RNA–Protein interactions for RNA: ENST00000543794.5

LPCAT3-211, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-211ENST00000543794 C9orf139Q6ZV77 190 aa16.79■□□□□ 0.28
LPCAT3-211ENST00000543794 ALDH16A1Q8IZ83 802 aa16.79■□□□□ 0.28
LPCAT3-211ENST00000543794 NSMAFQ92636 917 aa16.79■□□□□ 0.28
LPCAT3-211ENST00000543794 HDAC2Q92769 488 aaKnown RBP16.79■□□□□ 0.28
LPCAT3-211ENST00000543794 WNT5BQ9H1J7 359 aa16.79■□□□□ 0.28
LPCAT3-211ENST00000543794 ELOVL3Q9HB03 270 aa16.79■□□□□ 0.28
LPCAT3-211ENST00000543794 NKIRAS1Q9NYS0 192 aa16.79■□□□□ 0.28
LPCAT3-211ENST00000543794 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.79■□□□□ 0.28
LPCAT3-211ENST00000543794 V9GYY5 206 aaPredicted RBP16.79■□□□□ 0.28
LPCAT3-211ENST00000543794 VWFP04275 2813 aa16.78■□□□□ 0.28
LPCAT3-211ENST00000543794 OR7A10O76100 309 aa16.78■□□□□ 0.28
LPCAT3-211ENST00000543794 TGDSO95455 350 aa16.78■□□□□ 0.28
LPCAT3-211ENST00000543794 PPIAL4GP0DN37 164 aa16.78■□□□□ 0.28
LPCAT3-211ENST00000543794 MDKP21741 143 aaPredicted RBP16.78■□□□□ 0.28
LPCAT3-211ENST00000543794 CD80P33681 288 aa16.78■□□□□ 0.28
LPCAT3-211ENST00000543794 MTNR1AP48039 350 aa16.78■□□□□ 0.28
LPCAT3-211ENST00000543794 IDH3AP50213 366 aa16.78■□□□□ 0.28
LPCAT3-211ENST00000543794 BTG1P62324 171 aa16.78■□□□□ 0.28
LPCAT3-211ENST00000543794 C16orf87Q6PH81 154 aa16.78■□□□□ 0.28
LPCAT3-211ENST00000543794 ZER1Q7Z7L7 766 aa16.78■□□□□ 0.28
LPCAT3-211ENST00000543794 OR52E2Q8NGJ4 325 aa16.78■□□□□ 0.28
LPCAT3-211ENST00000543794 LIPHQ8WWY8 451 aa16.78■□□□□ 0.28
LPCAT3-211ENST00000543794 C4orf45Q96LM5 186 aa16.78■□□□□ 0.28
LPCAT3-211ENST00000543794 SIGLEC11Q96RL6 698 aa16.78■□□□□ 0.28
LPCAT3-211ENST00000543794 NANOGQ9H9S0 305 aa16.78■□□□□ 0.28
LPCAT3-211ENST00000543794 TIMM10BQ9Y5J6 103 aa16.78■□□□□ 0.28
LPCAT3-211ENST00000543794 MMP24Q9Y5R2 645 aa16.78■□□□□ 0.28
LPCAT3-211ENST00000543794 NPIPB13A6NJU9 1138 aa16.77■□□□□ 0.28
LPCAT3-211ENST00000543794 NPIPB4C9JG80 1138 aa16.77■□□□□ 0.28
LPCAT3-211ENST00000543794 TIMM8AO60220 97 aaPredicted RBP16.77■□□□□ 0.28
LPCAT3-211ENST00000543794 IGF2P01344 180 aa16.77■□□□□ 0.28
LPCAT3-211ENST00000543794 VIMP08670 466 aaKnown RBP16.77■□□□□ 0.28
LPCAT3-211ENST00000543794 CST2P09228 141 aa16.77■□□□□ 0.28
LPCAT3-211ENST00000543794 IGHV4-38-2P0DP08 117 aa16.77■□□□□ 0.28
LPCAT3-211ENST00000543794 TNFRSF1AP19438 455 aa16.77■□□□□ 0.28
LPCAT3-211ENST00000543794 LAP3P28838 519 aa16.77■□□□□ 0.28
LPCAT3-211ENST00000543794 ARHGDIAP52565 204 aa16.77■□□□□ 0.28
LPCAT3-211ENST00000543794 FMODQ06828 376 aa16.77■□□□□ 0.28
LPCAT3-211ENST00000543794 ZMYND11Q15326 602 aa16.77■□□□□ 0.28
LPCAT3-211ENST00000543794 CYP51A1Q16850 503 aa16.77■□□□□ 0.28
LPCAT3-211ENST00000543794 AGKQ53H12 422 aa16.77■□□□□ 0.28
LPCAT3-211ENST00000543794 PATL1Q86TB9 770 aaKnown RBP16.77■□□□□ 0.28
LPCAT3-211ENST00000543794 MOSPD2Q8NHP6 518 aa16.77■□□□□ 0.28
LPCAT3-211ENST00000543794 PFN4Q8NHR9 129 aa16.77■□□□□ 0.28
LPCAT3-211ENST00000543794 TMIGD2Q96BF3 282 aa16.77■□□□□ 0.28
LPCAT3-211ENST00000543794 TAMM41Q96BW9 452 aa16.77■□□□□ 0.28
LPCAT3-211ENST00000543794 EBF4Q9BQW3 602 aa16.77■□□□□ 0.28
LPCAT3-211ENST00000543794 CCDC28BQ9BUN5 200 aa16.77■□□□□ 0.28
LPCAT3-211ENST00000543794 SOX21Q9Y651 276 aaPredicted RBP16.77■□□□□ 0.28
LPCAT3-211ENST00000543794 GMNCA6NCL1 334 aa16.76■□□□□ 0.27
LPCAT3-211ENST00000543794 NR2C1P13056 603 aa16.76■□□□□ 0.27
LPCAT3-211ENST00000543794 TNFSF4P23510 183 aa16.76■□□□□ 0.27
LPCAT3-211ENST00000543794 RBM34P42696 430 aaKnown RBP16.76■□□□□ 0.27
LPCAT3-211ENST00000543794 PAX2Q02962 417 aa16.76■□□□□ 0.27
LPCAT3-211ENST00000543794 CD47Q08722 323 aa16.76■□□□□ 0.27
LPCAT3-211ENST00000543794 LAPTM4AQ15012 233 aa16.76■□□□□ 0.27
LPCAT3-211ENST00000543794 ESCO2Q56NI9 601 aa16.76■□□□□ 0.27
LPCAT3-211ENST00000543794 NKAIN4Q8IVV8 208 aa16.76■□□□□ 0.27
LPCAT3-211ENST00000543794 SLC30A8Q8IWU4 369 aa16.76■□□□□ 0.27
LPCAT3-211ENST00000543794 SGTBQ96EQ0 304 aa16.76■□□□□ 0.27
LPCAT3-211ENST00000543794 TXNIPQ9H3M7 391 aa16.76■□□□□ 0.27
LPCAT3-211ENST00000543794 MAN2C1Q9NTJ4 1040 aa16.76■□□□□ 0.27
LPCAT3-211ENST00000543794 C20orf141Q9NUB4 165 aa16.76■□□□□ 0.27
LPCAT3-211ENST00000543794 OR5V1Q9UGF6 321 aa16.76■□□□□ 0.27
LPCAT3-211ENST00000543794 IL20RAQ9UHF4 553 aa16.76■□□□□ 0.27
LPCAT3-211ENST00000543794 TANC2Q9HCD6 1990 aa16.75■□□□□ 0.27
LPCAT3-211ENST00000543794 WNT2P09544 360 aa16.75■□□□□ 0.27
LPCAT3-211ENST00000543794 TUBG1P23258 451 aa16.75■□□□□ 0.27
LPCAT3-211ENST00000543794 CPT2P23786 658 aa16.75■□□□□ 0.27
LPCAT3-211ENST00000543794 MDH2P40926 338 aaKnown RBP16.75■□□□□ 0.27
LPCAT3-211ENST00000543794 MAGOHP61326 146 aaKnown RBP16.75■□□□□ 0.27
LPCAT3-211ENST00000543794 PCBD1P61457 104 aa16.75■□□□□ 0.27
LPCAT3-211ENST00000543794 SELPLGQ14242 412 aa16.75■□□□□ 0.27
LPCAT3-211ENST00000543794 TAF11Q15544 211 aa16.75■□□□□ 0.27
LPCAT3-211ENST00000543794 ZNF774Q6NX45 483 aa16.75■□□□□ 0.27
LPCAT3-211ENST00000543794 ARL9Q6T311 187 aa16.75■□□□□ 0.27
LPCAT3-211ENST00000543794 Q6ZR03 302 aa16.75■□□□□ 0.27
LPCAT3-211ENST00000543794 JAZF1Q86VZ6 243 aa16.75■□□□□ 0.27
LPCAT3-211ENST00000543794 PARP8Q8N3A8 854 aa16.75■□□□□ 0.27
LPCAT3-211ENST00000543794 OR2Z1Q8NG97 314 aa16.75■□□□□ 0.27
LPCAT3-211ENST00000543794 UPRTQ96BW1 309 aa16.75■□□□□ 0.27
LPCAT3-211ENST00000543794 C7orf26Q96N11 449 aa16.75■□□□□ 0.27
LPCAT3-211ENST00000543794 ALG12Q9BV10 488 aa16.75■□□□□ 0.27
LPCAT3-211ENST00000543794 TUBG2Q9NRH3 451 aa16.75■□□□□ 0.27
LPCAT3-211ENST00000543794 TBCCD1Q9NVR7 557 aa16.75■□□□□ 0.27
LPCAT3-211ENST00000543794 IL19Q9UHD0 177 aa16.75■□□□□ 0.27
LPCAT3-211ENST00000543794 RAB21Q9UL25 225 aa16.75■□□□□ 0.27
LPCAT3-211ENST00000543794 IGHV3OR16-10A0A075B7F0 116 aa16.74■□□□□ 0.27
LPCAT3-211ENST00000543794 A0A1B0GUS0 222 aa16.74■□□□□ 0.27
LPCAT3-211ENST00000543794 GPANK1O95872 356 aa16.74■□□□□ 0.27
LPCAT3-211ENST00000543794 PLATP00750 562 aa16.74■□□□□ 0.27
LPCAT3-211ENST00000543794 KITLGP21583 273 aa16.74■□□□□ 0.27
LPCAT3-211ENST00000543794 OMGP23515 440 aa16.74■□□□□ 0.27
LPCAT3-211ENST00000543794 MTPNP58546 118 aa16.74■□□□□ 0.27
LPCAT3-211ENST00000543794 LRRN1Q6UXK5 716 aa16.74■□□□□ 0.27
LPCAT3-211ENST00000543794 FOXL2NBQ6ZUU3 175 aa16.74■□□□□ 0.27
LPCAT3-211ENST00000543794 SYT9Q86SS6 491 aa16.74■□□□□ 0.27
LPCAT3-211ENST00000543794 DPP10Q8N608 796 aa16.74■□□□□ 0.27
LPCAT3-211ENST00000543794 SLC26A7Q8TE54 656 aa16.74■□□□□ 0.27
LPCAT3-211ENST00000543794 TMEM255BQ8WV15 326 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms