RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 DYNLRB1Q9NP97 96 aa12.83□□□□□ -0.36
USB1-203ENST00000539737 TREM2Q9NZC2 230 aa12.83□□□□□ -0.36
USB1-203ENST00000539737 GRHPRQ9UBQ7 328 aa12.83□□□□□ -0.36
USB1-203ENST00000539737 METRNQ9UJH8 293 aa12.83□□□□□ -0.36
USB1-203ENST00000539737 FBXL3Q9UKT7 428 aa12.83□□□□□ -0.36
USB1-203ENST00000539737 IGHV2OR16-5A0A0B4J2B6 119 aa12.82□□□□□ -0.36
USB1-203ENST00000539737 XKRYO14609 159 aa12.82□□□□□ -0.36
USB1-203ENST00000539737 DHHO43323 396 aa12.82□□□□□ -0.36
USB1-203ENST00000539737 FKBP6O75344 327 aa12.82□□□□□ -0.36
USB1-203ENST00000539737 AVPP01185 164 aa12.82□□□□□ -0.36
USB1-203ENST00000539737 IGKV3-15P01624 115 aa12.82□□□□□ -0.36
USB1-203ENST00000539737 IGLV1-44P01699 117 aa12.82□□□□□ -0.36
USB1-203ENST00000539737 HPXP02790 462 aa12.82□□□□□ -0.36
USB1-203ENST00000539737 QDPRP09417 244 aa12.82□□□□□ -0.36
USB1-203ENST00000539737 NPR2P20594 1047 aa12.82□□□□□ -0.36
USB1-203ENST00000539737 COL8A2P25067 703 aa12.82□□□□□ -0.36
USB1-203ENST00000539737 GSSP48637 474 aa12.82□□□□□ -0.36
USB1-203ENST00000539737 ZNF84P51523 738 aa12.82□□□□□ -0.36
USB1-203ENST00000539737 RPS6KA3P51812 740 aa12.82□□□□□ -0.36
USB1-203ENST00000539737 ZNF133P52736 654 aaPredicted RBP12.82□□□□□ -0.36
USB1-203ENST00000539737 CD47Q08722 323 aa12.82□□□□□ -0.36
USB1-203ENST00000539737 TSPAN31Q12999 210 aa12.82□□□□□ -0.36
USB1-203ENST00000539737 SNTB2Q13425 540 aaKnown RBP12.82□□□□□ -0.36
USB1-203ENST00000539737 ALKBH6Q3KRA9 238 aa12.82□□□□□ -0.36
USB1-203ENST00000539737 NRN1LQ496H8 165 aa12.82□□□□□ -0.36
USB1-203ENST00000539737 ELFN2Q5R3F8 820 aa12.82□□□□□ -0.36
USB1-203ENST00000539737 GPR139Q6DWJ6 353 aa12.82□□□□□ -0.36
USB1-203ENST00000539737 RPL13AP3Q6NVV1 102 aa12.82□□□□□ -0.36
USB1-203ENST00000539737 C1orf229Q6ZS94 237 aaPredicted RBP12.82□□□□□ -0.36
USB1-203ENST00000539737 ASRGL1Q7L266 308 aa12.82□□□□□ -0.36
USB1-203ENST00000539737 ZNF771Q7L3S4 317 aaPredicted RBP12.82□□□□□ -0.36
USB1-203ENST00000539737 MDP1Q86V88 176 aa12.82□□□□□ -0.36
USB1-203ENST00000539737 LRP11Q86VZ4 500 aa12.82□□□□□ -0.36
USB1-203ENST00000539737 ZNF786Q8N393 782 aa12.82□□□□□ -0.36
USB1-203ENST00000539737 ZNF540Q8NDQ6 660 aa12.82□□□□□ -0.36
USB1-203ENST00000539737 NUP37Q8NFH4 326 aa12.82□□□□□ -0.36
USB1-203ENST00000539737 OR9Q2Q8NGE9 314 aa12.82□□□□□ -0.36
USB1-203ENST00000539737 UBASH3BQ8TF42 649 aa12.82□□□□□ -0.36
USB1-203ENST00000539737 ZNF570Q96NI8 536 aa12.82□□□□□ -0.36
USB1-203ENST00000539737 DENND2DQ9H6A0 471 aaPredicted RBP12.82□□□□□ -0.36
USB1-203ENST00000539737 MYEF2Q9P2K5 600 aaKnown RBP12.82□□□□□ -0.36
USB1-203ENST00000539737 ZNF346Q9UL40 294 aaKnown RBP12.82□□□□□ -0.36
USB1-203ENST00000539737 ARHGAP32A7KAX9 2087 aa12.81□□□□□ -0.36
USB1-203ENST00000539737 GNGT2O14610 69 aa12.81□□□□□ -0.36
USB1-203ENST00000539737 PTP4A3O75365 173 aa12.81□□□□□ -0.36
USB1-203ENST00000539737 FARS2O95363 451 aaKnown RBP12.81□□□□□ -0.36
USB1-203ENST00000539737 RAB36O95755 333 aa12.81□□□□□ -0.36
USB1-203ENST00000539737 B4GALT1P15291 398 aa12.81□□□□□ -0.36
USB1-203ENST00000539737 ZNF26P17031 533 aaPredicted RBP12.81□□□□□ -0.36
USB1-203ENST00000539737 SDHAP31040 664 aa12.81□□□□□ -0.36
USB1-203ENST00000539737 SLC6A6P31641 620 aa12.81□□□□□ -0.36
USB1-203ENST00000539737 ALDH3B1P43353 468 aa12.81□□□□□ -0.36
USB1-203ENST00000539737 ERVK-25P63136 954 aa12.81□□□□□ -0.36
USB1-203ENST00000539737 KRR1Q13601 381 aaKnown RBP12.81□□□□□ -0.36
USB1-203ENST00000539737 DAG1Q14118 895 aa12.81□□□□□ -0.36
USB1-203ENST00000539737 MICAQ29983 383 aa12.81□□□□□ -0.36
USB1-203ENST00000539737 GSG1Q2KHT4 349 aa12.81□□□□□ -0.36
USB1-203ENST00000539737 C10orf128Q5T292 105 aa12.81□□□□□ -0.36
USB1-203ENST00000539737 DPY19L2P2Q6ZN68 376 aa12.81□□□□□ -0.36
USB1-203ENST00000539737 ZNF620Q6ZNG0 422 aa12.81□□□□□ -0.36
USB1-203ENST00000539737 ADCK1Q86TW2 530 aa12.81□□□□□ -0.36
USB1-203ENST00000539737 C3orf56Q8N813 242 aa12.81□□□□□ -0.36
USB1-203ENST00000539737 SYT14Q8NB59 555 aa12.81□□□□□ -0.36
USB1-203ENST00000539737 PAPD5Q8NDF8 572 aaKnown RBP12.81□□□□□ -0.36
USB1-203ENST00000539737 HDAC2Q92769 488 aaKnown RBP12.81□□□□□ -0.36
USB1-203ENST00000539737 YIPF5Q969M3 257 aa12.81□□□□□ -0.36
USB1-203ENST00000539737 MCHR2Q969V1 340 aa12.81□□□□□ -0.36
USB1-203ENST00000539737 RBP7Q96R05 134 aa12.81□□□□□ -0.36
USB1-203ENST00000539737 GPA33Q99795 319 aa12.81□□□□□ -0.36
USB1-203ENST00000539737 SYT3Q9BQG1 590 aa12.81□□□□□ -0.36
USB1-203ENST00000539737 MRPL37Q9BZE1 423 aaKnown RBP12.81□□□□□ -0.36
USB1-203ENST00000539737 OR52D1Q9H346 318 aa12.81□□□□□ -0.36
USB1-203ENST00000539737 ZNF442Q9H7R0 627 aa12.81□□□□□ -0.36
USB1-203ENST00000539737 NRIP3Q9NQ35 241 aa12.81□□□□□ -0.36
USB1-203ENST00000539737 TMEM38BQ9NVV0 291 aa12.81□□□□□ -0.36
USB1-203ENST00000539737 HIF1ANQ9NWT6 349 aa12.81□□□□□ -0.36
USB1-203ENST00000539737 VNN3Q9NY84 501 aa12.81□□□□□ -0.36
USB1-203ENST00000539737 ADAM18Q9Y3Q7 739 aa12.81□□□□□ -0.36
USB1-203ENST00000539737 CMAHPQ9Y471 501 aa12.81□□□□□ -0.36
USB1-203ENST00000539737 U3KQV3 271 aa12.81□□□□□ -0.36
USB1-203ENST00000539737 WNK2Q9Y3S1 2297 aa12.8□□□□□ -0.36
USB1-203ENST00000539737 LOC105371242A0A075B767 164 aa12.8□□□□□ -0.36
USB1-203ENST00000539737 TEX13CA0A0J9YWL9 993 aa12.8□□□□□ -0.36
USB1-203ENST00000539737 ARRDC5A6NEK1 342 aa12.8□□□□□ -0.36
USB1-203ENST00000539737 AHCYL1O43865 530 aa12.8□□□□□ -0.36
USB1-203ENST00000539737 MGRN1O60291 552 aa12.8□□□□□ -0.36
USB1-203ENST00000539737 E2F6O75461 281 aa12.8□□□□□ -0.36
USB1-203ENST00000539737 UBL3O95164 117 aa12.8□□□□□ -0.36
USB1-203ENST00000539737 GSTM3P21266 225 aa12.8□□□□□ -0.36
USB1-203ENST00000539737 DVL1P1P54792 670 aaPredicted RBP12.8□□□□□ -0.36
USB1-203ENST00000539737 FXYD6P3P58550 94 aa12.8□□□□□ -0.36
USB1-203ENST00000539737 GALK2Q01415 458 aa12.8□□□□□ -0.36
USB1-203ENST00000539737 THEM4Q5T1C6 240 aa12.8□□□□□ -0.36
USB1-203ENST00000539737 ZNF770Q6IQ21 691 aaPredicted RBP12.8□□□□□ -0.36
USB1-203ENST00000539737 LRFN4Q6PJG9 635 aa12.8□□□□□ -0.36
USB1-203ENST00000539737 FAM122BQ7Z309 247 aa12.8□□□□□ -0.36
USB1-203ENST00000539737 DPPA2Q7Z7J5 298 aa12.8□□□□□ -0.36
USB1-203ENST00000539737 AQP11Q8NBQ7 271 aa12.8□□□□□ -0.36
USB1-203ENST00000539737 OR10G2Q8NGC3 310 aa12.8□□□□□ -0.36
USB1-203ENST00000539737 OR52L1Q8NGH7 329 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms