RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 DUSP8Q13202 625 aa7.58□□□□□ -1.2
CSMD1-213ENST00000523488 CENPVQ7Z7K6 275 aaPredicted RBP7.58□□□□□ -1.2
CSMD1-213ENST00000523488 ZNF227Q86WZ6 799 aa7.58□□□□□ -1.2
CSMD1-213ENST00000523488 VRK2Q86Y07 508 aa7.58□□□□□ -1.2
CSMD1-213ENST00000523488 SECTM1Q8WVN6 248 aa7.58□□□□□ -1.2
CSMD1-213ENST00000523488 AQP3Q92482 292 aa7.58□□□□□ -1.2
CSMD1-213ENST00000523488 RELTQ969Z4 430 aa7.58□□□□□ -1.2
CSMD1-213ENST00000523488 ZMYND19Q96E35 227 aaPredicted RBP7.58□□□□□ -1.2
CSMD1-213ENST00000523488 TCTN2Q96GX1 697 aa7.58□□□□□ -1.2
CSMD1-213ENST00000523488 SLC41A3Q96GZ6 507 aa7.58□□□□□ -1.2
CSMD1-213ENST00000523488 C5orf34Q96MH7 638 aa7.58□□□□□ -1.2
CSMD1-213ENST00000523488 LGR4Q9BXB1 951 aa7.58□□□□□ -1.2
CSMD1-213ENST00000523488 C19orf12Q9NSK7 152 aa7.58□□□□□ -1.2
CSMD1-213ENST00000523488 GDF2Q9UK05 429 aaPredicted RBP7.58□□□□□ -1.2
CSMD1-213ENST00000523488 NPIPB15A6NHN6 443 aaPredicted RBP7.57□□□□□ -1.2
CSMD1-213ENST00000523488 PRR19A6NJB7 356 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 MARCH11A6NNE9 402 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 PSMD9O00233 223 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 DCTN6O00399 190 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 TSPAN2O60636 221 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 RPP14O95059 124 aaKnown RBP7.57□□□□□ -1.2
CSMD1-213ENST00000523488 MAS1P04201 325 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 TEAD1P28347 426 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 SPINT3P49223 89 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 ACTBP60709 375 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 ACTG1P63261 375 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 FAM3AP98173 230 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 MAP2K5Q13163 448 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 DHRS2Q13268 280 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 PPA1Q15181 289 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 OR8G1Q15617 311 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 LINC01590Q5TEZ4 76 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 STAC2Q6ZMT1 411 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 THRSPQ92748 146 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 ZNF681Q96N22 645 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 PHB2Q99623 299 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 SPACA1Q9HBV2 294 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 ZNF281Q9Y2X9 895 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 H3BSH0 61 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 M0QYG6 137 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 TSPAN15O95858 294 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 THEGLP0DJG4 465 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 TBPP20226 339 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 RND2P52198 227 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 HSD17B7P56937 341 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 RAC1P63000 192 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 IL13RA1P78552 427 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 CCSMST1Q4G0I0 132 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 OR2A2Q6IF42 318 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 ZNF627Q7L945 461 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 TMEM173Q86WV6 379 aaPredicted RBP7.57□□□□□ -1.2
CSMD1-213ENST00000523488 RFLNBQ8N5W9 214 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 OR51A7Q8NH64 312 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 TMEM255BQ8WV15 326 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 ASB5Q8WWX0 329 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 RRNAD1Q96FB5 475 aaKnown RBP7.57□□□□□ -1.2
CSMD1-213ENST00000523488 CRLF2Q9HC73 371 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 VSX1Q9NZR4 365 aaPredicted RBP7.57□□□□□ -1.2
CSMD1-213ENST00000523488 CALML5Q9NZT1 146 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 NTNG1Q9Y2I2 539 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 MRPS18CQ9Y3D5 142 aaKnown RBP7.57□□□□□ -1.2
CSMD1-213ENST00000523488 CSAG2Q9Y5P2 127 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 CPED1A4D0V7 1026 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 FAM221BA6H8Z2 402 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 TVP23AA6NH52 213 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 SEC14L6B5MCN3 397 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 EIF1AYO14602 144 aaKnown RBP7.57□□□□□ -1.2
CSMD1-213ENST00000523488 SRSF10O75494 262 aaKnown RBP7.57□□□□□ -1.2
CSMD1-213ENST00000523488 DUS4LO95620 317 aaKnown RBP7.57□□□□□ -1.2
CSMD1-213ENST00000523488 CYB5AP00167 134 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 EDN3P14138 238 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 AKR1A1P14550 325 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 SERPINA4P29622 427 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 SNCAP37840 140 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 EIF1AXP47813 144 aaKnown RBP7.57□□□□□ -1.2
CSMD1-213ENST00000523488 SLC25A1P53007 311 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 FOXF1Q12946 379 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 ODF4Q2M2E3 257 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 CATSPERDQ86XM0 798 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 SLC35F3Q8IY50 421 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 C2orf73Q8N5S3 287 aaPredicted RBP7.57□□□□□ -1.2
CSMD1-213ENST00000523488 LMNTD1Q8N9Z9 388 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 CDS1Q92903 461 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 KTI12Q96EK9 354 aaPredicted RBP7.57□□□□□ -1.2
CSMD1-213ENST00000523488 REPIN1Q9BWE0 567 aaKnown RBP7.57□□□□□ -1.2
CSMD1-213ENST00000523488 GLIPR2Q9H4G4 154 aa7.57□□□□□ -1.2
CSMD1-213ENST00000523488 WIPF3A6NGB9 483 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 H0YIZ8 118 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 NUDT21O43809 227 aaKnown RBP7.56□□□□□ -1.2
CSMD1-213ENST00000523488 OR10H2O60403 315 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 BRINP1O60477 761 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 OR2C1O95371 312 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 CLUP10909 449 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 MAKP20794 623 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 PSMB6P28072 239 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 TACR3P29371 465 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 PTGER1P34995 402 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 NCBP2P52298 156 aaKnown RBP eCLIP7.56□□□□□ -1.2
CSMD1-213ENST00000523488 TAS2R19P59542 299 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 MRPS6P82932 125 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms