RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 CSF1P09603 554 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 SELEP16581 610 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 CD34P28906 385 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 PPP5CP53041 499 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 TCTN1Q2MV58 587 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 Q6ZPB1 254 aaPredicted RBP6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 CFAP77Q6ZQR2 320 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 FCRLAQ7L513 359 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 KISS1RQ969F8 398 aaPredicted RBP6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 C7orf34Q96L11 122 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 AMBRA1Q9C0C7 1298 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 VN1R1Q9GZP7 353 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 TIMM10BQ9Y5J6 103 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 SCN1AP35498 2009 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 SVILO95425 2214 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 OTOL1A6NHN0 477 aaPredicted RBP6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 CD300LBA8K4G0 201 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 TOX4O94842 621 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 GSTP1P09211 210 aaKnown RBP6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 C21orf33P30042 268 aaPredicted RBP6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 ARR3P36575 388 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 CAV2P51636 162 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 F2RL1P55085 397 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 MLLT11Q13015 90 aaPredicted RBP6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 CATR1Q13166 79 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 ACER2Q5QJU3 275 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 OR2G6Q5TZ20 316 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 GDPD3Q7L5L3 318 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 OVCH1Q7RTY7 1134 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 PELI3Q8N2H9 469 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 GALNT16Q8N428 558 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 OR56B1Q8NGI3 324 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 OR5M9Q8NGP3 310 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 SLC7A13Q8TCU3 470 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 CNRIP1Q96F85 164 aaPredicted RBP6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 NDUFAF4Q9P032 175 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 IGLV3-16A0A075B6K0 115 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 ANKRD34BA5PLL1 514 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 M0R1B8 84 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 TNFRSF10AO00220 468 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 P2RY10O00398 339 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 HSPB6O14558 160 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 ZNF195O14628 629 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 TSPAN12O95859 305 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 TBXA2RP21731 343 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 IL3RAP26951 378 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 TAS2R31P59538 309 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 ZNF385BQ569K4 471 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 NKAIN4Q8IVV8 208 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 OR2V1Q8NHB1 315 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 APOBEC4Q8WW27 367 aaKnown RBP6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 TFAP2CQ92754 450 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 EMC7Q9NPA0 242 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 LHX9Q9NQ69 397 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 HDGFL3Q9Y3E1 203 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 LY75O60449 1722 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 GLCEO94923 617 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 ALPLP05186 524 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 SERPINA7P05543 415 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 CELA2BP08218 269 aaPredicted RBP6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 SLC35D3Q5M8T2 416 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 ZNF691Q5VV52 312 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 METAP1DQ6UB28 335 aaPredicted RBP6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 ACBD4Q8NC06 268 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 KCNG3Q8TAE7 436 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 CPNE4Q96A23 557 aaPredicted RBP6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 OPN3Q9H1Y3 402 aaPredicted RBP6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 RGCCQ9H4X1 137 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 TNS1Q9HBL0 1735 aaKnown RBP6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 H7C2Y5 167 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 ETHE1O95571 254 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 IFNA2P01563 188 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 SLC2A1P11166 492 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 NDUFB7P17568 137 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 DRD5P21918 477 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 MAP2K6P52564 334 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 DSCR4P56555 118 aaPredicted RBP6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 CXADRP78310 365 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 MEF2DQ14814 521 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 SLC9A3R2Q15599 337 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 ACKR1Q16570 336 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 ZNF181Q2M3W8 571 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 FDX2Q6P4F2 183 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 LYSMD2Q8IV50 215 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 C1orf87Q8N0U7 546 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 PFN4Q8NHR9 129 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 NANPQ8TBE9 248 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 LRFN5Q96NI6 719 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 PRRT1Q99946 306 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 SLC22A11Q9NSA0 550 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 HAO2Q9NYQ3 351 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 HSPB11Q9Y547 144 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 COL11A2P13942 1736 aaPredicted RBP6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 RIF1Q5UIP0 2472 aaKnown RBP6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 A0A096LPE4 126 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 A0A1W2PPZ6 126 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 ZNF732B4DXR9 585 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 K7EQM0 130 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 SEC14L2O76054 403 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms