RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 TEX47Q8TBZ9 253 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 ACTL9Q8TC94 416 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 HGDQ93099 445 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 PTH2Q96A98 100 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 EEF1AKMT3Q96AZ1 226 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 CREB3L1Q96BA8 519 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 DGCR14Q96DF8 476 aaKnown RBP3.3□□□□□ -1.88
SKP1-209ENST00000522552 ADTRPQ96IZ2 230 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 ZNF488Q96MN9 340 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 COL21A1Q96P44 957 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 TM2D1Q9BX74 207 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 KRTAP3-1Q9BYR8 98 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 TSGA10Q9BZW7 698 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 WDR13Q9H1Z4 485 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 SIAEQ9HAT2 523 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 BABAM2Q9NXR7 383 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 MLXQ9UH92 298 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 SAMD4AQ9UPU9 718 aaKnown RBP3.3□□□□□ -1.88
SKP1-209ENST00000522552 SLC22A13Q9Y226 551 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 GOLT1BQ9Y3E0 138 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 PHF3Q92576 2039 aaKnown RBP3.3□□□□□ -1.88
SKP1-209ENST00000522552 A0A087X1B8 175 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 A0A0B4J2E0 115 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 A0A1B0GUA9 196 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 IQCMA0A1B0GVH7 501 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 A0A1B0GVI7 797 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 A0A1B0GWB2 263 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 A0A1B0GX12 115 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 ZNF705EA8MWA4 302 aaPredicted RBP3.3□□□□□ -1.88
SKP1-209ENST00000522552 E5RI56 91 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 FTCDNL1E5RQL4 147 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 G3V2L1 256 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 H0YJX3 145 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 SMKR1H3BMG3 65 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 DFFAO00273 331 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 SLC31A1O15431 190 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 FGF16O43320 207 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 MPZL2O60487 215 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 IGLV2-14P01704 120 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 FABP1P07148 127 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 HOXC4P09017 264 aaPredicted RBP3.3□□□□□ -1.88
SKP1-209ENST00000522552 RBMY1CP0DJD4 496 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 ZNF35P13682 527 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 PVRP15151 417 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 NQO1P15559 274 aaKnown RBP3.3□□□□□ -1.88
SKP1-209ENST00000522552 GABRG2P18507 467 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 RAB4AP20338 218 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 CMA1P23946 247 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 IGFBP5P24593 272 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 GNRHRP30968 328 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 PDLIM4P50479 330 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 GPM6AP51674 278 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 HCCSP53701 268 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 RHOAP61586 193 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 HMGCS1Q01581 520 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 SLC25A11Q02978 314 aaKnown RBP3.3□□□□□ -1.88
SKP1-209ENST00000522552 ZBED5Q49AG3 693 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 GCSAMLQ5JQS6 135 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 OR10J3Q5JRS4 329 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 WDR38Q5JTN6 314 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 PTAR1Q7Z6K3 402 aaPredicted RBP3.3□□□□□ -1.88
SKP1-209ENST00000522552 PLA2G4DQ86XP0 818 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 CBLN2Q8IUK8 224 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 ZNF557Q8N988 423 aaPredicted RBP3.3□□□□□ -1.88
SKP1-209ENST00000522552 CCDC71LQ8N9Z2 235 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 OR5AP2Q8NGF4 316 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 OR2AE1Q8NHA4 323 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 C16orf52Q8NHV5 167 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 MAPK15Q8TD08 544 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 BLOC1S5Q8TDH9 187 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 DTD1Q8TEA8 209 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 DNASE2BQ8WZ79 361 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 C11orf52Q96A22 123 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 S100PBPQ96BU1 408 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 SGTBQ96EQ0 304 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 PAGE5Q96GU1 130 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 CCDC42Q96M95 316 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 RNF145Q96MT1 663 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 ZNF681Q96N22 645 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 SCGB3A2Q96PL1 93 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 RARRES2Q99969 163 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 KLHDC3Q9BQ90 382 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 PITPNM3Q9BZ71 974 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 BCL2L14Q9BZR8 327 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 CAB39LQ9H9S4 337 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 EXOSC3Q9NQT5 275 aaKnown RBP3.3□□□□□ -1.88
SKP1-209ENST00000522552 C8orf4Q9NR00 106 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 ZNF107Q9UII5 783 aaPredicted RBP3.3□□□□□ -1.88
SKP1-209ENST00000522552 PPP1R3CQ9UQK1 317 aa3.3□□□□□ -1.88
SKP1-209ENST00000522552 ADGRL3Q9HAR2 1447 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 ZNF816-ZNF321PA0A0X1KG74 233 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 A0A1W2PS18 150 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 ZNF233A6NK53 670 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 FAM166BA8MTA8 275 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 ANKRD63C9JTQ0 380 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 H7C2Y5 167 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 NME4O00746 187 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 MAGEB4O15481 346 aaPredicted RBP3.29□□□□□ -1.88
SKP1-209ENST00000522552 TGOLN2O43493 480 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 SHOX2O60902 331 aaPredicted RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms