RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 LEMD1Q68G75 181 aa11.28□□□□□ -0.6
USP3-203ENST00000538686 DEGS2Q6QHC5 323 aa11.28□□□□□ -0.6
USP3-203ENST00000538686 NXPE1Q8N323 547 aa11.28□□□□□ -0.6
USP3-203ENST00000538686 FAM160A2Q8N612 972 aaPredicted RBP11.28□□□□□ -0.6
USP3-203ENST00000538686 SLC35G3Q8N808 338 aa11.28□□□□□ -0.6
USP3-203ENST00000538686 RAB39BQ96DA2 213 aa11.28□□□□□ -0.6
USP3-203ENST00000538686 ARHGDIGQ99819 225 aa11.28□□□□□ -0.6
USP3-203ENST00000538686 SCRT1Q9BWW7 348 aa11.28□□□□□ -0.6
USP3-203ENST00000538686 KATNBL1Q9H079 304 aa11.28□□□□□ -0.6
USP3-203ENST00000538686 ATG10Q9H0Y0 220 aa11.28□□□□□ -0.6
USP3-203ENST00000538686 DPEP2Q9H4A9 486 aa11.28□□□□□ -0.6
USP3-203ENST00000538686 MED20Q9H944 212 aa11.28□□□□□ -0.6
USP3-203ENST00000538686 LUZP4Q9P127 313 aa11.28□□□□□ -0.6
USP3-203ENST00000538686 DKKL1Q9UK85 242 aa11.28□□□□□ -0.6
USP3-203ENST00000538686 ZFP30Q9Y2G7 519 aa11.28□□□□□ -0.6
USP3-203ENST00000538686 PPIL1Q9Y3C6 166 aa11.28□□□□□ -0.6
USP3-203ENST00000538686 KIR2DL5BA0A0G2JN68 375 aa11.27□□□□□ -0.61
USP3-203ENST00000538686 KIR2DL5BA0A0G2JPC4 375 aa11.27□□□□□ -0.61
USP3-203ENST00000538686 BHLHE40O14503 412 aa11.27□□□□□ -0.61
USP3-203ENST00000538686 CYB5BO43169 146 aa11.27□□□□□ -0.61
USP3-203ENST00000538686 EFSO43281 561 aa11.27□□□□□ -0.61
USP3-203ENST00000538686 ZNF354AO60765 605 aaPredicted RBP11.27□□□□□ -0.61
USP3-203ENST00000538686 GPR32O75388 356 aa11.27□□□□□ -0.61
USP3-203ENST00000538686 NXPH2O95156 264 aa11.27□□□□□ -0.61
USP3-203ENST00000538686 CYB5AP00167 134 aa11.27□□□□□ -0.61
USP3-203ENST00000538686 F11P03951 625 aa11.27□□□□□ -0.61
USP3-203ENST00000538686 CSTBP04080 98 aaKnown RBP11.27□□□□□ -0.61
USP3-203ENST00000538686 SLC2A5P22732 501 aa11.27□□□□□ -0.61
USP3-203ENST00000538686 HOXC12P31275 282 aa11.27□□□□□ -0.61
USP3-203ENST00000538686 APLNRP35414 380 aa11.27□□□□□ -0.61
USP3-203ENST00000538686 OR1G1P47890 313 aa11.27□□□□□ -0.61
USP3-203ENST00000538686 TAS2R31P59538 309 aa11.27□□□□□ -0.61
USP3-203ENST00000538686 MIDNQ504T8 468 aa11.27□□□□□ -0.61
USP3-203ENST00000538686 TP53I3Q53FA7 332 aa11.27□□□□□ -0.61
USP3-203ENST00000538686 TMEM268Q5VZI3 342 aa11.27□□□□□ -0.61
USP3-203ENST00000538686 ETFRF1Q6IPR1 90 aa11.27□□□□□ -0.61
USP3-203ENST00000538686 STAC2Q6ZMT1 411 aa11.27□□□□□ -0.61
USP3-203ENST00000538686 SSX7Q7RTT5 188 aa11.27□□□□□ -0.61
USP3-203ENST00000538686 P4HA3Q7Z4N8 544 aa11.27□□□□□ -0.61
USP3-203ENST00000538686 NRMQ8IXM6 262 aa11.27□□□□□ -0.61
USP3-203ENST00000538686 C9orf40Q8IXQ3 194 aa11.27□□□□□ -0.61
USP3-203ENST00000538686 KIR2DL5AQ8N109 375 aa11.27□□□□□ -0.61
USP3-203ENST00000538686 SUMF2Q8NBJ7 301 aa11.27□□□□□ -0.61
USP3-203ENST00000538686 FBXO32Q969P5 355 aa11.27□□□□□ -0.61
USP3-203ENST00000538686 FAM210BQ96KR6 192 aa11.27□□□□□ -0.61
USP3-203ENST00000538686 INTS14Q96SY0 518 aa11.27□□□□□ -0.61
USP3-203ENST00000538686 GPR174Q9BXC1 333 aa11.27□□□□□ -0.61
USP3-203ENST00000538686 OR52D1Q9H346 318 aa11.27□□□□□ -0.61
USP3-203ENST00000538686 TCEAL2Q9H3H9 227 aaPredicted RBP11.27□□□□□ -0.61
USP3-203ENST00000538686 LPAR2Q9HBW0 351 aa11.27□□□□□ -0.61
USP3-203ENST00000538686 CBLN4Q9NTU7 201 aa11.27□□□□□ -0.61
USP3-203ENST00000538686 SH2B3Q9UQQ2 575 aa11.27□□□□□ -0.61
USP3-203ENST00000538686 FRMPD3Q5JV73 1810 aa11.27□□□□□ -0.61
USP3-203ENST00000538686 TRAV18A0A075B6X5 111 aa11.26□□□□□ -0.61
USP3-203ENST00000538686 A0A1W2PQH9 124 aa11.26□□□□□ -0.61
USP3-203ENST00000538686 K7EP13 123 aa11.26□□□□□ -0.61
USP3-203ENST00000538686 TCF21O43680 179 aa11.26□□□□□ -0.61
USP3-203ENST00000538686 RCBTB2O95199 551 aa11.26□□□□□ -0.61
USP3-203ENST00000538686 EPPINO95925 133 aa11.26□□□□□ -0.61
USP3-203ENST00000538686 CXCL1P09341 107 aa11.26□□□□□ -0.61
USP3-203ENST00000538686 ST6GAL1P15907 406 aa11.26□□□□□ -0.61
USP3-203ENST00000538686 KHKP50053 298 aa11.26□□□□□ -0.61
USP3-203ENST00000538686 NPY4RP50391 375 aa11.26□□□□□ -0.61
USP3-203ENST00000538686 ZNF280AP59817 542 aaPredicted RBP11.26□□□□□ -0.61
USP3-203ENST00000538686 PPP1R1AQ13522 171 aa11.26□□□□□ -0.61
USP3-203ENST00000538686 TRA2AQ13595 282 aaKnown RBP eCLIP11.26□□□□□ -0.61
USP3-203ENST00000538686 AMZ1Q400G9 498 aa11.26□□□□□ -0.61
USP3-203ENST00000538686 NCR3LG1Q68D85 454 aa11.26□□□□□ -0.61
USP3-203ENST00000538686 OPN5Q6U736 354 aa11.26□□□□□ -0.61
USP3-203ENST00000538686 BTNL3Q6UXE8 466 aa11.26□□□□□ -0.61
USP3-203ENST00000538686 C1orf87Q8N0U7 546 aa11.26□□□□□ -0.61
USP3-203ENST00000538686 OR5T1Q8NG75 326 aa11.26□□□□□ -0.61
USP3-203ENST00000538686 OR1N1Q8NGS0 311 aa11.26□□□□□ -0.61
USP3-203ENST00000538686 GPR148Q8TDV2 347 aa11.26□□□□□ -0.61
USP3-203ENST00000538686 SMARCD2Q92925 531 aa11.26□□□□□ -0.61
USP3-203ENST00000538686 DVL3Q92997 716 aaPredicted RBP11.26□□□□□ -0.61
USP3-203ENST00000538686 SLC35G5Q96KT7 338 aa11.26□□□□□ -0.61
USP3-203ENST00000538686 LGR4Q9BXB1 951 aa11.26□□□□□ -0.61
USP3-203ENST00000538686 KLHL28Q9NXS3 571 aa11.26□□□□□ -0.61
USP3-203ENST00000538686 VAX2Q9UIW0 290 aa11.26□□□□□ -0.61
USP3-203ENST00000538686 HELZP42694 1942 aaKnown RBP11.26□□□□□ -0.61
USP3-203ENST00000538686 ZNF736B4DX44 427 aaPredicted RBP11.26□□□□□ -0.61
USP3-203ENST00000538686 PPP5D1E7EU14 171 aa11.26□□□□□ -0.61
USP3-203ENST00000538686 AMBPP02760 352 aa11.26□□□□□ -0.61
USP3-203ENST00000538686 ASGR1P07306 291 aa11.26□□□□□ -0.61
USP3-203ENST00000538686 ZNF735P0CB33 412 aa11.26□□□□□ -0.61
USP3-203ENST00000538686 TMIGD3P0DMS9 266 aaPredicted RBP11.26□□□□□ -0.61
USP3-203ENST00000538686 CD37P11049 281 aa11.26□□□□□ -0.61
USP3-203ENST00000538686 FOLR1P15328 257 aa11.26□□□□□ -0.61
USP3-203ENST00000538686 CCKARP32238 428 aa11.26□□□□□ -0.61
USP3-203ENST00000538686 TAGLN2P37802 199 aaKnown RBP11.26□□□□□ -0.61
USP3-203ENST00000538686 PAX5Q02548 391 aa11.26□□□□□ -0.61
USP3-203ENST00000538686 GUCA2AQ02747 115 aa11.26□□□□□ -0.61
USP3-203ENST00000538686 COA6Q5JTJ3 125 aaKnown RBP11.26□□□□□ -0.61
USP3-203ENST00000538686 TANGO2Q6ICL3 276 aa11.26□□□□□ -0.61
USP3-203ENST00000538686 FBXO46Q6PJ61 603 aaPredicted RBP11.26□□□□□ -0.61
USP3-203ENST00000538686 CD300LGQ6UXG3 332 aa11.26□□□□□ -0.61
USP3-203ENST00000538686 TMEM150AQ86TG1 271 aa11.26□□□□□ -0.61
USP3-203ENST00000538686 METTL21AQ8WXB1 218 aa11.26□□□□□ -0.61
USP3-203ENST00000538686 EXTL1Q92935 676 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms