RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 QDPRP09417 244 aa6.79□□□□□ -1.32
CLIP1-206ENST00000535290 FBP1P09467 338 aa6.79□□□□□ -1.32
CLIP1-206ENST00000535290 GCAP28676 217 aa6.79□□□□□ -1.32
CLIP1-206ENST00000535290 PSMB10P40306 273 aa6.79□□□□□ -1.32
CLIP1-206ENST00000535290 PMELP40967 661 aa6.79□□□□□ -1.32
CLIP1-206ENST00000535290 CRATP43155 626 aa6.79□□□□□ -1.32
CLIP1-206ENST00000535290 GDI2P50395 445 aaKnown RBP6.79□□□□□ -1.32
CLIP1-206ENST00000535290 CLDN8P56748 225 aa6.79□□□□□ -1.32
CLIP1-206ENST00000535290 EGFEM1PQ0D2K5 195 aa6.79□□□□□ -1.32
CLIP1-206ENST00000535290 LIN52Q52LA3 116 aa6.79□□□□□ -1.32
CLIP1-206ENST00000535290 NKAPLQ5M9Q1 402 aa6.79□□□□□ -1.32
CLIP1-206ENST00000535290 LINC00528Q8N1L1 170 aa6.79□□□□□ -1.32
CLIP1-206ENST00000535290 SCAIQ8N9R8 606 aa6.79□□□□□ -1.32
CLIP1-206ENST00000535290 SPERTQ8NA61 448 aa6.79□□□□□ -1.32
CLIP1-206ENST00000535290 FNDC5Q8NAU1 212 aa6.79□□□□□ -1.32
CLIP1-206ENST00000535290 PAPD5Q8NDF8 572 aaKnown RBP6.79□□□□□ -1.32
CLIP1-206ENST00000535290 C19orf18Q8NEA5 215 aa6.79□□□□□ -1.32
CLIP1-206ENST00000535290 OR4C13Q8NGP0 309 aa6.79□□□□□ -1.32
CLIP1-206ENST00000535290 OR6X1Q8NH79 312 aa6.79□□□□□ -1.32
CLIP1-206ENST00000535290 OR2T6Q8NHC8 308 aa6.79□□□□□ -1.32
CLIP1-206ENST00000535290 AKR7LQ8NHP1 331 aa6.79□□□□□ -1.32
CLIP1-206ENST00000535290 VANGL1Q8TAA9 524 aaPredicted RBP6.79□□□□□ -1.32
CLIP1-206ENST00000535290 TEX37Q96LM6 180 aa6.79□□□□□ -1.32
CLIP1-206ENST00000535290 SLC35A5Q9BS91 424 aa6.79□□□□□ -1.32
CLIP1-206ENST00000535290 POFUT1Q9H488 388 aa6.79□□□□□ -1.32
CLIP1-206ENST00000535290 MAN2C1Q9NTJ4 1040 aa6.79□□□□□ -1.32
CLIP1-206ENST00000535290 ZNF443Q9Y2A4 671 aaPredicted RBP6.79□□□□□ -1.32
CLIP1-206ENST00000535290 PCLOQ9Y6V0 5065 aa6.79□□□□□ -1.32
CLIP1-206ENST00000535290 PRSS51A0A1B0GVH4 220 aa6.78□□□□□ -1.32
CLIP1-206ENST00000535290 A0A1B0GWA3 101 aa6.78□□□□□ -1.32
CLIP1-206ENST00000535290 MEGF11A6BM72 1044 aa6.78□□□□□ -1.32
CLIP1-206ENST00000535290 C11orf98E9PRG8 122 aa6.78□□□□□ -1.32
CLIP1-206ENST00000535290 IFNL4K9M1U5 179 aa6.78□□□□□ -1.32
CLIP1-206ENST00000535290 SURF4O15260 269 aa6.78□□□□□ -1.32
CLIP1-206ENST00000535290 GLRA3O75311 464 aa6.78□□□□□ -1.32
CLIP1-206ENST00000535290 FSTL3O95633 263 aa6.78□□□□□ -1.32
CLIP1-206ENST00000535290 CHRNGP07510 517 aa6.78□□□□□ -1.32
CLIP1-206ENST00000535290 ZNF32P17041 273 aa6.78□□□□□ -1.32
CLIP1-206ENST00000535290 ERFP50548 548 aa6.78□□□□□ -1.32
CLIP1-206ENST00000535290 HOXA4Q00056 320 aaPredicted RBP6.78□□□□□ -1.32
CLIP1-206ENST00000535290 PSG4Q00888 419 aa6.78□□□□□ -1.32
CLIP1-206ENST00000535290 RNF220Q5VTB9 566 aa6.78□□□□□ -1.32
CLIP1-206ENST00000535290 UNQ6126/PRO20091Q6UXV3 157 aa6.78□□□□□ -1.32
CLIP1-206ENST00000535290 DCDC5Q6ZRR9 648 aa6.78□□□□□ -1.32
CLIP1-206ENST00000535290 SLC35D2Q76EJ3 337 aa6.78□□□□□ -1.32
CLIP1-206ENST00000535290 ZER1Q7Z7L7 766 aa6.78□□□□□ -1.32
CLIP1-206ENST00000535290 LRRC34Q8IZ02 419 aa6.78□□□□□ -1.32
CLIP1-206ENST00000535290 ATG16L2Q8NAA4 619 aa6.78□□□□□ -1.32
CLIP1-206ENST00000535290 OR8J2Q8NGG1 315 aa6.78□□□□□ -1.32
CLIP1-206ENST00000535290 OR5R1Q8NH85 324 aa6.78□□□□□ -1.32
CLIP1-206ENST00000535290 ZNF566Q969W8 418 aa6.78□□□□□ -1.32
CLIP1-206ENST00000535290 MAP6Q96JE9 813 aa6.78□□□□□ -1.32
CLIP1-206ENST00000535290 MEGF10Q96KG7 1140 aa6.78□□□□□ -1.32
CLIP1-206ENST00000535290 TECTBQ96PL2 329 aa6.78□□□□□ -1.32
CLIP1-206ENST00000535290 ZNF607Q96SK3 696 aa6.78□□□□□ -1.32
CLIP1-206ENST00000535290 ASPNQ9BXN1 380 aa6.78□□□□□ -1.32
CLIP1-206ENST00000535290 RAB17Q9H0T7 212 aa6.78□□□□□ -1.32
CLIP1-206ENST00000535290 MRPL39Q9NYK5 338 aaKnown RBP6.78□□□□□ -1.32
CLIP1-206ENST00000535290 CTSZQ9UBR2 303 aa6.78□□□□□ -1.32
CLIP1-206ENST00000535290 A0A1W2PRD5 423 aa6.77□□□□□ -1.33
CLIP1-206ENST00000535290 A0A1W2PRF3 423 aa6.77□□□□□ -1.33
CLIP1-206ENST00000535290 A0A1W2PRM7 423 aa6.77□□□□□ -1.33
CLIP1-206ENST00000535290 PLIN3O60664 434 aa6.77□□□□□ -1.33
CLIP1-206ENST00000535290 FGF4P08620 206 aa6.77□□□□□ -1.33
CLIP1-206ENST00000535290 PGA4P0DJD7 388 aa6.77□□□□□ -1.33
CLIP1-206ENST00000535290 PGA3P0DJD8 388 aa6.77□□□□□ -1.33
CLIP1-206ENST00000535290 CPA3P15088 417 aa6.77□□□□□ -1.33
CLIP1-206ENST00000535290 KITLGP21583 273 aa6.77□□□□□ -1.33
CLIP1-206ENST00000535290 HTR2AP28223 471 aa6.77□□□□□ -1.33
CLIP1-206ENST00000535290 CDAP32320 146 aa6.77□□□□□ -1.33
CLIP1-206ENST00000535290 ANXA11P50995 505 aaKnown RBP6.77□□□□□ -1.33
CLIP1-206ENST00000535290 SLC7A5Q01650 507 aa6.77□□□□□ -1.33
CLIP1-206ENST00000535290 HABP2Q14520 560 aaPredicted RBP6.77□□□□□ -1.33
CLIP1-206ENST00000535290 MELKQ14680 651 aa6.77□□□□□ -1.33
CLIP1-206ENST00000535290 CASP8Q14790 479 aa6.77□□□□□ -1.33
CLIP1-206ENST00000535290 TAF11Q15544 211 aa6.77□□□□□ -1.33
CLIP1-206ENST00000535290 LY6EQ16553 131 aa6.77□□□□□ -1.33
CLIP1-206ENST00000535290 RPS26P11Q5JNZ5 115 aaPredicted RBP6.77□□□□□ -1.33
CLIP1-206ENST00000535290 CD276Q5ZPR3 534 aa6.77□□□□□ -1.33
CLIP1-206ENST00000535290 C5orf46Q6UWT4 87 aa6.77□□□□□ -1.33
CLIP1-206ENST00000535290 VMO1Q7Z5L0 202 aa6.77□□□□□ -1.33
CLIP1-206ENST00000535290 MOGAT3Q86VF5 341 aa6.77□□□□□ -1.33
CLIP1-206ENST00000535290 PNLDC1Q8NA58 520 aaKnown RBP6.77□□□□□ -1.33
CLIP1-206ENST00000535290 OR10AD1Q8NGE0 317 aa6.77□□□□□ -1.33
CLIP1-206ENST00000535290 OR6S1Q8NH40 331 aa6.77□□□□□ -1.33
CLIP1-206ENST00000535290 AGR3Q8TD06 166 aa6.77□□□□□ -1.33
CLIP1-206ENST00000535290 ACMSDQ8TDX5 336 aa6.77□□□□□ -1.33
CLIP1-206ENST00000535290 WIPF2Q8TF74 440 aaPredicted RBP6.77□□□□□ -1.33
CLIP1-206ENST00000535290 MCHR2Q969V1 340 aa6.77□□□□□ -1.33
CLIP1-206ENST00000535290 CMBLQ96DG6 245 aa6.77□□□□□ -1.33
CLIP1-206ENST00000535290 SLC25A44Q96H78 314 aaPredicted RBP6.77□□□□□ -1.33
CLIP1-206ENST00000535290 CLPTM1LQ96KA5 538 aa6.77□□□□□ -1.33
CLIP1-206ENST00000535290 C4orf45Q96LM5 186 aa6.77□□□□□ -1.33
CLIP1-206ENST00000535290 MAGEB18Q96M61 343 aa6.77□□□□□ -1.33
CLIP1-206ENST00000535290 ZNF347Q96SE7 839 aa6.77□□□□□ -1.33
CLIP1-206ENST00000535290 SPATA9Q9BWV2 254 aa6.77□□□□□ -1.33
CLIP1-206ENST00000535290 C12orf10Q9HB07 376 aa6.77□□□□□ -1.33
CLIP1-206ENST00000535290 SMURF1Q9HCE7 757 aa6.77□□□□□ -1.33
CLIP1-206ENST00000535290 CCNB1IP1Q9NPC3 277 aa6.77□□□□□ -1.33
CLIP1-206ENST00000535290 SERTAD4Q9NUC0 356 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms