RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 CCDC54Q8NEL0 328 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 NIPSNAP3BQ9BS92 247 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 C16orf70Q9BSU1 422 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 TMEM100Q9NV29 134 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 NTMQ9P121 344 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 GHRLQ9UBU3 117 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 WASF3Q9UPY6 502 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 MRPS17Q9Y2R5 130 aaKnown RBP4.94□□□□□ -1.62
PTPRD-213ENST00000537002 OR5H14A6NHG9 310 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 RNASEK-C17orf49H0YIS7 233 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 HCRTR2O43614 444 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 AIFM1O95831 613 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 HPXP02790 462 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 RNH1P13489 461 aaKnown RBP4.94□□□□□ -1.62
PTPRD-213ENST00000537002 CYBAP13498 195 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 DAOP14920 347 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 CD70P32970 193 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 RPL23AP62750 156 aaKnown RBP4.94□□□□□ -1.62
PTPRD-213ENST00000537002 NHLH2Q02577 135 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 GDF6Q6KF10 455 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-213ENST00000537002 SLC35D2Q76EJ3 337 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 NECAP1Q8NC96 275 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 PFN4Q8NHR9 129 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 STT3BQ8TCJ2 826 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 FAM3DQ96BQ1 224 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 CWH43Q9H720 699 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 LMAN1LQ9HAT1 526 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 ELOVL3Q9HB03 270 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 SIRT7Q9NRC8 400 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 MTFP1Q9UDX5 166 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 hCG_1809904A0A1W2PP81 198 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 A0A1W2PR64 198 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 A0A1W2PRV1 198 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 FITM1A5D6W6 292 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 MEGF11A6BM72 1044 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 TLX3O43711 291 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-213ENST00000537002 NXPH3O95157 252 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 OR2T7P0C7T2 308 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 FOLR1P15328 257 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 RAB5AP20339 215 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 DDTP30046 118 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 SPINT3P49223 89 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 MRPS34P82930 218 aaKnown RBP4.94□□□□□ -1.62
PTPRD-213ENST00000537002 CCL14Q16627 93 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 MDGA2Q7Z553 956 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 CPEB2Q7Z5Q1 589 aaKnown RBP4.94□□□□□ -1.62
PTPRD-213ENST00000537002 CHST14Q8NCH0 376 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 OR2T27Q8NH04 317 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 OR5R1Q8NH85 324 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 NUDCD2Q8WVJ2 157 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 R3HDM4Q96D70 268 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 PGAM5Q96HS1 289 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 FAM71F1Q96KD3 344 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-213ENST00000537002 TGM7Q96PF1 710 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 HIST1H2AAQ96QV6 131 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 COPS7AQ9UBW8 275 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 OR1A2Q9Y585 309 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 SERPINA7P05543 415 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 HSD11B2P80365 405 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 ZNF750Q32MQ0 723 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 NPAS4Q8IUM7 802 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 SIRT6Q8N6T7 355 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 OR2G2Q8NGZ5 317 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 SENP5Q96HI0 755 aaPredicted RBP4.93□□□□□ -1.62
PTPRD-213ENST00000537002 TXN2Q99757 166 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 NRIP2Q9BQI9 281 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 FAM103A1Q9BTL3 118 aaKnown RBP4.93□□□□□ -1.62
PTPRD-213ENST00000537002 G6PC3Q9BUM1 346 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 PLA2G12AQ9BZM1 189 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 HINT3Q9NQE9 182 aaKnown RBP4.93□□□□□ -1.62
PTPRD-213ENST00000537002 SIDT1Q9NXL6 827 aaKnown RBP4.93□□□□□ -1.62
PTPRD-213ENST00000537002 LPAR3Q9UBY5 353 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 IFITM5A6NNB3 132 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 CTNSO60931 367 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 P2RY4P51582 365 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 ZNF41P51814 821 aaPredicted RBP4.93□□□□□ -1.62
PTPRD-213ENST00000537002 EMP2P54851 167 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 MLF1P58340 268 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 MLC1Q15049 377 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 CST9LP1Q5W188 147 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 SLC39A5Q6ZMH5 540 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 FAM24BQ8N5W8 94 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 ZNF610Q8N9Z0 462 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 ZNF480Q8WV37 535 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 WDR34Q96EX3 536 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 RHOVQ96L33 236 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 OR8D2Q9GZM6 311 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 PARP11Q9NR21 331 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 SLC22A7Q9Y694 548 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 PRPS1P60891 318 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 TOMM34Q15785 309 aaPredicted RBP4.93□□□□□ -1.62
PTPRD-213ENST00000537002 NSUN5P2Q63ZY6 315 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 NIPAL3Q6P499 406 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 TIPARPQ7Z3E1 657 aaKnown RBP4.93□□□□□ -1.62
PTPRD-213ENST00000537002 HSD11B1LQ7Z5J1 315 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 GPR61Q9BZJ8 451 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 RCC2Q9P258 522 aaKnown RBP4.93□□□□□ -1.62
PTPRD-213ENST00000537002 GDF2Q9UK05 429 aaPredicted RBP4.93□□□□□ -1.62
PTPRD-213ENST00000537002 HHLA1C9JL84 531 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 CTSLP07711 333 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms