RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 OR4C13Q8NGP0 309 aa11.39□□□□□ -0.59
NKX3-1-202ENST00000523261 OR5R1Q8NH85 324 aa11.39□□□□□ -0.59
NKX3-1-202ENST00000523261 AGR3Q8TD06 166 aa11.39□□□□□ -0.59
NKX3-1-202ENST00000523261 SLC35B4Q969S0 331 aa11.39□□□□□ -0.59
NKX3-1-202ENST00000523261 TEX37Q96LM6 180 aa11.39□□□□□ -0.59
NKX3-1-202ENST00000523261 TECTBQ96PL2 329 aa11.39□□□□□ -0.59
NKX3-1-202ENST00000523261 POFUT1Q9H488 388 aa11.39□□□□□ -0.59
NKX3-1-202ENST00000523261 CNTD2Q9H8S5 307 aa11.39□□□□□ -0.59
NKX3-1-202ENST00000523261 ELOVL3Q9HB03 270 aa11.39□□□□□ -0.59
NKX3-1-202ENST00000523261 CCNB1IP1Q9NPC3 277 aa11.39□□□□□ -0.59
NKX3-1-202ENST00000523261 ASIC5Q9NY37 505 aa11.39□□□□□ -0.59
NKX3-1-202ENST00000523261 ZNF232Q9UNY5 417 aa11.39□□□□□ -0.59
NKX3-1-202ENST00000523261 E9PQ18 207 aa11.38□□□□□ -0.59
NKX3-1-202ENST00000523261 OPN1SWP03999 348 aa11.38□□□□□ -0.59
NKX3-1-202ENST00000523261 HTR2AP28223 471 aa11.38□□□□□ -0.59
NKX3-1-202ENST00000523261 NPY4RP50391 375 aa11.38□□□□□ -0.59
NKX3-1-202ENST00000523261 ARHGDIAP52565 204 aa11.38□□□□□ -0.59
NKX3-1-202ENST00000523261 ARF6P62330 175 aa11.38□□□□□ -0.59
NKX3-1-202ENST00000523261 PSG4Q00888 419 aa11.38□□□□□ -0.59
NKX3-1-202ENST00000523261 EMX2Q04743 252 aa11.38□□□□□ -0.59
NKX3-1-202ENST00000523261 MELKQ14680 651 aa11.38□□□□□ -0.59
NKX3-1-202ENST00000523261 TAF11Q15544 211 aa11.38□□□□□ -0.59
NKX3-1-202ENST00000523261 HIST3H3Q16695 136 aa11.38□□□□□ -0.59
NKX3-1-202ENST00000523261 ZNF181Q2M3W8 571 aa11.38□□□□□ -0.59
NKX3-1-202ENST00000523261 PDCD4Q53EL6 469 aaKnown RBP11.38□□□□□ -0.59
NKX3-1-202ENST00000523261 ALG10BQ5I7T1 473 aa11.38□□□□□ -0.59
NKX3-1-202ENST00000523261 RPS26P11Q5JNZ5 115 aaPredicted RBP11.38□□□□□ -0.59
NKX3-1-202ENST00000523261 CCDC63Q8NA47 563 aa11.38□□□□□ -0.59
NKX3-1-202ENST00000523261 PNLDC1Q8NA58 520 aaKnown RBP11.38□□□□□ -0.59
NKX3-1-202ENST00000523261 PAPD5Q8NDF8 572 aaKnown RBP11.38□□□□□ -0.59
NKX3-1-202ENST00000523261 OR2T6Q8NHC8 308 aa11.38□□□□□ -0.59
NKX3-1-202ENST00000523261 MUC7Q8TAX7 377 aa11.38□□□□□ -0.59
NKX3-1-202ENST00000523261 DNAJA4Q8WW22 397 aaPredicted RBP11.38□□□□□ -0.59
NKX3-1-202ENST00000523261 MCHR2Q969V1 340 aa11.38□□□□□ -0.59
NKX3-1-202ENST00000523261 TUBGCP3Q96CW5 907 aa11.38□□□□□ -0.59
NKX3-1-202ENST00000523261 MEGF10Q96KG7 1140 aa11.38□□□□□ -0.59
NKX3-1-202ENST00000523261 C4orf45Q96LM5 186 aa11.38□□□□□ -0.59
NKX3-1-202ENST00000523261 CCDC115Q96NT0 180 aa11.38□□□□□ -0.59
NKX3-1-202ENST00000523261 EPYCQ99645 322 aa11.38□□□□□ -0.59
NKX3-1-202ENST00000523261 CITED2Q99967 270 aaPredicted RBP11.38□□□□□ -0.59
NKX3-1-202ENST00000523261 ARMC7Q9H6L4 198 aa11.38□□□□□ -0.59
NKX3-1-202ENST00000523261 MKS1Q9NXB0 559 aa11.38□□□□□ -0.59
NKX3-1-202ENST00000523261 CALML5Q9NZT1 146 aa11.38□□□□□ -0.59
NKX3-1-202ENST00000523261 P2RX2Q9UBL9 471 aa11.38□□□□□ -0.59
NKX3-1-202ENST00000523261 CTSZQ9UBR2 303 aa11.38□□□□□ -0.59
NKX3-1-202ENST00000523261 CAB39Q9Y376 341 aaPredicted RBP11.38□□□□□ -0.59
NKX3-1-202ENST00000523261 A0A1W2PPM1 405 aa11.37□□□□□ -0.59
NKX3-1-202ENST00000523261 CCDC154A6NI56 674 aa11.37□□□□□ -0.59
NKX3-1-202ENST00000523261 GSTM3P21266 225 aa11.37□□□□□ -0.59
NKX3-1-202ENST00000523261 RPL4P36578 427 aaKnown RBP11.37□□□□□ -0.59
NKX3-1-202ENST00000523261 PMELP40967 661 aa11.37□□□□□ -0.59
NKX3-1-202ENST00000523261 ZNF84P51523 738 aa11.37□□□□□ -0.59
NKX3-1-202ENST00000523261 CRISP3P54108 245 aa11.37□□□□□ -0.59
NKX3-1-202ENST00000523261 EGFEM1PQ0D2K5 195 aa11.37□□□□□ -0.59
NKX3-1-202ENST00000523261 MAD2L1Q13257 205 aaPredicted RBP11.37□□□□□ -0.59
NKX3-1-202ENST00000523261 PCLAFQ15004 111 aa11.37□□□□□ -0.59
NKX3-1-202ENST00000523261 SPANXN4Q5MJ08 99 aa11.37□□□□□ -0.59
NKX3-1-202ENST00000523261 C10orf53Q8N6V4 93 aa11.37□□□□□ -0.59
NKX3-1-202ENST00000523261 OR5J2Q8NH18 312 aa11.37□□□□□ -0.59
NKX3-1-202ENST00000523261 SLC38A5Q8WUX1 472 aa11.37□□□□□ -0.59
NKX3-1-202ENST00000523261 TESCQ96BS2 214 aa11.37□□□□□ -0.59
NKX3-1-202ENST00000523261 ZNF347Q96SE7 839 aa11.37□□□□□ -0.59
NKX3-1-202ENST00000523261 TSPYL1Q9H0U9 437 aa11.37□□□□□ -0.59
NKX3-1-202ENST00000523261 WNT5BQ9H1J7 359 aa11.37□□□□□ -0.59
NKX3-1-202ENST00000523261 KCNN2Q9H2S1 579 aa11.37□□□□□ -0.59
NKX3-1-202ENST00000523261 SIAEQ9HAT2 523 aa11.37□□□□□ -0.59
NKX3-1-202ENST00000523261 TBK1Q9UHD2 729 aa11.37□□□□□ -0.59
NKX3-1-202ENST00000523261 IGHV3-64DA0A0J9YX35 117 aa11.36□□□□□ -0.59
NKX3-1-202ENST00000523261 TRIM13O60858 407 aa11.36□□□□□ -0.59
NKX3-1-202ENST00000523261 BCHEP06276 602 aa11.36□□□□□ -0.59
NKX3-1-202ENST00000523261 ERFP50548 548 aa11.36□□□□□ -0.59
NKX3-1-202ENST00000523261 MRPS34P82930 218 aaKnown RBP11.36□□□□□ -0.59
NKX3-1-202ENST00000523261 DMRTC1Q5HYR2 192 aa11.36□□□□□ -0.59
NKX3-1-202ENST00000523261 FAM91A1Q658Y4 838 aa11.36□□□□□ -0.59
NKX3-1-202ENST00000523261 ULK3Q6PHR2 472 aa11.36□□□□□ -0.59
NKX3-1-202ENST00000523261 MOGAT3Q86VF5 341 aa11.36□□□□□ -0.59
NKX3-1-202ENST00000523261 C1orf87Q8N0U7 546 aa11.36□□□□□ -0.59
NKX3-1-202ENST00000523261 ATG16L2Q8NAA4 619 aa11.36□□□□□ -0.59
NKX3-1-202ENST00000523261 NPEPL1Q8NDH3 523 aa11.36□□□□□ -0.59
NKX3-1-202ENST00000523261 OR10AD1Q8NGE0 317 aa11.36□□□□□ -0.59
NKX3-1-202ENST00000523261 NPRL2Q8WTW4 380 aa11.36□□□□□ -0.59
NKX3-1-202ENST00000523261 NABP1Q96AH0 204 aa11.36□□□□□ -0.59
NKX3-1-202ENST00000523261 CMBLQ96DG6 245 aa11.36□□□□□ -0.59
NKX3-1-202ENST00000523261 RANBP3Q9H6Z4 567 aaPredicted RBP11.36□□□□□ -0.59
NKX3-1-202ENST00000523261 BTNL2Q9UIR0 455 aa11.36□□□□□ -0.59
NKX3-1-202ENST00000523261 IFT52Q9Y366 437 aa11.36□□□□□ -0.59
NKX3-1-202ENST00000523261 LRRC30A6NM36 301 aa11.35□□□□□ -0.59
NKX3-1-202ENST00000523261 OR6A2O95222 327 aa11.35□□□□□ -0.59
NKX3-1-202ENST00000523261 IGHG1P01857 330 aa11.35□□□□□ -0.59
NKX3-1-202ENST00000523261 ABHD2P08910 425 aa11.35□□□□□ -0.59
NKX3-1-202ENST00000523261 CDAP32320 146 aa11.35□□□□□ -0.59
NKX3-1-202ENST00000523261 CDKN2CP42773 168 aa11.35□□□□□ -0.59
NKX3-1-202ENST00000523261 ZNF133P52736 654 aaPredicted RBP11.35□□□□□ -0.59
NKX3-1-202ENST00000523261 MVDP53602 400 aa11.35□□□□□ -0.59
NKX3-1-202ENST00000523261 CLRN1P58418 232 aa11.35□□□□□ -0.59
NKX3-1-202ENST00000523261 ERVK-25P63136 954 aa11.35□□□□□ -0.59
NKX3-1-202ENST00000523261 C10orf128Q5T292 105 aa11.35□□□□□ -0.59
NKX3-1-202ENST00000523261 RNF144BQ7Z419 303 aa11.35□□□□□ -0.59
NKX3-1-202ENST00000523261 VMO1Q7Z5L0 202 aa11.35□□□□□ -0.59
NKX3-1-202ENST00000523261 CNPY4Q8N129 248 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms