RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 PCGF2P35227 344 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 MNDAP41218 407 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 ELLP55199 621 aaPredicted RBP3.37□□□□□ -1.87
MCF2-210ENST00000536274 RAP1BP61224 184 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 PITPNAQ00169 270 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 TLE1Q04724 770 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 ZNF616Q08AN1 781 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 RAB40BQ12829 278 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 TSTA3Q13630 321 aaPredicted RBP3.37□□□□□ -1.87
MCF2-210ENST00000536274 VEZF1Q14119 521 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 UBE2V2Q15819 145 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 LBHQ53QV2 105 aaPredicted RBP3.37□□□□□ -1.87
MCF2-210ENST00000536274 XKR4Q5GH76 650 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 FAM78AQ5JUQ0 283 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 PRSS55Q6UWB4 352 aaPredicted RBP3.37□□□□□ -1.87
MCF2-210ENST00000536274 SLC36A4Q6YBV0 504 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 Q6ZRG5 221 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 ACOT7LQ6ZUV0 252 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 TMPRSS11FQ6ZWK6 438 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 CXXC5Q7LFL8 322 aaKnown RBP3.37□□□□□ -1.87
MCF2-210ENST00000536274 TAS1R1Q7RTX1 841 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 BIVMQ86UB2 503 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 FAM185AQ8N0U4 392 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 ZSCAN4Q8NAM6 433 aaPredicted RBP3.37□□□□□ -1.87
MCF2-210ENST00000536274 INO80EQ8NBZ0 244 aaPredicted RBP3.37□□□□□ -1.87
MCF2-210ENST00000536274 NUDT10Q8NFP7 164 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 OR4K14Q8NGD5 310 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 OR13C9Q8NGT0 318 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 SCAMP5Q8TAC9 235 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 ZNF461Q8TAF7 563 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 GEMIN6Q8WXD5 167 aaKnown RBP3.37□□□□□ -1.87
MCF2-210ENST00000536274 SMPDL3AQ92484 453 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 RAB24Q969Q5 203 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 TM4SF18Q96CE8 201 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 GALNT14Q96FL9 552 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 WRAP53Q9BUR4 548 aaKnown RBP3.37□□□□□ -1.87
MCF2-210ENST00000536274 CIPCQ9C0C6 399 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 UBQLN3Q9H347 655 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 FGF20Q9NP95 211 aaPredicted RBP3.37□□□□□ -1.87
MCF2-210ENST00000536274 HINT3Q9NQE9 182 aaKnown RBP3.37□□□□□ -1.87
MCF2-210ENST00000536274 OR5AC2Q9NZP5 309 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 COMMD9Q9P000 198 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 GSKIPQ9P0R6 139 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 STEAP1Q9UHE8 339 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 RAB22AQ9UL26 194 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 GPR34Q9UPC5 381 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 FOXJ3Q9UPW0 622 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 MRPS2Q9Y399 296 aaKnown RBP3.37□□□□□ -1.87
MCF2-210ENST00000536274 ZFP37Q9Y6Q3 630 aaPredicted RBP3.37□□□□□ -1.87
MCF2-210ENST00000536274 TBC1D3DA0A087WVF3 549 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 TBC1D3IA0A087WXS9 549 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 TBC1D3EA0A087X179 549 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 TBC1D3KA0A087X1G2 549 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 TRBV11-1A0A0K0K1C0 115 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 DAPL1A0PJW8 107 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 TBC1D3BA6NDS4 549 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 C5orf51A6NDU8 294 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 SNRPGP15A8MWD9 76 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 TBC1D3LB9A6J9 549 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 H0YL77 283 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 GABRDO14764 452 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 ZNF264O43296 627 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 FCMRO60667 390 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 PIAS2O75928 621 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 IGSF6O95976 241 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 ADAP00813 363 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 CD5P06127 495 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 CTSBP07858 339 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 CHRM4P08173 479 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 HMBSP08397 361 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 FCGR3AP08637 254 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 TBC1D3HP0C7X1 549 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 LINC00614P0C842 121 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 ZNF28P17035 718 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 FGF7P21781 194 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 BRS3P32247 399 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 CEACAM6P40199 344 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 RGRP47804 291 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 SOX2P48431 317 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 DGKGP49619 791 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 FGF8P55075 233 aaPredicted RBP3.36□□□□□ -1.87
MCF2-210ENST00000536274 TAS2R41P59536 307 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 RIPPLY1Q0D2K3 151 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 HAGHQ16775 308 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 LY6KQ17RY6 165 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 PIP5KL1Q5T9C9 394 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 ATPAF1Q5TC12 328 aaPredicted RBP3.36□□□□□ -1.87
MCF2-210ENST00000536274 TBC1D3GQ6DHY5 549 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 TBC1D3CQ6IPX1 549 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 ULK3Q6PHR2 472 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 TMEM205Q6UW68 189 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 CXCL17Q6UXB2 119 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 SLC24A5Q71RS6 500 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 CAMKMTQ7Z624 323 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 CD163Q86VB7 1156 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 TBC1D3Q8IZP1 549 aaPredicted RBP3.36□□□□□ -1.87
MCF2-210ENST00000536274 C1orf52Q8N6N3 182 aaKnown RBP3.36□□□□□ -1.87
MCF2-210ENST00000536274 OR51F2Q8NH61 342 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 OR14C36Q8NHC7 312 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 MYEOVQ96EZ4 313 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms