RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 KRT14P02533 472 aa2.64□□□□□ -1.99
SQLE-202ENST00000518604 FTH1P02794 183 aa2.64□□□□□ -1.99
SQLE-202ENST00000518604 SERPINA5P05154 406 aa2.64□□□□□ -1.99
SQLE-202ENST00000518604 MRPL3P09001 348 aaKnown RBP2.64□□□□□ -1.99
SQLE-202ENST00000518604 MAS1LP35410 378 aa2.64□□□□□ -1.99
SQLE-202ENST00000518604 ZNF138P52744 262 aa2.64□□□□□ -1.99
SQLE-202ENST00000518604 RAB10P61026 200 aa2.64□□□□□ -1.99
SQLE-202ENST00000518604 ESRRGP62508 458 aa2.64□□□□□ -1.99
SQLE-202ENST00000518604 QPRTQ15274 297 aa2.64□□□□□ -1.99
SQLE-202ENST00000518604 SF3A2Q15428 464 aaKnown RBP2.64□□□□□ -1.99
SQLE-202ENST00000518604 PGGHGQ32M88 737 aa2.64□□□□□ -1.99
SQLE-202ENST00000518604 LY6G6FQ5SQ64 297 aa2.64□□□□□ -1.99
SQLE-202ENST00000518604 Q6ZR03 302 aa2.64□□□□□ -1.99
SQLE-202ENST00000518604 TMEM150AQ86TG1 271 aa2.64□□□□□ -1.99
SQLE-202ENST00000518604 PDXPQ96GD0 296 aa2.64□□□□□ -1.99
SQLE-202ENST00000518604 TGS1Q96RS0 853 aaKnown RBP2.64□□□□□ -1.99
SQLE-202ENST00000518604 ZNF430Q9H8G1 570 aaPredicted RBP2.64□□□□□ -1.99
SQLE-202ENST00000518604 HRASLS2Q9NWW9 162 aa2.64□□□□□ -1.99
SQLE-202ENST00000518604 CTSFQ9UBX1 484 aa2.64□□□□□ -1.99
SQLE-202ENST00000518604 TMEM14AQ9Y6G1 99 aa2.64□□□□□ -1.99
SQLE-202ENST00000518604 TMEM150BA6NC51 233 aa2.63□□□□□ -1.99
SQLE-202ENST00000518604 OR2J3O76001 311 aa2.63□□□□□ -1.99
SQLE-202ENST00000518604 ANXA5P08758 320 aa2.63□□□□□ -1.99
SQLE-202ENST00000518604 GDI1P31150 447 aa2.63□□□□□ -1.99
SQLE-202ENST00000518604 CX3CR1P49238 355 aa2.63□□□□□ -1.99
SQLE-202ENST00000518604 VSX2P58304 361 aaPredicted RBP2.63□□□□□ -1.99
SQLE-202ENST00000518604 SRSF5Q13243 272 aaKnown RBP2.63□□□□□ -1.99
SQLE-202ENST00000518604 IRF4Q15306 451 aa2.63□□□□□ -1.99
SQLE-202ENST00000518604 OR7A5Q15622 319 aa2.63□□□□□ -1.99
SQLE-202ENST00000518604 LCE3AQ5TA76 89 aa2.63□□□□□ -1.99
SQLE-202ENST00000518604 Q5W150 140 aa2.63□□□□□ -1.99
SQLE-202ENST00000518604 FBXW9Q5XUX1 488 aa2.63□□□□□ -1.99
SQLE-202ENST00000518604 C22orf42Q6IC83 251 aa2.63□□□□□ -1.99
SQLE-202ENST00000518604 REEP3Q6NUK4 255 aa2.63□□□□□ -1.99
SQLE-202ENST00000518604 ZNF695Q8IW36 515 aa2.63□□□□□ -1.99
SQLE-202ENST00000518604 PRELID2Q8N945 189 aa2.63□□□□□ -1.99
SQLE-202ENST00000518604 OR4A4PQ8NGN8 299 aa2.63□□□□□ -1.99
SQLE-202ENST00000518604 FRZBQ92765 325 aa2.63□□□□□ -1.99
SQLE-202ENST00000518604 MRGPRFQ96AM1 343 aa2.63□□□□□ -1.99
SQLE-202ENST00000518604 DUS3LQ96G46 650 aaKnown RBP2.63□□□□□ -1.99
SQLE-202ENST00000518604 SAV1Q9H4B6 383 aaPredicted RBP2.63□□□□□ -1.99
SQLE-202ENST00000518604 NEK6Q9HC98 313 aa2.63□□□□□ -1.99
SQLE-202ENST00000518604 ZNF355PQ9NSJ1 428 aa2.63□□□□□ -1.99
SQLE-202ENST00000518604 ZNF222Q9UK12 451 aa2.63□□□□□ -1.99
SQLE-202ENST00000518604 PITPNC1Q9UKF7 332 aa2.63□□□□□ -1.99
SQLE-202ENST00000518604 RABL2BQ9UNT1 228 aa2.63□□□□□ -1.99
SQLE-202ENST00000518604 ST3GAL6Q9Y274 331 aa2.63□□□□□ -1.99
SQLE-202ENST00000518604 NOTCH2Q04721 2471 aa2.63□□□□□ -1.99
SQLE-202ENST00000518604 IGSF9BQ9UPX0 1349 aa2.63□□□□□ -1.99
SQLE-202ENST00000518604 ADAMTS13Q76LX8 1427 aa2.62□□□□□ -1.99
SQLE-202ENST00000518604 TRIM64CA6NLI5 447 aa2.62□□□□□ -1.99
SQLE-202ENST00000518604 TCP11X1B4DZS4 312 aa2.62□□□□□ -1.99
SQLE-202ENST00000518604 VAMP5O95183 116 aa2.62□□□□□ -1.99
SQLE-202ENST00000518604 RHOXF2BP0C7M4 288 aa2.62□□□□□ -1.99
SQLE-202ENST00000518604 OR5H8P0DN80 308 aa2.62□□□□□ -1.99
SQLE-202ENST00000518604 EIF2S2P20042 333 aaKnown RBP2.62□□□□□ -1.99
SQLE-202ENST00000518604 DCKP27707 260 aa2.62□□□□□ -1.99
SQLE-202ENST00000518604 STXBP1P61764 594 aaKnown RBP2.62□□□□□ -1.99
SQLE-202ENST00000518604 PON2Q15165 354 aa2.62□□□□□ -1.99
SQLE-202ENST00000518604 RGNQ15493 299 aa2.62□□□□□ -1.99
SQLE-202ENST00000518604 STK11Q15831 433 aa2.62□□□□□ -1.99
SQLE-202ENST00000518604 PTPN20Q4JDL3 420 aa2.62□□□□□ -1.99
SQLE-202ENST00000518604 PPM1LQ5SGD2 360 aa2.62□□□□□ -1.99
SQLE-202ENST00000518604 UBE2UQ5VVX9 321 aa2.62□□□□□ -1.99
SQLE-202ENST00000518604 SLC16A14Q7RTX9 510 aa2.62□□□□□ -1.99
SQLE-202ENST00000518604 ABHD12BQ7Z5M8 362 aaPredicted RBP2.62□□□□□ -1.99
SQLE-202ENST00000518604 TTC5Q8N0Z6 440 aa2.62□□□□□ -1.99
SQLE-202ENST00000518604 NTAN1Q96AB6 310 aa2.62□□□□□ -1.99
SQLE-202ENST00000518604 MYCBPQ99417 103 aaPredicted RBP2.62□□□□□ -1.99
SQLE-202ENST00000518604 CHP1Q99653 195 aa2.62□□□□□ -1.99
SQLE-202ENST00000518604 C20orf24Q9BUV8 137 aa2.62□□□□□ -1.99
SQLE-202ENST00000518604 TMEM165Q9HC07 324 aa2.62□□□□□ -1.99
SQLE-202ENST00000518604 DDX19AQ9NUU7 478 aaKnown RBP2.62□□□□□ -1.99
SQLE-202ENST00000518604 OPN4Q9UHM6 478 aa2.62□□□□□ -1.99
SQLE-202ENST00000518604 LRP4O75096 1905 aa2.62□□□□□ -1.99
SQLE-202ENST00000518604 PTPRTO14522 1441 aa2.61□□□□□ -1.99
SQLE-202ENST00000518604 TRBV9A0A0B4J1U6 114 aa2.61□□□□□ -1.99
SQLE-202ENST00000518604 CTAGE15A4D2H0 777 aa2.61□□□□□ -1.99
SQLE-202ENST00000518604 ZNF705GA8MUZ8 300 aaPredicted RBP2.61□□□□□ -1.99
SQLE-202ENST00000518604 NUPL2O15504 423 aaKnown RBP2.61□□□□□ -1.99
SQLE-202ENST00000518604 ERLIN1O75477 346 aa2.61□□□□□ -1.99
SQLE-202ENST00000518604 PABPC4LP0CB38 370 aaKnown RBP2.61□□□□□ -1.99
SQLE-202ENST00000518604 PMELP40967 661 aa2.61□□□□□ -1.99
SQLE-202ENST00000518604 CSNK1EP49674 416 aaKnown RBP2.61□□□□□ -1.99
SQLE-202ENST00000518604 C21orf59P57076 290 aa2.61□□□□□ -1.99
SQLE-202ENST00000518604 RGS8P57771 180 aaPredicted RBP2.61□□□□□ -1.99
SQLE-202ENST00000518604 LOXL1Q08397 574 aaPredicted RBP2.61□□□□□ -1.99
SQLE-202ENST00000518604 LRRC66Q68CR7 880 aa2.61□□□□□ -1.99
SQLE-202ENST00000518604 TTC23LQ6PF05 361 aa2.61□□□□□ -1.99
SQLE-202ENST00000518604 FBXW12Q6X9E4 464 aa2.61□□□□□ -1.99
SQLE-202ENST00000518604 NTM-AS1Q6ZSK4 140 aa2.61□□□□□ -1.99
SQLE-202ENST00000518604 NCCRP1Q6ZVX7 275 aaPredicted RBP2.61□□□□□ -1.99
SQLE-202ENST00000518604 CENPQQ7L2Z9 268 aaPredicted RBP2.61□□□□□ -1.99
SQLE-202ENST00000518604 SCD5Q86SK9 330 aa2.61□□□□□ -1.99
SQLE-202ENST00000518604 CTAGE6Q86UF2 777 aa2.61□□□□□ -1.99
SQLE-202ENST00000518604 BBS5Q8N3I7 341 aa2.61□□□□□ -1.99
SQLE-202ENST00000518604 MCUR1Q96AQ8 359 aa2.61□□□□□ -1.99
SQLE-202ENST00000518604 CCDC59Q9P031 241 aaKnown RBP2.61□□□□□ -1.99
SQLE-202ENST00000518604 GPATCH8Q9UKJ3 1502 aaKnown RBP2.61□□□□□ -1.99
SQLE-202ENST00000518604 SMCO2A6NFE2 343 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms