RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 MMP7P09237 267 aaPredicted RBP12.19□□□□□ -0.46
USF1-209ENST00000529476 ZNF32P17041 273 aa12.19□□□□□ -0.46
USF1-209ENST00000529476 LOXP28300 417 aaPredicted RBP12.19□□□□□ -0.46
USF1-209ENST00000529476 GGT2P36268 569 aa12.19□□□□□ -0.46
USF1-209ENST00000529476 IDH3GP51553 393 aaPredicted RBP12.19□□□□□ -0.46
USF1-209ENST00000529476 RAB1AP62820 205 aa12.19□□□□□ -0.46
USF1-209ENST00000529476 TEKQ02763 1124 aa12.19□□□□□ -0.46
USF1-209ENST00000529476 BSPH1Q075Z2 132 aa12.19□□□□□ -0.46
USF1-209ENST00000529476 SLC36A2Q495M3 483 aa12.19□□□□□ -0.46
USF1-209ENST00000529476 BEX5Q5H9J7 111 aa12.19□□□□□ -0.46
USF1-209ENST00000529476 NCMAPQ5T1S8 102 aa12.19□□□□□ -0.46
USF1-209ENST00000529476 BCDIN3DQ7Z5W3 292 aaKnown RBP12.19□□□□□ -0.46
USF1-209ENST00000529476 MYPOPQ86VE0 399 aaPredicted RBP12.19□□□□□ -0.46
USF1-209ENST00000529476 ZNF511Q8NB15 262 aa12.19□□□□□ -0.46
USF1-209ENST00000529476 OR6K6Q8NGW6 343 aa12.19□□□□□ -0.46
USF1-209ENST00000529476 FAM81AQ8TBF8 368 aa12.19□□□□□ -0.46
USF1-209ENST00000529476 TMEM163Q8TC26 289 aa12.19□□□□□ -0.46
USF1-209ENST00000529476 UBE2FQ969M7 185 aa12.19□□□□□ -0.46
USF1-209ENST00000529476 ZNF75AQ96N20 296 aa12.19□□□□□ -0.46
USF1-209ENST00000529476 RDH12Q96NR8 316 aa12.19□□□□□ -0.46
USF1-209ENST00000529476 HS3ST6Q96QI5 342 aa12.19□□□□□ -0.46
USF1-209ENST00000529476 PITX2Q99697 317 aa12.19□□□□□ -0.46
USF1-209ENST00000529476 KCNN2Q9H2S1 579 aa12.19□□□□□ -0.46
USF1-209ENST00000529476 CCNB1IP1Q9NPC3 277 aa12.19□□□□□ -0.46
USF1-209ENST00000529476 MRPL22Q9NWU5 206 aaKnown RBP12.19□□□□□ -0.46
USF1-209ENST00000529476 NDRG4Q9ULP0 352 aaKnown RBP12.19□□□□□ -0.46
USF1-209ENST00000529476 GMPPBQ9Y5P6 360 aa12.19□□□□□ -0.46
USF1-209ENST00000529476 MTORP42345 2549 aa12.18□□□□□ -0.46
USF1-209ENST00000529476 LOC100130705A0A1B0GUX0 176 aa12.18□□□□□ -0.46
USF1-209ENST00000529476 FAM221AA4D161 298 aa12.18□□□□□ -0.46
USF1-209ENST00000529476 C12orf71A8MTZ7 269 aa12.18□□□□□ -0.46
USF1-209ENST00000529476 RAB36O95755 333 aa12.18□□□□□ -0.46
USF1-209ENST00000529476 IGKV3-15P01624 115 aa12.18□□□□□ -0.46
USF1-209ENST00000529476 IGLV1-44P01699 117 aa12.18□□□□□ -0.46
USF1-209ENST00000529476 HRGP04196 525 aa12.18□□□□□ -0.46
USF1-209ENST00000529476 CECR9P0C854 216 aa12.18□□□□□ -0.46
USF1-209ENST00000529476 SLC2A5P22732 501 aa12.18□□□□□ -0.46
USF1-209ENST00000529476 ARR3P36575 388 aa12.18□□□□□ -0.46
USF1-209ENST00000529476 CDC42P60953 191 aa12.18□□□□□ -0.46
USF1-209ENST00000529476 LSM6P62312 80 aaKnown RBP12.18□□□□□ -0.46
USF1-209ENST00000529476 TLE4Q04727 773 aa12.18□□□□□ -0.46
USF1-209ENST00000529476 SPOCK1Q08629 439 aa12.18□□□□□ -0.46
USF1-209ENST00000529476 RAB39AQ14964 217 aa12.18□□□□□ -0.46
USF1-209ENST00000529476 KLHL12Q53G59 568 aa12.18□□□□□ -0.46
USF1-209ENST00000529476 LINC01590Q5TEZ4 76 aa12.18□□□□□ -0.46
USF1-209ENST00000529476 TMEM53Q6P2H8 277 aa12.18□□□□□ -0.46
USF1-209ENST00000529476 TMEM108Q6UXF1 575 aa12.18□□□□□ -0.46
USF1-209ENST00000529476 B3GLCTQ6Y288 498 aa12.18□□□□□ -0.46
USF1-209ENST00000529476 DPPA2Q7Z7J5 298 aa12.18□□□□□ -0.46
USF1-209ENST00000529476 FAM169BQ8N8A8 192 aa12.18□□□□□ -0.46
USF1-209ENST00000529476 OR10H5Q8NGA6 315 aa12.18□□□□□ -0.46
USF1-209ENST00000529476 C14orf79Q96F83 325 aa12.18□□□□□ -0.46
USF1-209ENST00000529476 MS4A3Q96HJ5 214 aa12.18□□□□□ -0.46
USF1-209ENST00000529476 LURAP1Q96LR2 239 aa12.18□□□□□ -0.46
USF1-209ENST00000529476 HEATR1Q9H583 2144 aaKnown RBP12.18□□□□□ -0.46
USF1-209ENST00000529476 ESRP2Q9H6T0 727 aaKnown RBP12.18□□□□□ -0.46
USF1-209ENST00000529476 WDR76Q9H967 626 aa12.18□□□□□ -0.46
USF1-209ENST00000529476 DNHD1Q96M86 4753 aa12.18□□□□□ -0.46
USF1-209ENST00000529476 CADP27708 2225 aa12.17□□□□□ -0.46
USF1-209ENST00000529476 SLC16A6O15403 523 aa12.17□□□□□ -0.46
USF1-209ENST00000529476 PRODHO43272 600 aa12.17□□□□□ -0.46
USF1-209ENST00000529476 CTAG2O75638 210 aa12.17□□□□□ -0.46
USF1-209ENST00000529476 GLCEO94923 617 aa12.17□□□□□ -0.46
USF1-209ENST00000529476 PSKH1P11801 424 aa12.17□□□□□ -0.46
USF1-209ENST00000529476 ZNF14P17017 642 aaPredicted RBP12.17□□□□□ -0.46
USF1-209ENST00000529476 PAX7P23759 505 aa12.17□□□□□ -0.46
USF1-209ENST00000529476 CD40P25942 277 aa12.17□□□□□ -0.46
USF1-209ENST00000529476 FMO3P31513 532 aa12.17□□□□□ -0.46
USF1-209ENST00000529476 NR1H2P55055 460 aa12.17□□□□□ -0.46
USF1-209ENST00000529476 PCBD1P61457 104 aa12.17□□□□□ -0.46
USF1-209ENST00000529476 RPS7P62081 194 aaKnown RBP12.17□□□□□ -0.46
USF1-209ENST00000529476 PSG4Q00888 419 aa12.17□□□□□ -0.46
USF1-209ENST00000529476 APOFQ13790 326 aa12.17□□□□□ -0.46
USF1-209ENST00000529476 PABPC1L2AQ5JQF8 200 aa12.17□□□□□ -0.46
USF1-209ENST00000529476 AADACL4Q5VUY2 407 aa12.17□□□□□ -0.46
USF1-209ENST00000529476 FBXW10Q5XX13 1052 aa12.17□□□□□ -0.46
USF1-209ENST00000529476 CORO6Q6QEF8 472 aa12.17□□□□□ -0.46
USF1-209ENST00000529476 ZNF584Q8IVC4 421 aa12.17□□□□□ -0.46
USF1-209ENST00000529476 LINC00346Q8IVM7 164 aa12.17□□□□□ -0.46
USF1-209ENST00000529476 ZNF555Q8NEP9 628 aa12.17□□□□□ -0.46
USF1-209ENST00000529476 OR8J1Q8NGP2 316 aa12.17□□□□□ -0.46
USF1-209ENST00000529476 AKR7LQ8NHP1 331 aa12.17□□□□□ -0.46
USF1-209ENST00000529476 CYGBQ8WWM9 190 aa12.17□□□□□ -0.46
USF1-209ENST00000529476 ZMYND19Q96E35 227 aaPredicted RBP12.17□□□□□ -0.46
USF1-209ENST00000529476 OR2H1Q9GZK4 316 aa12.17□□□□□ -0.46
USF1-209ENST00000529476 WNT5BQ9H1J7 359 aa12.17□□□□□ -0.46
USF1-209ENST00000529476 VCXQ9H320 206 aa12.17□□□□□ -0.46
USF1-209ENST00000529476 MOV10Q9HCE1 1003 aaKnown RBP12.17□□□□□ -0.46
USF1-209ENST00000529476 RASSF1Q9NS23 344 aa12.17□□□□□ -0.46
USF1-209ENST00000529476 IMPAD1Q9NX62 359 aa12.17□□□□□ -0.46
USF1-209ENST00000529476 ASH2LQ9UBL3 628 aa12.17□□□□□ -0.46
USF1-209ENST00000529476 MOKQ9UQ07 419 aa12.17□□□□□ -0.46
USF1-209ENST00000529476 POLR1DQ9Y2S0 133 aa12.17□□□□□ -0.46
USF1-209ENST00000529476 TIMM10BQ9Y5J6 103 aa12.17□□□□□ -0.46
USF1-209ENST00000529476 LHFPL6Q9Y693 200 aa12.17□□□□□ -0.46
USF1-209ENST00000529476 COMMD3-BMI1R4GMX3 469 aa12.17□□□□□ -0.46
USF1-209ENST00000529476 ABCA4P78363 2273 aa12.16□□□□□ -0.46
USF1-209ENST00000529476 A0A1W2PPR1 153 aa12.16□□□□□ -0.46
USF1-209ENST00000529476 CCDC182A6NF36 153 aa12.16□□□□□ -0.46
USF1-209ENST00000529476 ABCD4O14678 606 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms