RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 ANKRD49Q8WVL7 239 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 GTF3AQ92664 365 aaKnown RBP4.33□□□□□ -1.72
CLIP1-207ENST00000536634 TMBIM1Q969X1 311 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 WDR34Q96EX3 536 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 NAP1L3Q99457 506 aaPredicted RBP4.33□□□□□ -1.72
CLIP1-207ENST00000536634 DCTN5Q9BTE1 182 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 FRMD8P1Q9BZ68 369 aaPredicted RBP4.33□□□□□ -1.72
CLIP1-207ENST00000536634 PRRG4Q9BZD6 226 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 DSN1Q9H410 356 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 GRPEL1Q9HAV7 217 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 CBLN4Q9NTU7 201 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 FAIMQ9NVQ4 179 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 ARMCX1Q9P291 453 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 PLLPQ9Y342 182 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 MRPS18CQ9Y3D5 142 aaKnown RBP4.33□□□□□ -1.72
CLIP1-207ENST00000536634 OARD1Q9Y530 152 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 WNK2Q9Y3S1 2297 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 SACSQ9NZJ4 4579 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 DYNC2H1Q8NCM8 4307 aaKnown RBP4.32□□□□□ -1.72
CLIP1-207ENST00000536634 A0A087WUV0 522 aaPredicted RBP4.32□□□□□ -1.72
CLIP1-207ENST00000536634 SYCE3A1L190 88 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 OR6C70A6NIJ9 312 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 MPTX1A8MV57 137 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 KRTAP9-6A8MVA2 160 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 MIF4GDA9UHW6 222 aaKnown RBP4.32□□□□□ -1.72
CLIP1-207ENST00000536634 GOLGA6L19H0YKK7 550 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 H7C417 338 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 ACOX3O15254 700 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 TSPAN2O60636 221 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 BANF1O75531 89 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 MBD3O95983 291 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 OPN1LWP04000 364 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 GBAP04062 536 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 TPM1P09493 284 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 NT5EP21589 574 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 IL32P24001 234 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 EDNRAP25101 427 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 TLX1P31314 330 aaPredicted RBP4.32□□□□□ -1.72
CLIP1-207ENST00000536634 SRP14P37108 136 aaKnown RBP4.32□□□□□ -1.72
CLIP1-207ENST00000536634 CAPZA2P47755 286 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 HNMTP50135 292 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 EFNA4P52798 201 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 CTBP2P56545 445 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 DSCR4P56555 118 aaPredicted RBP4.32□□□□□ -1.72
CLIP1-207ENST00000536634 CYCSP99999 105 aaKnown RBP4.32□□□□□ -1.72
CLIP1-207ENST00000536634 CALCOCO2Q13137 446 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 CHIT1Q13231 466 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 DDX39BQ13838 428 aaKnown RBP4.32□□□□□ -1.72
CLIP1-207ENST00000536634 SPA17Q15506 151 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 TGFBIQ15582 683 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 STK11Q15831 433 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 KHDRBS2Q5VWX1 349 aaKnown RBP4.32□□□□□ -1.72
CLIP1-207ENST00000536634 ARMC3Q5W041 872 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 ZNF343Q6P1L6 599 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 TFAP2EQ6VUC0 442 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 NPSR1Q6W5P4 371 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 NUFIP2Q7Z417 695 aaKnown RBP4.32□□□□□ -1.72
CLIP1-207ENST00000536634 GALNT10Q86SR1 603 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 LMNTD2Q8IXW0 634 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 CCDC170Q8IYT3 715 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 MUC15Q8N387 334 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 OR7G3Q8NG95 312 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 OR7G1Q8NGA0 311 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 OR7A2PQ8NGA2 310 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 OR4K17Q8NGC6 315 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 OR10D3Q8NH80 312 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 ANKRD7Q92527 254 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 PDLIM5Q96HC4 596 aaKnown RBP4.32□□□□□ -1.72
CLIP1-207ENST00000536634 FAM218AQ96MZ4 157 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 COL21A1Q96P44 957 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 CENPOQ9BU64 300 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 EFCAB11Q9BUY7 163 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 POTEKPQ9BYX7 375 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 BPESC1Q9GZL8 116 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 STMN4Q9H169 189 aaPredicted RBP4.32□□□□□ -1.72
CLIP1-207ENST00000536634 ANKRA2Q9H9E1 313 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 DNAJC4Q9NNZ3 241 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 RPS10P5Q9NQ39 176 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 DNAJC11Q9NVH1 559 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 MS4A12Q9NXJ0 267 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 MAT2BQ9NZL9 334 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 MED11Q9P086 117 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 PHF11Q9UIL8 331 aa4.32□□□□□ -1.72
CLIP1-207ENST00000536634 GOLGA8QA0A0J9YX86 632 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 MAGEB16A2A368 324 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 GOLGA8OA6NCC3 632 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 GOLGA8NF8WBI6 632 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 GOLGA8RI6L899 631 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 SCO2O43819 266 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 IDH3BO43837 385 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 CXCL13O43927 109 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 REM1O75628 298 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 LYZL6O75951 148 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 CLDN9O95484 217 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 ATP1B1P05026 303 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 TPM3P06753 285 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 CSF3P09919 207 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 FAM58BPP0C7Q3 252 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 CT45A8P0DMV1 189 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 CT45A9P0DMV2 189 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms