RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 GPX2P18283 190 aa7.46□□□□□ -1.22
SFSWAP-202ENST00000535202 GRPRP30550 384 aa7.46□□□□□ -1.22
SFSWAP-202ENST00000535202 SLC15A1P46059 708 aa7.46□□□□□ -1.22
SFSWAP-202ENST00000535202 UBE2NP61088 152 aaKnown RBP7.46□□□□□ -1.22
SFSWAP-202ENST00000535202 SCRN3Q0VDG4 424 aa7.46□□□□□ -1.22
SFSWAP-202ENST00000535202 C1DQ13901 141 aaKnown RBP7.46□□□□□ -1.22
SFSWAP-202ENST00000535202 MFSD13AQ14CX5 517 aa7.46□□□□□ -1.22
SFSWAP-202ENST00000535202 CYP51A1Q16850 503 aa7.46□□□□□ -1.22
SFSWAP-202ENST00000535202 TBRG1Q3YBR2 411 aa7.46□□□□□ -1.22
SFSWAP-202ENST00000535202 RUNDC3AQ59EK9 446 aa7.46□□□□□ -1.22
SFSWAP-202ENST00000535202 TOR2AQ5JU69 321 aa7.46□□□□□ -1.22
SFSWAP-202ENST00000535202 SPANXN2Q5MJ10 180 aa7.46□□□□□ -1.22
SFSWAP-202ENST00000535202 CLVS2Q5SYC1 327 aa7.46□□□□□ -1.22
SFSWAP-202ENST00000535202 FAM69AQ5T7M9 428 aa7.46□□□□□ -1.22
SFSWAP-202ENST00000535202 ZNF691Q5VV52 312 aa7.46□□□□□ -1.22
SFSWAP-202ENST00000535202 C11orf71Q6IPW1 123 aa7.46□□□□□ -1.22
SFSWAP-202ENST00000535202 DLEU7Q6UYE1 221 aa7.46□□□□□ -1.22
SFSWAP-202ENST00000535202 CYP2R1Q6VVX0 501 aa7.46□□□□□ -1.22
SFSWAP-202ENST00000535202 LINGO2Q7L985 606 aa7.46□□□□□ -1.22
SFSWAP-202ENST00000535202 LINC00518Q8N0U6 118 aa7.46□□□□□ -1.22
SFSWAP-202ENST00000535202 FAM156AQ8NDB6 213 aa7.46□□□□□ -1.22
SFSWAP-202ENST00000535202 OR1K1Q8NGR3 316 aa7.46□□□□□ -1.22
SFSWAP-202ENST00000535202 ZNF417Q8TAU3 575 aa7.46□□□□□ -1.22
SFSWAP-202ENST00000535202 MAGEE2Q8TD90 523 aaPredicted RBP7.46□□□□□ -1.22
SFSWAP-202ENST00000535202 SNAPC3Q92966 411 aa7.46□□□□□ -1.22
SFSWAP-202ENST00000535202 OXGR1Q96P68 337 aa7.46□□□□□ -1.22
SFSWAP-202ENST00000535202 ZNF607Q96SK3 696 aa7.46□□□□□ -1.22
SFSWAP-202ENST00000535202 ZNF587Q96SQ5 575 aaPredicted RBP7.46□□□□□ -1.22
SFSWAP-202ENST00000535202 RBM4BQ9BQ04 359 aaKnown RBP7.46□□□□□ -1.22
SFSWAP-202ENST00000535202 RBM4Q9BWF3 364 aaKnown RBP7.46□□□□□ -1.22
SFSWAP-202ENST00000535202 NUAK2Q9H093 628 aa7.46□□□□□ -1.22
SFSWAP-202ENST00000535202 TMEM27Q9HBJ8 222 aa7.46□□□□□ -1.22
SFSWAP-202ENST00000535202 POLE4Q9NR33 117 aa7.46□□□□□ -1.22
SFSWAP-202ENST00000535202 FAM118AQ9NWS6 357 aa7.46□□□□□ -1.22
SFSWAP-202ENST00000535202 SCN3BQ9NY72 215 aa7.46□□□□□ -1.22
SFSWAP-202ENST00000535202 KIF17Q9P2E2 1029 aa7.46□□□□□ -1.22
SFSWAP-202ENST00000535202 AURKCQ9UQB9 309 aa7.46□□□□□ -1.22
SFSWAP-202ENST00000535202 LYVE1Q9Y5Y7 322 aa7.46□□□□□ -1.22
SFSWAP-202ENST00000535202 IGKV1D-42A0A075B6H8 117 aa7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 TRAV36DV7A0A075B6V5 113 aa7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 A0A096LPE4 126 aa7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 IGHV1-18A0A0C4DH31 117 aa7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 A0A1W2PPZ6 126 aa7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 OR6C65A6NJZ3 312 aa7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 EFCAB9A8MZ26 197 aa7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 M0R3H8 397 aa7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 NME4O00746 187 aa7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 AKAP8O43823 692 aaKnown RBP7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 OR2T1O43869 369 aa7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 SLC43A1O75387 559 aa7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 INMTO95050 263 aa7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 PAHP00439 452 aa7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 OPN1SWP03999 348 aa7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 MTPNP58546 118 aa7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 ISL1P61371 349 aa7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 EMX1Q04741 257 aaPredicted RBP7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 NFYCQ13952 458 aa7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 OR1Q1Q15612 314 aa7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 ULK3Q6PHR2 472 aa7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 C5orf46Q6UWT4 87 aa7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 CCDC190Q86UF4 302 aa7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 RANBP3LQ86VV4 465 aaPredicted RBP7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 PARP16Q8N5Y8 322 aa7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 C11orf65Q8NCR3 313 aa7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 TAAR8Q969N4 342 aa7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 SLC47A1Q96FL8 570 aa7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 EPYCQ99645 322 aa7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 KCNS3Q9BQ31 491 aa7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 WFDC6Q9BQY6 131 aa7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 LINC00470Q9BZP3 86 aa7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 DCSTAMPQ9H295 470 aa7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 OBP2BQ9NPH6 170 aa7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 ZC4H2Q9NQZ6 224 aa7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 B3GAT1Q9P2W7 334 aa7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 MAGEL2Q9UJ55 1249 aa7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 MOKQ9UQ07 419 aa7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 RCE1Q9Y256 329 aa7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 NF1P21359 2839 aa7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 ANK3Q12955 4377 aaKnown RBP7.45□□□□□ -1.22
SFSWAP-202ENST00000535202 FN1P02751 2386 aaKnown RBP7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 IGHV4-30-2A0A087WSY4 118 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 A0A087WUJ7 227 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 A0A0B4J2E0 115 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 A0A1B0GX12 115 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 MEIOCA2RUB1 952 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 TRAF3IP2O43734 574 aaPredicted RBP7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 FZD7O75084 574 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 B3GALNT1O75752 331 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 SNAPC5O75971 98 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 TP53P04637 393 aaPredicted RBP7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 RAP2AP10114 183 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 PSKH1P11801 424 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 APOBEC3AP31941 199 aaPredicted RBP7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 YAP1P46937 504 aaKnown RBP7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 SLC35A2P78381 396 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 TEKQ02763 1124 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 CHRNB3Q05901 458 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 KRTAP1-1Q07627 177 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 ASAH1Q13510 395 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms