RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 MAGEB4O15481 346 aaPredicted RBP13.6□□□□□ -0.23
USP47-207ENST00000527733 OR7C1O76099 320 aaPredicted RBP13.6□□□□□ -0.23
USP47-207ENST00000527733 AKAIN1P0CW23 69 aa13.6□□□□□ -0.23
USP47-207ENST00000527733 CNR1P21554 472 aa13.6□□□□□ -0.23
USP47-207ENST00000527733 HOXA6P31267 233 aa13.6□□□□□ -0.23
USP47-207ENST00000527733 SLC25A1P53007 311 aa13.6□□□□□ -0.23
USP47-207ENST00000527733 HACD4Q5VWC8 232 aa13.6□□□□□ -0.23
USP47-207ENST00000527733 LAX1Q8IWV1 398 aa13.6□□□□□ -0.23
USP47-207ENST00000527733 ATF6BQ99941 703 aa13.6□□□□□ -0.23
USP47-207ENST00000527733 CHRNA10Q9GZZ6 450 aa13.6□□□□□ -0.23
USP47-207ENST00000527733 GLTPQ9NZD2 209 aa13.6□□□□□ -0.23
USP47-207ENST00000527733 DUSP13Q9UII6 198 aa13.6□□□□□ -0.23
USP47-207ENST00000527733 OR2AT4A6NND4 320 aa13.59□□□□□ -0.23
USP47-207ENST00000527733 FTH1P19P0C7X4 201 aa13.59□□□□□ -0.23
USP47-207ENST00000527733 CASP3P42574 277 aa13.59□□□□□ -0.23
USP47-207ENST00000527733 SLC17A1Q14916 467 aa13.59□□□□□ -0.23
USP47-207ENST00000527733 MTFR2Q6P444 385 aa13.59□□□□□ -0.23
USP47-207ENST00000527733 CCDC36Q8IYA8 594 aa13.59□□□□□ -0.23
USP47-207ENST00000527733 NOXO1Q8NFA2 376 aa13.59□□□□□ -0.23
USP47-207ENST00000527733 FLRT3Q9NZU0 649 aa13.59□□□□□ -0.23
USP47-207ENST00000527733 CACNA1IQ9P0X4 2223 aa13.59□□□□□ -0.23
USP47-207ENST00000527733 ARR3P36575 388 aa13.59□□□□□ -0.23
USP47-207ENST00000527733 RPS19P39019 145 aaKnown RBP13.59□□□□□ -0.23
USP47-207ENST00000527733 MVDP53602 400 aa13.59□□□□□ -0.23
USP47-207ENST00000527733 CDK5R1Q15078 307 aa13.59□□□□□ -0.23
USP47-207ENST00000527733 GLYATL3Q5SZD4 288 aa13.59□□□□□ -0.23
USP47-207ENST00000527733 MDGA2Q7Z553 956 aa13.59□□□□□ -0.23
USP47-207ENST00000527733 C17orf47Q8NEP4 570 aa13.59□□□□□ -0.23
USP47-207ENST00000527733 SMAP2Q8WU79 429 aaPredicted RBP13.59□□□□□ -0.23
USP47-207ENST00000527733 SMIM19Q96E16 107 aa13.59□□□□□ -0.23
USP47-207ENST00000527733 PIGBOS1A0A0B4J2F0 54 aa13.59□□□□□ -0.23
USP47-207ENST00000527733 C4orf51C9J302 202 aa13.59□□□□□ -0.23
USP47-207ENST00000527733 K7ESF4 209 aa13.59□□□□□ -0.23
USP47-207ENST00000527733 CDC42EP2O14613 210 aa13.59□□□□□ -0.23
USP47-207ENST00000527733 AKR1C4P17516 323 aa13.59□□□□□ -0.23
USP47-207ENST00000527733 ADH6P28332 368 aa13.59□□□□□ -0.23
USP47-207ENST00000527733 DGAT2L6Q6ZPD8 337 aa13.59□□□□□ -0.23
USP47-207ENST00000527733 TRAPPC6BQ86SZ2 158 aa13.59□□□□□ -0.23
USP47-207ENST00000527733 IQCF2Q8IXL9 164 aa13.59□□□□□ -0.23
USP47-207ENST00000527733 SIGLEC11Q96RL6 698 aa13.59□□□□□ -0.23
USP47-207ENST00000527733 FBXL3Q9UKT7 428 aa13.59□□□□□ -0.23
USP47-207ENST00000527733 RBMX2Q9Y388 322 aaKnown RBP13.59□□□□□ -0.23
USP47-207ENST00000527733 ZNF175Q9Y473 711 aa13.59□□□□□ -0.23
USP47-207ENST00000527733 MEIS3P1A6NDR6 274 aa13.58□□□□□ -0.23
USP47-207ENST00000527733 GPX5O75715 221 aa13.58□□□□□ -0.23
USP47-207ENST00000527733 ZNF806P0C7X5 589 aa13.58□□□□□ -0.23
USP47-207ENST00000527733 TOMM34Q15785 309 aaPredicted RBP13.58□□□□□ -0.23
USP47-207ENST00000527733 SEMA6DQ8NFY4 1073 aa13.58□□□□□ -0.23
USP47-207ENST00000527733 OR51D1Q8NGF3 324 aa13.58□□□□□ -0.23
USP47-207ENST00000527733 TBC1D15Q8TC07 691 aa13.58□□□□□ -0.23
USP47-207ENST00000527733 OPALINQ96PE5 141 aa13.58□□□□□ -0.23
USP47-207ENST00000527733 RAB9BQ9NP90 201 aa13.58□□□□□ -0.23
USP47-207ENST00000527733 ING1Q9UK53 422 aaPredicted RBP13.58□□□□□ -0.23
USP47-207ENST00000527733 PIGLQ9Y2B2 252 aa13.58□□□□□ -0.23
USP47-207ENST00000527733 ETV7Q9Y603 341 aa13.58□□□□□ -0.23
USP47-207ENST00000527733 OR5H15A6NDH6 313 aa13.58□□□□□ -0.24
USP47-207ENST00000527733 TEX46H3BTG2 121 aa13.58□□□□□ -0.24
USP47-207ENST00000527733 RGS19P49795 217 aa13.58□□□□□ -0.24
USP47-207ENST00000527733 MEF2DQ14814 521 aa13.58□□□□□ -0.24
USP47-207ENST00000527733 CEACAM16Q2WEN9 425 aa13.58□□□□□ -0.24
USP47-207ENST00000527733 DCAF10Q5QP82 559 aa13.58□□□□□ -0.24
USP47-207ENST00000527733 THSD4Q6ZMP0 1018 aa13.58□□□□□ -0.24
USP47-207ENST00000527733 SSX6Q7RTT6 188 aa13.58□□□□□ -0.24
USP47-207ENST00000527733 ATG4DQ86TL0 474 aaPredicted RBP13.58□□□□□ -0.24
USP47-207ENST00000527733 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.58□□□□□ -0.24
USP47-207ENST00000527733 PLPP7Q8NBV4 271 aa13.58□□□□□ -0.24
USP47-207ENST00000527733 ALKBH3Q96Q83 286 aaPredicted RBP13.58□□□□□ -0.24
USP47-207ENST00000527733 ABHD6Q9BV23 337 aa13.58□□□□□ -0.24
USP47-207ENST00000527733 A0A096LPE4 126 aa13.58□□□□□ -0.24
USP47-207ENST00000527733 A0A1W2PPZ6 126 aa13.58□□□□□ -0.24
USP47-207ENST00000527733 FOXL2P58012 376 aa13.58□□□□□ -0.24
USP47-207ENST00000527733 SPINK14Q6IE38 97 aa13.58□□□□□ -0.24
USP47-207ENST00000527733 CDH24Q86UP0 819 aa13.58□□□□□ -0.24
USP47-207ENST00000527733 COQ8AQ8NI60 647 aa13.58□□□□□ -0.24
USP47-207ENST00000527733 OR51E1Q8TCB6 317 aa13.58□□□□□ -0.24
USP47-207ENST00000527733 ZNF431Q8TF32 576 aaPredicted RBP13.58□□□□□ -0.24
USP47-207ENST00000527733 TOMM40LQ969M1 308 aa13.58□□□□□ -0.24
USP47-207ENST00000527733 FAM3DQ96BQ1 224 aa13.58□□□□□ -0.24
USP47-207ENST00000527733 MOGAT1Q96PD6 335 aa13.58□□□□□ -0.24
USP47-207ENST00000527733 STEAP1Q9UHE8 339 aa13.58□□□□□ -0.24
USP47-207ENST00000527733 UBE2J1Q9Y385 318 aaPredicted RBP13.58□□□□□ -0.24
USP47-207ENST00000527733 LNP1A1A4G5 178 aa13.58□□□□□ -0.24
USP47-207ENST00000527733 OR2M5A3KFT3 312 aa13.58□□□□□ -0.24
USP47-207ENST00000527733 SFTPBP07988 381 aa13.58□□□□□ -0.24
USP47-207ENST00000527733 ZNF883P0CG24 379 aa13.58□□□□□ -0.24
USP47-207ENST00000527733 IDH3GP51553 393 aaPredicted RBP13.58□□□□□ -0.24
USP47-207ENST00000527733 OR2A2Q6IF42 318 aa13.58□□□□□ -0.24
USP47-207ENST00000527733 EIF5AL1Q6IS14 154 aaKnown RBP13.58□□□□□ -0.24
USP47-207ENST00000527733 OR52H1Q8NGJ2 320 aa13.58□□□□□ -0.24
USP47-207ENST00000527733 DDA1Q9BW61 102 aa13.58□□□□□ -0.24
USP47-207ENST00000527733 MGAT4CQ9UBM8 478 aa13.58□□□□□ -0.24
USP47-207ENST00000527733 GDF2Q9UK05 429 aaPredicted RBP13.58□□□□□ -0.24
USP47-207ENST00000527733 PCDHGA1Q9Y5H4 931 aa13.58□□□□□ -0.24
USP47-207ENST00000527733 GALR2O43603 387 aaPredicted RBP13.57□□□□□ -0.24
USP47-207ENST00000527733 IFI6P09912 130 aa13.57□□□□□ -0.24
USP47-207ENST00000527733 VEGFCP49767 419 aa13.57□□□□□ -0.24
USP47-207ENST00000527733 CXADRP78310 365 aa13.57□□□□□ -0.24
USP47-207ENST00000527733 SKP2Q13309 424 aa13.57□□□□□ -0.24
USP47-207ENST00000527733 SHBQ15464 509 aa13.57□□□□□ -0.24
USP47-207ENST00000527733 TMEM81Q6P7N7 255 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms