RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 UNC119BA6NIH7 251 aa8.93□□□□□ -0.98
CAPN1-225ENST00000533704 RNF212BA8MTL3 300 aa8.93□□□□□ -0.98
CAPN1-225ENST00000533704 C12orf71A8MTZ7 269 aa8.93□□□□□ -0.98
CAPN1-225ENST00000533704 C17orf100A8MU93 164 aa8.93□□□□□ -0.98
CAPN1-225ENST00000533704 PPIHO43447 177 aaKnown RBP8.93□□□□□ -0.98
CAPN1-225ENST00000533704 NDUFB2O95178 105 aa8.93□□□□□ -0.98
CAPN1-225ENST00000533704 MT-ND5P03915 603 aa8.93□□□□□ -0.98
CAPN1-225ENST00000533704 CST2P09228 141 aa8.93□□□□□ -0.98
CAPN1-225ENST00000533704 TACSTD2P09758 323 aa8.93□□□□□ -0.98
CAPN1-225ENST00000533704 ZNF250P15622 560 aa8.93□□□□□ -0.98
CAPN1-225ENST00000533704 ZNF26P17031 533 aaPredicted RBP8.93□□□□□ -0.98
CAPN1-225ENST00000533704 SRD5A1P18405 259 aa8.93□□□□□ -0.98
CAPN1-225ENST00000533704 HNF1AP20823 631 aa8.93□□□□□ -0.98
CAPN1-225ENST00000533704 WNT5AP41221 380 aa8.93□□□□□ -0.98
CAPN1-225ENST00000533704 CENPAP49450 140 aa8.93□□□□□ -0.98
CAPN1-225ENST00000533704 CCL8P80075 99 aa8.93□□□□□ -0.98
CAPN1-225ENST00000533704 RIN1Q13671 783 aa8.93□□□□□ -0.98
CAPN1-225ENST00000533704 DGCR6Q14129 220 aa8.93□□□□□ -0.98
CAPN1-225ENST00000533704 SEC23BQ15437 767 aa8.93□□□□□ -0.98
CAPN1-225ENST00000533704 ZNF718Q3SXZ3 478 aa8.93□□□□□ -0.98
CAPN1-225ENST00000533704 MESTQ5EB52 335 aa8.93□□□□□ -0.98
CAPN1-225ENST00000533704 SAMD4BQ5PRF9 694 aaKnown RBP8.93□□□□□ -0.98
CAPN1-225ENST00000533704 FAM120AOSQ5T036 256 aa8.93□□□□□ -0.98
CAPN1-225ENST00000533704 RFPL4BQ6ZWI9 263 aa8.93□□□□□ -0.98
CAPN1-225ENST00000533704 CXXC5Q7LFL8 322 aaKnown RBP8.93□□□□□ -0.98
CAPN1-225ENST00000533704 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.93□□□□□ -0.98
CAPN1-225ENST00000533704 ZNF101Q8IZC7 436 aa8.93□□□□□ -0.98
CAPN1-225ENST00000533704 SLC25A40Q8TBP6 338 aa8.93□□□□□ -0.98
CAPN1-225ENST00000533704 MCUR1Q96AQ8 359 aa8.93□□□□□ -0.98
CAPN1-225ENST00000533704 PYURFQ96I23 114 aa8.93□□□□□ -0.98
CAPN1-225ENST00000533704 POM121L2Q96KW2 1035 aa8.93□□□□□ -0.98
CAPN1-225ENST00000533704 C7orf34Q96L11 122 aa8.93□□□□□ -0.98
CAPN1-225ENST00000533704 NSMCE2Q96MF7 247 aa8.93□□□□□ -0.98
CAPN1-225ENST00000533704 LRRC37BQ96QE4 947 aa8.93□□□□□ -0.98
CAPN1-225ENST00000533704 CDRT15Q96T59 188 aa8.93□□□□□ -0.98
CAPN1-225ENST00000533704 KRCC1Q9NPI7 259 aaPredicted RBP8.93□□□□□ -0.98
CAPN1-225ENST00000533704 POLE4Q9NR33 117 aa8.93□□□□□ -0.98
CAPN1-225ENST00000533704 ZNF275Q9NSD4 429 aaPredicted RBP8.93□□□□□ -0.98
CAPN1-225ENST00000533704 TMEM160Q9NX00 188 aa8.93□□□□□ -0.98
CAPN1-225ENST00000533704 TAGLN3Q9UI15 199 aa8.93□□□□□ -0.98
CAPN1-225ENST00000533704 MAGEL2Q9UJ55 1249 aa8.93□□□□□ -0.98
CAPN1-225ENST00000533704 ARL2BPQ9Y2Y0 163 aa8.93□□□□□ -0.98
CAPN1-225ENST00000533704 TIMM10BQ9Y5J6 103 aa8.93□□□□□ -0.98
CAPN1-225ENST00000533704 TANC2Q9HCD6 1990 aa8.93□□□□□ -0.98
CAPN1-225ENST00000533704 DYSFO75923 2080 aa8.93□□□□□ -0.98
CAPN1-225ENST00000533704 MXRA5Q9NR99 2828 aa8.93□□□□□ -0.98
CAPN1-225ENST00000533704 IGLV3-9A0A075B6K5 115 aa8.92□□□□□ -0.98
CAPN1-225ENST00000533704 PRSS37A4D1T9 235 aa8.92□□□□□ -0.98
CAPN1-225ENST00000533704 IMPA2O14732 288 aa8.92□□□□□ -0.98
CAPN1-225ENST00000533704 ARPC2O15144 300 aa8.92□□□□□ -0.98
CAPN1-225ENST00000533704 SPRY3O43610 288 aa8.92□□□□□ -0.98
CAPN1-225ENST00000533704 DOK2O60496 412 aa8.92□□□□□ -0.98
CAPN1-225ENST00000533704 SLC16A7O60669 478 aa8.92□□□□□ -0.98
CAPN1-225ENST00000533704 DCTN3O75935 186 aa8.92□□□□□ -0.98
CAPN1-225ENST00000533704 GADD45GO95257 159 aa8.92□□□□□ -0.98
CAPN1-225ENST00000533704 PPP1R3DO95685 299 aa8.92□□□□□ -0.98
CAPN1-225ENST00000533704 SCG5P05408 212 aa8.92□□□□□ -0.98
CAPN1-225ENST00000533704 HSD17B1P14061 328 aa8.92□□□□□ -0.98
CAPN1-225ENST00000533704 CTLA4P16410 223 aa8.92□□□□□ -0.98
CAPN1-225ENST00000533704 ITGA2P17301 1181 aa8.92□□□□□ -0.98
CAPN1-225ENST00000533704 ACHEP22303 614 aa8.92□□□□□ -0.98
CAPN1-225ENST00000533704 MPV17P39210 176 aa8.92□□□□□ -0.98
CAPN1-225ENST00000533704 OMPP47874 163 aa8.92□□□□□ -0.98
CAPN1-225ENST00000533704 HTR5AP47898 357 aa8.92□□□□□ -0.98
CAPN1-225ENST00000533704 PPP1CBP62140 327 aa8.92□□□□□ -0.98
CAPN1-225ENST00000533704 ENDOGQ14249 297 aaKnown RBP8.92□□□□□ -0.98
CAPN1-225ENST00000533704 MOGQ16653 247 aa8.92□□□□□ -0.98
CAPN1-225ENST00000533704 CR1LQ2VPA4 569 aa8.92□□□□□ -0.98
CAPN1-225ENST00000533704 AVPI1Q5T686 147 aa8.92□□□□□ -0.98
CAPN1-225ENST00000533704 UNQ6126/PRO20091Q6UXV3 157 aa8.92□□□□□ -0.98
CAPN1-225ENST00000533704 THSD4Q6ZMP0 1018 aa8.92□□□□□ -0.98
CAPN1-225ENST00000533704 FOXL2NBQ6ZUU3 175 aa8.92□□□□□ -0.98
CAPN1-225ENST00000533704 DEFB107AQ8IZN7 70 aa8.92□□□□□ -0.98
CAPN1-225ENST00000533704 PGAM4Q8N0Y7 254 aa8.92□□□□□ -0.98
CAPN1-225ENST00000533704 LINC01356Q8N9X3 169 aa8.92□□□□□ -0.98
CAPN1-225ENST00000533704 IPCEF1Q8WWN9 437 aaPredicted RBP8.92□□□□□ -0.98
CAPN1-225ENST00000533704 OR2J1Q9GZK6 312 aa8.92□□□□□ -0.98
CAPN1-225ENST00000533704 SYT4Q9H2B2 425 aa8.92□□□□□ -0.98
CAPN1-225ENST00000533704 GORASP2Q9H8Y8 452 aa8.92□□□□□ -0.98
CAPN1-225ENST00000533704 LPAR2Q9HBW0 351 aa8.92□□□□□ -0.98
CAPN1-225ENST00000533704 DECR2Q9NUI1 292 aa8.92□□□□□ -0.98
CAPN1-225ENST00000533704 TREM2Q9NZC2 230 aa8.92□□□□□ -0.98
CAPN1-225ENST00000533704 SIGLEC7Q9Y286 467 aa8.92□□□□□ -0.98
CAPN1-225ENST00000533704 POLR1DQ9Y2S0 133 aa8.92□□□□□ -0.98
CAPN1-225ENST00000533704 IER3IP1Q9Y5U9 82 aa8.92□□□□□ -0.98
CAPN1-225ENST00000533704 ARHGAP32A7KAX9 2087 aa8.92□□□□□ -0.98
CAPN1-225ENST00000533704 PLSCR5A0PG75 271 aa8.91□□□□□ -0.98
CAPN1-225ENST00000533704 WNT9BO14905 357 aa8.91□□□□□ -0.98
CAPN1-225ENST00000533704 PHF1O43189 567 aaPredicted RBP8.91□□□□□ -0.98
CAPN1-225ENST00000533704 OR10H3O60404 316 aa8.91□□□□□ -0.98
CAPN1-225ENST00000533704 PTP4A3O75365 173 aa8.91□□□□□ -0.98
CAPN1-225ENST00000533704 KHDRBS3O75525 346 aaKnown RBP8.91□□□□□ -0.98
CAPN1-225ENST00000533704 MPZL1O95297 269 aa8.91□□□□□ -0.98
CAPN1-225ENST00000533704 ABHD16AO95870 558 aa8.91□□□□□ -0.98
CAPN1-225ENST00000533704 NGFP01138 241 aa8.91□□□□□ -0.98
CAPN1-225ENST00000533704 IGHV3-13P01766 116 aa8.91□□□□□ -0.98
CAPN1-225ENST00000533704 SDHAP31040 664 aa8.91□□□□□ -0.98
CAPN1-225ENST00000533704 SRP14P37108 136 aaKnown RBP8.91□□□□□ -0.98
CAPN1-225ENST00000533704 LIMS1P48059 325 aa8.91□□□□□ -0.98
CAPN1-225ENST00000533704 ZNF81P51508 661 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms