RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 ALKBH6Q3KRA9 238 aa7.95□□□□□ -1.14
SDC2-207ENST00000522911 ANKDD1AQ495B1 522 aa7.95□□□□□ -1.14
SDC2-207ENST00000522911 TMEM255AQ5JRV8 349 aa7.95□□□□□ -1.14
SDC2-207ENST00000522911 THEM4Q5T1C6 240 aa7.95□□□□□ -1.14
SDC2-207ENST00000522911 AVPI1Q5T686 147 aa7.95□□□□□ -1.14
SDC2-207ENST00000522911 FAM205BPQ63HN1 556 aa7.95□□□□□ -1.14
SDC2-207ENST00000522911 SLC25A47Q6Q0C1 308 aa7.95□□□□□ -1.14
SDC2-207ENST00000522911 TRPM8Q7Z2W7 1104 aa7.95□□□□□ -1.14
SDC2-207ENST00000522911 CALHM3Q86XJ0 350 aa7.95□□□□□ -1.14
SDC2-207ENST00000522911 ALDH16A1Q8IZ83 802 aa7.95□□□□□ -1.14
SDC2-207ENST00000522911 BPIFB2Q8N4F0 458 aa7.95□□□□□ -1.14
SDC2-207ENST00000522911 ZNF283Q8N7M2 679 aa7.95□□□□□ -1.14
SDC2-207ENST00000522911 DEFB108BQ8NET1 73 aa7.95□□□□□ -1.14
SDC2-207ENST00000522911 LRRC8CQ8TDW0 803 aa7.95□□□□□ -1.14
SDC2-207ENST00000522911 IPCEF1Q8WWN9 437 aaPredicted RBP7.95□□□□□ -1.14
SDC2-207ENST00000522911 TAMM41Q96BW9 452 aa7.95□□□□□ -1.14
SDC2-207ENST00000522911 SAMD8Q96LT4 415 aa7.95□□□□□ -1.14
SDC2-207ENST00000522911 SLC6A7Q99884 636 aa7.95□□□□□ -1.14
SDC2-207ENST00000522911 GAL3ST1Q99999 423 aa7.95□□□□□ -1.14
SDC2-207ENST00000522911 C7orf69Q9H7B7 122 aa7.95□□□□□ -1.14
SDC2-207ENST00000522911 NANOGQ9H9S0 305 aa7.95□□□□□ -1.14
SDC2-207ENST00000522911 CCNB1IP1Q9NPC3 277 aa7.95□□□□□ -1.14
SDC2-207ENST00000522911 DDX28Q9NUL7 540 aaKnown RBP7.95□□□□□ -1.14
SDC2-207ENST00000522911 MRGBPQ9NV56 204 aa7.95□□□□□ -1.14
SDC2-207ENST00000522911 TBCCD1Q9NVR7 557 aa7.95□□□□□ -1.14
SDC2-207ENST00000522911 PLEK2Q9NYT0 353 aa7.95□□□□□ -1.14
SDC2-207ENST00000522911 BAG5Q9UL15 447 aa7.95□□□□□ -1.14
SDC2-207ENST00000522911 CACNG2Q9Y698 323 aa7.95□□□□□ -1.14
SDC2-207ENST00000522911 WNK2Q9Y3S1 2297 aa7.95□□□□□ -1.14
SDC2-207ENST00000522911 C5orf49A4QMS7 147 aa7.94□□□□□ -1.14
SDC2-207ENST00000522911 ZSCAN5BA6NJL1 495 aa7.94□□□□□ -1.14
SDC2-207ENST00000522911 POM121CA8CG34 1229 aa7.94□□□□□ -1.14
SDC2-207ENST00000522911 F5H0A9 414 aaPredicted RBP7.94□□□□□ -1.14
SDC2-207ENST00000522911 IFNL4K9M1U5 179 aa7.94□□□□□ -1.14
SDC2-207ENST00000522911 ANGPT2O15123 496 aa7.94□□□□□ -1.14
SDC2-207ENST00000522911 AHCYL1O43865 530 aa7.94□□□□□ -1.14
SDC2-207ENST00000522911 OPN1SWP03999 348 aa7.94□□□□□ -1.14
SDC2-207ENST00000522911 F13BP05160 661 aa7.94□□□□□ -1.14
SDC2-207ENST00000522911 UMPSP11172 480 aa7.94□□□□□ -1.14
SDC2-207ENST00000522911 ZNF12P17014 697 aa7.94□□□□□ -1.14
SDC2-207ENST00000522911 FUT1P19526 365 aa7.94□□□□□ -1.14
SDC2-207ENST00000522911 MAKP20794 623 aa7.94□□□□□ -1.14
SDC2-207ENST00000522911 KITLGP21583 273 aa7.94□□□□□ -1.14
SDC2-207ENST00000522911 MPV17P39210 176 aa7.94□□□□□ -1.14
SDC2-207ENST00000522911 GDI2P50395 445 aaKnown RBP7.94□□□□□ -1.14
SDC2-207ENST00000522911 MTPNP58546 118 aa7.94□□□□□ -1.14
SDC2-207ENST00000522911 PPP1CBP62140 327 aa7.94□□□□□ -1.14
SDC2-207ENST00000522911 SELPLGQ14242 412 aa7.94□□□□□ -1.14
SDC2-207ENST00000522911 COQ5Q5HYK3 327 aa7.94□□□□□ -1.14
SDC2-207ENST00000522911 METTL21CQ5VZV1 264 aa7.94□□□□□ -1.14
SDC2-207ENST00000522911 ARL9Q6T311 187 aa7.94□□□□□ -1.14
SDC2-207ENST00000522911 THSD4Q6ZMP0 1018 aa7.94□□□□□ -1.14
SDC2-207ENST00000522911 C9orf139Q6ZV77 190 aa7.94□□□□□ -1.14
SDC2-207ENST00000522911 LRRC28Q86X40 367 aaPredicted RBP7.94□□□□□ -1.14
SDC2-207ENST00000522911 LRRC18Q8N456 261 aa7.94□□□□□ -1.14
SDC2-207ENST00000522911 SPICQ8N5J4 248 aa7.94□□□□□ -1.14
SDC2-207ENST00000522911 NPEPL1Q8NDH3 523 aa7.94□□□□□ -1.14
SDC2-207ENST00000522911 SLC25A40Q8TBP6 338 aa7.94□□□□□ -1.14
SDC2-207ENST00000522911 ST7LQ8TDW4 575 aa7.94□□□□□ -1.14
SDC2-207ENST00000522911 TMEM239Q8WW34 195 aa7.94□□□□□ -1.14
SDC2-207ENST00000522911 CCL17Q92583 94 aa7.94□□□□□ -1.14
SDC2-207ENST00000522911 GTF3AQ92664 365 aaKnown RBP7.94□□□□□ -1.14
SDC2-207ENST00000522911 HDAC2Q92769 488 aaKnown RBP7.94□□□□□ -1.14
SDC2-207ENST00000522911 SGTBQ96EQ0 304 aa7.94□□□□□ -1.14
SDC2-207ENST00000522911 SH3GL1Q99961 368 aa7.94□□□□□ -1.14
SDC2-207ENST00000522911 SIKE1Q9BRV8 207 aa7.94□□□□□ -1.14
SDC2-207ENST00000522911 OR2J1Q9GZK6 312 aa7.94□□□□□ -1.14
SDC2-207ENST00000522911 WNT5BQ9H1J7 359 aa7.94□□□□□ -1.14
SDC2-207ENST00000522911 ATPIF1Q9UII2 106 aa7.94□□□□□ -1.14
SDC2-207ENST00000522911 PURGQ9UJV8 347 aaKnown RBP7.94□□□□□ -1.14
SDC2-207ENST00000522911 NUP50Q9UKX7 468 aa7.94□□□□□ -1.14
SDC2-207ENST00000522911 ARL2BPQ9Y2Y0 163 aa7.94□□□□□ -1.14
SDC2-207ENST00000522911 TIMM10BQ9Y5J6 103 aa7.94□□□□□ -1.14
SDC2-207ENST00000522911 NPTNQ9Y639 398 aa7.94□□□□□ -1.14
SDC2-207ENST00000522911 TANC2Q9HCD6 1990 aa7.93□□□□□ -1.14
SDC2-207ENST00000522911 IGKV1D-43A0A0B4J1Z2 117 aa7.93□□□□□ -1.14
SDC2-207ENST00000522911 KPNA4O00629 521 aaPredicted RBP7.93□□□□□ -1.14
SDC2-207ENST00000522911 TPD52L2O43399 206 aaKnown RBP7.93□□□□□ -1.14
SDC2-207ENST00000522911 SLC2A10O95528 541 aa7.93□□□□□ -1.14
SDC2-207ENST00000522911 RNASE1P07998 156 aaKnown RBP7.93□□□□□ -1.14
SDC2-207ENST00000522911 TNFRSF1AP19438 455 aa7.93□□□□□ -1.14
SDC2-207ENST00000522911 AQP2P41181 271 aa7.93□□□□□ -1.14
SDC2-207ENST00000522911 SLC6A9P48067 706 aa7.93□□□□□ -1.14
SDC2-207ENST00000522911 ARHGDIAP52565 204 aa7.93□□□□□ -1.14
SDC2-207ENST00000522911 RPL27P61353 136 aaKnown RBP7.93□□□□□ -1.14
SDC2-207ENST00000522911 ZNF154Q13106 437 aa7.93□□□□□ -1.14
SDC2-207ENST00000522911 TSTQ16762 297 aaKnown RBP7.93□□□□□ -1.14
SDC2-207ENST00000522911 MTX3Q5HYI7 312 aa7.93□□□□□ -1.14
SDC2-207ENST00000522911 RFPL4BQ6ZWI9 263 aa7.93□□□□□ -1.14
SDC2-207ENST00000522911 NKAIN4Q8IVV8 208 aa7.93□□□□□ -1.14
SDC2-207ENST00000522911 OR8J3Q8NGG0 315 aa7.93□□□□□ -1.14
SDC2-207ENST00000522911 OR10A6Q8NH74 314 aa7.93□□□□□ -1.14
SDC2-207ENST00000522911 VANGL1Q8TAA9 524 aaPredicted RBP7.93□□□□□ -1.14
SDC2-207ENST00000522911 SLC26A7Q8TE54 656 aa7.93□□□□□ -1.14
SDC2-207ENST00000522911 COG8Q96MW5 612 aa7.93□□□□□ -1.14
SDC2-207ENST00000522911 RAB3IPQ96QF0 476 aaPredicted RBP7.93□□□□□ -1.14
SDC2-207ENST00000522911 RBP7Q96R05 134 aa7.93□□□□□ -1.14
SDC2-207ENST00000522911 ELAC2Q9BQ52 826 aaKnown RBP7.93□□□□□ -1.14
SDC2-207ENST00000522911 OR2H1Q9GZK4 316 aa7.93□□□□□ -1.14
SDC2-207ENST00000522911 SLITRK2Q9H156 845 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms