RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 ZNF691Q5VV52 312 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 ZNF813Q6ZN06 617 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 BEND4Q6ZU67 534 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 USP51Q70EK9 711 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 CXXC5Q7LFL8 322 aaKnown RBP5.65□□□□□ -1.5
CD44-214ENST00000525211 SSX6Q7RTT6 188 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 MDP1Q86V88 176 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 JAZF1Q86VZ6 243 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 ZNF584Q8IVC4 421 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 LINC00346Q8IVM7 164 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 TIGD4Q8IY51 512 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 PAQR4Q8N4S7 273 aaPredicted RBP5.65□□□□□ -1.5
CD44-214ENST00000525211 DHRSXQ8N5I4 330 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 PACRGLQ8N7B6 248 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 SLC26A10Q8NG04 563 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 AKR7LQ8NHP1 331 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 RHOXF1Q8NHV9 184 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 TMEM163Q8TC26 289 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 DNAJC9Q8WXX5 260 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 SLC7A6Q92536 515 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 TFAP2CQ92754 450 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 NEUROG1Q92886 237 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 ADI1Q9BV57 179 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 ZNF416Q9BWM5 594 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 TTTY10Q9BZA0 68 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 WNT5BQ9H1J7 359 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 AMBNQ9NP70 447 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 B3GNT2Q9NY97 397 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 TAS2R16Q9NYV7 291 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 CRIM1Q9NZV1 1036 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 KLHL21Q9UJP4 597 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 COPS3Q9UNS2 423 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 GMPPBQ9Y5P6 360 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 LHFPL6Q9Y693 200 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 FBN2P35556 2912 aa5.65□□□□□ -1.51
CD44-214ENST00000525211 PKDREJQ9NTG1 2253 aa5.65□□□□□ -1.51
CD44-214ENST00000525211 ROS1P08922 2347 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 CIB4A0PJX0 185 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 DPRXA6NFQ7 191 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 OR5H1A6NKK0 313 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 RIIAD1A6NNX1 92 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 DEFB108AA8MXU0 73 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 PRR23D1E9PI22 279 aaPredicted RBP5.64□□□□□ -1.51
CD44-214ENST00000525211 XKRYO14609 159 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 RER1O15258 196 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 KHDRBS3O75525 346 aaKnown RBP5.64□□□□□ -1.51
CD44-214ENST00000525211 RENP00797 406 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 PF4P02776 101 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 HMGN1P05114 100 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 MRPL3P09001 348 aaKnown RBP5.64□□□□□ -1.51
CD44-214ENST00000525211 DBHP09172 617 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 PRR23D2P0DMB1 279 aaPredicted RBP5.64□□□□□ -1.51
CD44-214ENST00000525211 CCL2P13500 99 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 PRF1P14222 555 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 ZNF32P17041 273 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 CALCRP30988 508 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 NAA10P41227 235 aaPredicted RBP5.64□□□□□ -1.51
CD44-214ENST00000525211 CENPAP49450 140 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 ZNF83P51522 516 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 RAD23AP54725 363 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 ISL1P61371 349 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 PSG4Q00888 419 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 TEKQ02763 1124 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 RAB39AQ14964 217 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 KLHL12Q53G59 568 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 TMEM255AQ5JRV8 349 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 THEM4Q5T1C6 240 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 FAM205BPQ63HN1 556 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 SP5Q6BEB4 398 aaPredicted RBP5.64□□□□□ -1.51
CD44-214ENST00000525211 RPL13AP3Q6NVV1 102 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 MTFR2Q6P444 385 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 ANKRD16Q6P6B7 361 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 MEX3BQ6ZN04 569 aaKnown RBP5.64□□□□□ -1.51
CD44-214ENST00000525211 CFAP77Q6ZQR2 320 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 ZNF627Q7L945 461 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 ADCK1Q86TW2 530 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 NAA40Q86UY6 237 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 WFDC8Q8IUA0 241 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 DMRTC2Q8IXT2 367 aaPredicted RBP5.64□□□□□ -1.51
CD44-214ENST00000525211 SLC22A24Q8N4F4 322 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 CPEB3Q8NE35 698 aaKnown RBP5.64□□□□□ -1.51
CD44-214ENST00000525211 LILRB1Q8NHL6 650 aaPredicted RBP5.64□□□□□ -1.51
CD44-214ENST00000525211 FBLIM1Q8WUP2 373 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 BOD1Q96IK1 185 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 MAP6Q96JE9 813 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 RHOVQ96L33 236 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 RBP7Q96R05 134 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 SNX18Q96RF0 628 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 TEAD3Q99594 435 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 RACGAP1Q9H0H5 632 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 POFUT1Q9H488 388 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 PNRC2Q9NPJ4 139 aaKnown RBP5.64□□□□□ -1.51
CD44-214ENST00000525211 ELOVL5Q9NYP7 299 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 UBAP1Q9NZ09 502 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 KCNG2Q9UJ96 466 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 BAIAP2Q9UQB8 552 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 FKBP7Q9Y680 259 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 COMMD3-BMI1R4GMX3 469 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 PTPN13Q12923 2485 aa5.64□□□□□ -1.51
CD44-214ENST00000525211 ABCA4P78363 2273 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms