 CRB3Q9BUF7 120 aa16.12■□□□□ 0.17
VIM-209ENST00000544301 APMAPQ9HDC9 416 aa16.12■□□□□ 0.17
VIM-209ENST00000544301 TAS2R4Q9NYW5 299 aa16.12■□□□□ 0.17
VIM-209ENST00000544301 MYOTQ9UBF9 498 aa16.12■□□□□ 0.17
VIM-209ENST00000544301 CKLFQ9UBR5 152 aa16.12■□□□□ 0.17
VIM-209ENST00000544301 A0A1W2PPC1 479 aa16.12■□□□□ 0.17
VIM-209ENST00000544301 ERVH48-1M5A8F1 160 aa16.12■□□□□ 0.17
VIM-209ENST00000544301 AQP8O94778 261 aa16.12■□□□□ 0.17
VIM-209ENST00000544301 NDUFB6O95139 128 aa16.12■□□□□ 0.17
VIM-209ENST00000544301 CD2P06729 351 aa16.12■□□□□ 0.17
VIM-209ENST00000544301 MSX1P28360 303 aa16.12■□□□□ 0.17
VIM-209ENST00000544301 ZNF41P51814 821 aaPredicted RBP16.12■□□□□ 0.17
VIM-209ENST00000544301 SLC25A53Q5H9E4 307 aa16.12■□□□□ 0.17
VIM-209ENST00000544301 SLC25A25Q6KCM7 469 aa16.12■□□□□ 0.17
VIM-209ENST00000544301 TMEM205Q6UW68 189 aa16.12■□□□□ 0.17
VIM-209ENST00000544301 OR10G3Q8NGC4 313 aa16.12■□□□□ 0.17
VIM-209ENST00000544301 UTP23Q9BRU9 249 aaKnown RBP16.12■□□□□ 0.17
VIM-209ENST00000544301 ZNF436Q9C0F3 470 aaPredicted RBP16.12■□□□□ 0.17
VIM-209ENST00000544301 G6PC2Q9NQR9 355 aa16.12■□□□□ 0.17
VIM-209ENST00000544301 SLC17A5Q9NRA2 495 aa16.12■□□□□ 0.17
VIM-209ENST00000544301 ALKBH4Q9NXW9 302 aa16.12■□□□□ 0.17
VIM-209ENST00000544301 PCDHGA5Q9Y5G8 931 aa16.12■□□□□ 0.17
VIM-209ENST00000544301 ADAMTS9Q9P2N4 1935 aa16.11■□□□□ 0.17
VIM-209ENST00000544301 TRIOBPQ9H2D6 2365 aa16.11■□□□□ 0.17
VIM-209ENST00000544301 TMEM272A0A1B0GTI8 110 aa16.11■□□□□ 0.17
VIM-209ENST00000544301 ICMTO60725 284 aa16.11■□□□□ 0.17
VIM-209ENST00000544301 OR2J2O76002 312 aa16.11■□□□□ 0.17
VIM-209ENST00000544301 KDM4BO94953 1096 aa16.11■□□□□ 0.17
VIM-209ENST00000544301 FSTP19883 344 aa16.11■□□□□ 0.17
VIM-209ENST00000544301 SELENOPP49908 381 aa16.11■□□□□ 0.17
VIM-209ENST00000544301 PLPPR5Q32ZL2 321 aa16.11■□□□□ 0.17
VIM-209ENST00000544301 PCGF3Q3KNV8 242 aa16.11■□□□□ 0.17
VIM-209ENST00000544301 GLT8D1Q68CQ7 371 aa16.11■□□□□ 0.17
VIM-209ENST00000544301 GLDNQ6ZMI3 551 aaPredicted RBP16.11■□□□□ 0.17
VIM-209ENST00000544301 PPP1R3BQ86XI6 285 aa16.11■□□□□ 0.17
VIM-209ENST00000544301 POC1BQ8TC44 478 aa16.11■□□□□ 0.17
VIM-209ENST00000544301 MRGPRX4Q96LA9 322 aa16.11■□□□□ 0.17
VIM-209ENST00000544301 SEC22CQ9BRL7 303 aa16.11■□□□□ 0.17
VIM-209ENST00000544301 FANCFQ9NPI8 374 aa16.11■□□□□ 0.17
VIM-209ENST00000544301 NPDC1Q9NQX5 325 aaPredicted RBP16.11■□□□□ 0.17
VIM-209ENST00000544301 PRMT8Q9NR22 394 aaPredicted RBP16.11■□□□□ 0.17
VIM-209ENST00000544301 SCP2D1Q9UJQ7 156 aa16.11■□□□□ 0.17
VIM-209ENST00000544301 OR52A1Q9UKL2 312 aa16.11■□□□□ 0.17
VIM-209ENST00000544301 B3GALT5Q9Y2C3 310 aa16.11■□□□□ 0.17
VIM-209ENST00000544301 TRAV18A0A075B6X5 111 aa16.1■□□□□ 0.17
VIM-209ENST00000544301 IGLV3-32A0A0A0MS00 114 aa16.1■□□□□ 0.17
VIM-209ENST00000544301 DOK2O60496 412 aa16.1■□□□□ 0.17
VIM-209ENST00000544301 TSC22D2O75157 780 aa16.1■□□□□ 0.17
VIM-209ENST00000544301 CD37P11049 281 aa16.1■□□□□ 0.17
VIM-209ENST00000544301 HLA-BQ31612 363 aa16.1■□□□□ 0.17
VIM-209ENST00000544301 LRFN4Q6PJG9 635 aa16.1■□□□□ 0.17
VIM-209ENST00000544301 NLRC3Q7RTR2 1065 aa16.1■□□□□ 0.17
VIM-209ENST00000544301 OR13C3Q8NGS6 347 aa16.1■□□□□ 0.17
VIM-209ENST00000544301 SLC25A44Q96H78 314 aaPredicted RBP16.1■□□□□ 0.17
VIM-209ENST00000544301 EMC6Q9BV81 110 aa16.1■□□□□ 0.17
VIM-209ENST00000544301 METTL7AQ9H8H3 244 aa16.1■□□□□ 0.17
VIM-209ENST00000544301 SERINC1Q9NRX5 453 aa16.1■□□□□ 0.17
VIM-209ENST00000544301 HHLA2Q9UM44 414 aa16.1■□□□□ 0.17
VIM-209ENST00000544301 LOC107986453A0A1B0GWG9 222 aa16.1■□□□□ 0.17
VIM-209ENST00000544301 ISG15P05161 165 aa16.1■□□□□ 0.17
VIM-209ENST00000544301 ANXA7P20073 488 aaKnown RBP16.1■□□□□ 0.17
VIM-209ENST00000544301 BIDP55957 195 aa16.1■□□□□ 0.17
VIM-209ENST00000544301 GUCA2AQ02747 115 aa16.1■□□□□ 0.17
VIM-209ENST00000544301 C19orf57Q0VDD7 668 aa16.1■□□□□ 0.17
VIM-209ENST00000544301 MYBPHQ13203 477 aa16.1■□□□□ 0.17
VIM-209ENST00000544301 CORO6Q6QEF8 472 aa16.1■□□□□ 0.17
VIM-209ENST00000544301 DEGS2Q6QHC5 323 aa16.1■□□□□ 0.17
VIM-209ENST00000544301 NHLRC1Q6VVB1 395 aa16.1■□□□□ 0.17
VIM-209ENST00000544301 MED30Q96HR3 178 aa16.1■□□□□ 0.17
VIM-209ENST00000544301 CMKLR1Q99788 373 aa16.1■□□□□ 0.17
VIM-209ENST00000544301 SLC26A1Q9H2B4 701 aa16.1■□□□□ 0.17
VIM-209ENST00000544301 AKIRIN1Q9H9L7 192 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms