RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 TMEM255AQ5JRV8 349 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 TMEM69Q5SWH9 247 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 SFRP5Q5T4F7 317 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 ZNF684Q5T5D7 378 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 ELP2Q6IA86 826 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 MFSD12Q6NUT3 480 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 C3orf33Q6P1S2 294 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 ANKRD16Q6P6B7 361 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 ALKAL2Q6UX46 152 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 PARS2Q7L3T8 475 aaKnown RBP6.92□□□□□ -1.3
CCDC60-204ENST00000539847 FCRLAQ7L513 359 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 DTX1Q86Y01 620 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 NRROSQ86YC3 692 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 ACOT4Q8N9L9 421 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 OR2L5Q8NG80 312 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 OR5J2Q8NH18 312 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 ST8SIA2Q92186 375 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 CDS1Q92903 461 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 ZG16BQ96DA0 208 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 BPIFA2Q96DR5 249 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 MS4A6EQ96DS6 147 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 ART5Q96L15 291 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 PRAP1Q96NZ9 151 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 MS4A4EQ96PG1 132 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 DERL3Q96Q80 235 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 STACQ99469 402 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 ZNF426Q9BUY5 554 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 TRIM2Q9C040 744 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 ZNF350Q9GZX5 532 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 SLC25A18Q9H1K4 315 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 OR2AG1Q9H205 316 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 TMEM27Q9HBJ8 222 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 ZNF304Q9HCX3 659 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 DUSP22Q9NRW4 184 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 ANKRD10Q9NXR5 420 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 OR5V1Q9UGF6 321 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 TAC3Q9UHF0 121 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 MOKQ9UQ07 419 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 AK6Q9Y3D8 172 aaKnown RBP6.92□□□□□ -1.3
CCDC60-204ENST00000539847 WDR45Q9Y484 360 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 COL27A1Q8IZC6 1860 aaPredicted RBP6.92□□□□□ -1.3
CCDC60-204ENST00000539847 TDRD6O60522 2096 aaKnown RBP6.91□□□□□ -1.3
CCDC60-204ENST00000539847 TEX15Q9BXT5 2789 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 A0A1B0GTI1 187 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 GXYLT2A0PJZ3 443 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 OR14I1A6ND48 311 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 IGLON5A6NGN9 336 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 PYCARD-AS1I3L0S3 204 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 PIN1P1O15428 100 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 ARPC5O15511 151 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 FGF16O43320 207 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 BCL2L11O43521 198 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 LCMT2O60294 686 aaKnown RBP6.91□□□□□ -1.3
CCDC60-204ENST00000539847 IL33O95760 270 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 S100A8P05109 93 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 VSIG10L2P0DP72 767 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 MYF5P13349 255 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 APEHP13798 732 aaKnown RBP6.91□□□□□ -1.3
CCDC60-204ENST00000539847 FOLR2P14207 255 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 ANXA7P20073 488 aaKnown RBP6.91□□□□□ -1.3
CCDC60-204ENST00000539847 EDNRAP25101 427 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 STARP49675 285 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 CAPZA1P52907 286 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 SLC25A1P53007 311 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 PSMD4P55036 377 aaKnown RBP6.91□□□□□ -1.3
CCDC60-204ENST00000539847 STXBP1P61764 594 aaKnown RBP6.91□□□□□ -1.3
CCDC60-204ENST00000539847 ZFP36L1Q07352 338 aaKnown RBP6.91□□□□□ -1.3
CCDC60-204ENST00000539847 CRMP1Q14194 572 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 HFEQ30201 348 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 GLT8D1Q68CQ7 371 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 FAHD2BQ6P2I3 314 aaPredicted RBP6.91□□□□□ -1.3
CCDC60-204ENST00000539847 ZNF813Q6ZN06 617 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 ZNF793Q6ZN11 406 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 DPY19L2P2Q6ZN68 376 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 ZNF836Q6ZNA1 936 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 Q6ZS46 218 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 ACOT7LQ6ZUV0 252 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 NDUFAF7Q7L592 441 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 ZNF546Q86UE3 836 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 GKN2Q86XP6 184 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 SLC35F2Q8IXU6 374 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 ZNF595Q8IYB9 648 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 SPAG16Q8N0X2 631 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 ZNF619Q8N2I2 560 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 C12orf45Q8N5I9 185 aaPredicted RBP6.91□□□□□ -1.3
CCDC60-204ENST00000539847 DTX3Q8N9I9 347 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 TMEM229BQ8NBD8 167 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 MFSD9Q8NBP5 474 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 BPIFCQ8NFQ6 507 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 OR10K1Q8NGX5 313 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 OR2L8Q8NGY9 312 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 SYNPRQ8TBG9 265 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 GPR148Q8TDV2 347 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 SNX33Q8WV41 574 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 PCNPQ8WW12 178 aaKnown RBP6.91□□□□□ -1.3
CCDC60-204ENST00000539847 WFDC12Q8WWY7 111 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 NUS1Q96E22 293 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 FAHD2AQ96GK7 314 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 SDF2Q99470 211 aa6.91□□□□□ -1.3
CCDC60-204ENST00000539847 GFI1Q99684 422 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms